Data search


search
Exact
Search

Results for MligTC455_18446

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_18446 73 1.53 Mlig455_036818, Mlig455_053021

Neo: -

Age: -

Region-enriched R4: 8.962/0.01925

HSPB8

Mlig455_036818 {REF} {Length: 2307} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=91.3]; HSP20-like domain found in ArsA [PF17886.3, score=29.5]} {Human: ENSG00000152137, HSPB8, heat shock protein family B (small) member 8, [Score=48.5, Expect=2e-06]} {Mouse: ENSMUSG00000041548, Hspb8, heat shock protein 8, [Score=48.9, Expect=1e-06]} {Dmel: FBgn0011296, l(2)efl, lethal (2) essential for life, [Score=62.4, Expect=1e-11]} {Celegans: WBGene00008592, F08H9.4, [RH, Score=61.2, Expect=1e-11]} {Smed: dd_Smed_v6_5406_0_1, dd_Smed_v6_5406_0_1, [RH, Score=99.8, Expect=8e-25]} {RNA1509_19157} {RNA1310_50408} {RNA815_48338}

Mlig455_053021 {REF} {Length: 2310} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=91.3]; HSP20-like domain found in ArsA [PF17886.3, score=29.5]} {Human: ENSG00000152137, HSPB8, heat shock protein family B (small) member 8, [Score=48.5, Expect=2e-06]} {Mouse: ENSMUSG00000041548, Hspb8, heat shock protein 8, [Score=48.9, Expect=1e-06]} {Dmel: FBgn0011296, l(2)efl, lethal (2) essential for life, [Score=62.4, Expect=1e-11]} {Celegans: WBGene00008592, F08H9.4, [RH, Score=61.2, Expect=1e-11]} {Smed: dd_Smed_v6_5406_0_1, dd_Smed_v6_5406_0_1, [RH, Score=99.8, Expect=8e-25]} {RNA1509_19157} {RNA1310_50408} {RNA815_48338}

Cumulative graph for MligTC455_18446

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.767 1.421 1.00000 1.00000
RegionR2 -3.365 1.421 0.99827 1.00000
RegionR3 -1.26 1.421 1.00000 1.00000
RegionR4 8.962 1.421 0.00220 0.01925
RegionR5 4.249 1.421 0.02038 0.09846
RegionR6 -0.997 1.421 1.00000 1.00000
RegionR7 1.535 1.421 0.27969 0.91231
RegionR8 -2.357 1.421 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 4.459 1.421 1.00000 1.00000
RegenerationR2 -0.645 1.421 0.59430 0.91309
RegenerationR3 1.197 1.421 0.38010 0.79061
RegenerationR4 -2.337 1.421 0.30723 0.74836
RegenerationR5 -1.55 1.421 0.38460 0.78876
RegenerationR6 2.827 1.421 0.46616 0.78204
RegenerationBL 0.095 1.421 0.96373 1.00000
RegenerationTP 0.723 1.421 0.98384 1.00000


Genes with expression patterns similar to MligTC455_18446

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_18446 73 1.53 Mlig455_036818, Mlig455_053021

Neo: -

Age: -

Region-enriched R4: 8.962/0.01925

HSPB8 3 - - 1.000 1.000 - 1.000

Mlig455_036818 {REF} {Length: 2307} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=91.3]; HSP20-like domain found in ArsA [PF17886.3, score=29.5]} {Human: ENSG00000152137, HSPB8, heat shock protein family B (small) member 8, [Score=48.5, Expect=2e-06]} {Mouse: ENSMUSG00000041548, Hspb8, heat shock protein 8, [Score=48.9, Expect=1e-06]} {Dmel: FBgn0011296, l(2)efl, lethal (2) essential for life, [Score=62.4, Expect=1e-11]} {Celegans: WBGene00008592, F08H9.4, [RH, Score=61.2, Expect=1e-11]} {Smed: dd_Smed_v6_5406_0_1, dd_Smed_v6_5406_0_1, [RH, Score=99.8, Expect=8e-25]} {RNA1509_19157} {RNA1310_50408} {RNA815_48338}

Mlig455_053021 {REF} {Length: 2310} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=91.3]; HSP20-like domain found in ArsA [PF17886.3, score=29.5]} {Human: ENSG00000152137, HSPB8, heat shock protein family B (small) member 8, [Score=48.5, Expect=2e-06]} {Mouse: ENSMUSG00000041548, Hspb8, heat shock protein 8, [Score=48.9, Expect=1e-06]} {Dmel: FBgn0011296, l(2)efl, lethal (2) essential for life, [Score=62.4, Expect=1e-11]} {Celegans: WBGene00008592, F08H9.4, [RH, Score=61.2, Expect=1e-11]} {Smed: dd_Smed_v6_5406_0_1, dd_Smed_v6_5406_0_1, [RH, Score=99.8, Expect=8e-25]} {RNA1509_19157} {RNA1310_50408} {RNA815_48338}
2. MligTC455_06096 52 1.08 Mlig455_005379, Mlig455_005440

Neo: -

Age: -

0.962 - - - 0.962 - -

Mlig455_005379 {REF} {Length: 268} {NoTransDecoderORF} {RNA1509_56116} {RNA1310_25732}

Mlig455_005440 {REF} {Length: 656} {NoTransDecoderORF} {RNA1509_56116} {RNA1310_25732} {RNA815_53258}
3. MligTC455_51548 75 1.57 Mlig455_053904

Neo: -

Age: Up-Down-Up

Region-enriched R4: 4.552/0.02304

PLEKHM2 0.96 - - 0.960 - - - Mlig455_053904 {REF} {Length: 4281} {TRANSSPLICED} {Pfam: RUN domain [PF02759.21, score=47.7]} {Human: ENSG00000116786, PLEKHM2, pleckstrin homology and RUN domain containing M2, [RH, Score=101, Expect=2e-21]} {Mouse: ENSMUSG00000028917, Plekhm2, pleckstrin homology domain containing, family M (with RUN domain) member 2, [RH, Score=101, Expect=1e-21]} {Dmel: FBgn0051064, CG31064, [Score=52.0, Expect=2e-06]} {RNA1509_13879} {RNA1310_7400.1} {RNA815_2508}
4. MligTC455_33355 166 3.47 Mlig455_025748, Mlig455_064410

Neo: -

Age: Down-Up-Down

SP4 0.956 - - - 0.956 - -

Mlig455_025748 {REF} {Length: 2231} {Pfam: Zinc-finger double domain [PF13465.8, score=45.8]; Zinc finger, C2H2 type [PF00096.28, score=44.8]; C2H2-type zinc finger [PF13894.8, score=29.7]} {Human: ENSG00000105866, SP4, Sp4 transcription factor, [RH, Score=186, Expect=2e-52]; ENSG00000185591, SP1, Sp1 transcription factor, [RH, Score=179, Expect=5e-50]} {Mouse: ENSMUSG00000025323, Sp4, trans-acting transcription factor 4, [RH, Score=190, Expect=6e-54]} {Dmel: FBgn0039169, Spps, Sp1-like factor for pairing sensitive-silencing, [RH, Score=174, Expect=4e-48]} {Celegans: WBGene00012735, sptf-3, SP (Specificity Protein) Transcription Factor, [RH, Score=155, Expect=1e-43]} {Smed: dd_Smed_v6_7824_0_1, dd_Smed_v6_7824_0_1, [RH, Score=171, Expect=1e-49]} {RNA1509_53494} {RNA1310_27619} {RNA815_23917}

Mlig455_064410 {REF} {Length: 2233} {Pfam: Zinc-finger double domain [PF13465.8, score=45.8]; Zinc finger, C2H2 type [PF00096.28, score=44.8]; C2H2-type zinc finger [PF13894.8, score=29.7]} {Human: ENSG00000105866, SP4, Sp4 transcription factor, [RH, Score=186, Expect=2e-52]; ENSG00000185591, SP1, Sp1 transcription factor, [RH, Score=179, Expect=5e-50]} {Mouse: ENSMUSG00000025323, Sp4, trans-acting transcription factor 4, [RH, Score=190, Expect=7e-54]} {Dmel: FBgn0039169, Spps, Sp1-like factor for pairing sensitive-silencing, [RH, Score=174, Expect=5e-48]} {Celegans: WBGene00012735, sptf-3, SP (Specificity Protein) Transcription Factor, [RH, Score=155, Expect=1e-43]} {Smed: dd_Smed_v6_7824_0_1, dd_Smed_v6_7824_0_1, [RH, Score=171, Expect=1e-49]} {RNA1509_53494} {RNA1310_27619, RNA1509_53494} {RNA1509_53494, RNA815_23917}
5. MligTC455_22343 291 6.05 Mlig455_067688

Neo: -

Age: Up-Down-Down

0.954 - - - - - 0.954 Mlig455_067688 {REF} {Length: 1169} {NoTransDecoderORF} {RNA1509_30717, RNA1509_53081} {RNA1310_37685.3, RNA1509_53081} {RNA1509_53081, RNA815_13681}
6. MligTC455_28935 350 7.3 Mlig455_001893

Neo: Int S/G2/M

Age: logFC(26M/2M)=-0.374

0.952 - - - 0.952 - - Mlig455_001893 {REF} {Length: 1894} {Pfam: Universal stress protein family [PF00582.28, score=78.8]} {Smed: dd_Smed_v6_1092_0_1, dd_Smed_v6_1092_0_1, [Score=112, Expect=2e-32]} {RNA1509_16808, RNA1509_2764, RNA1509_31626} {RNA1310_13748, RNA1509_16808, RNA1509_31626} {RNA1509_16808, RNA1509_31626, RNA815_17818.1}
7. MligTC455_29578 48 1 Mlig455_039167, Mlig455_051647

Neo: -

Age: -

0.951 - - - 0.951 - -

Mlig455_039167 {REF} {Length: 3432} {RNA1509_18097} {RNA1310_77226} {RNA815_28605}

Mlig455_051647 {REF} {Length: 3131} {RNA1310_77226} {RNA815_28605}
8. MligTC455_36086 1067 22.22 Mlig455_029146

Neo: -

Age: logFC(26M/2M)=-0.343

Regeneration-upregulated BL: 2.147

Regeneration-enriched BL: 2.147

CA12 0.95 - - - 0.950 - - Mlig455_029146 {REF} {Length: 5294} {TRANSSPLICED} {Pfam: Eukaryotic-type carbonic anhydrase [PF00194.23, score=226.5]} {Human: ENSG00000074410, CA12, carbonic anhydrase 12, [Score=155, Expect=4e-44]; ENSG00000168748, CA7, carbonic anhydrase 7, [Score=154, Expect=2e-44]} {Mouse: ENSMUSG00000038526, Car14, carbonic anhydrase 14, [Score=161, Expect=1e-46]; ENSMUSG00000032373, Car12, carbonic anhydrase 12, [Score=159, Expect=2e-45]; ENSMUSG00000027562, Car2, carbonic anhydrase 2, [Score=154, Expect=9e-45]} {Dmel: FBgn0027844, CAH1, Carbonic anhydrase 1, [Score=142, Expect=4e-40]} {Celegans: WBGene00000281, cah-3, Putative carbonic anhydrase 3, [Score=124, Expect=1e-33]} {Smed: dd_Smed_v6_5784_0_1, dd_Smed_v6_5784_0_1, [Score=157, Expect=7e-46]} {RNA1509_20720, RNA1509_28119, RNA1509_34508, RNA1509_51922, RNA1509_60129} {RNA1310_14409, RNA1509_20720, RNA1509_34508, RNA1509_51922, RNA1509_60129} {RNA1509_20720, RNA1509_34508, RNA1509_51922, RNA1509_60129, RNA815_10315}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA