Data search


search
Exact
Search

Results for MligTC455_18640

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_18640 15329 319.35 Mlig455_007830

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.227

RPL37 Mlig455_007830 {REF} {Length: 456} {TRANSSPLICED} {Pfam: Ribosomal protein L37e [PF01907.21, score=93.6]} {Human: ENSG00000145592, RPL37, ribosomal protein L37, [RH, Score=120, Expect=1e-36]} {Mouse: ENSMUSG00000041841, Rpl37, ribosomal protein L37, [RH, Score=120, Expect=9e-37]} {Dmel: FBgn0030616, RpL37a, Ribosomal protein L37A, [RH, Score=133, Expect=4e-42]} {Celegans: WBGene00012179, W01D2.1, Ribosomal protein L37, [RH, Score=87.4, Expect=4e-24]} {Smed: dd_Smed_v6_97_0_1, dd_Smed_v6_97_0_1, [RH, Score=130, Expect=2e-41]} {RNA1509_14331} {RNA1310_79744} {RNA815_44402}

Cumulative graph for MligTC455_18640

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.08 8.407 0.83417 1.00000
RegionR2 -0.416 8.407 0.18000 0.53023
RegionR3 0.365 8.407 0.16864 0.69216
RegionR4 0.111 8.407 0.70229 0.99072
RegionR5 0.306 8.407 0.23407 0.54239
RegionR6 0.056 8.407 0.83382 1.00000
RegionR7 0.162 8.407 0.53362 1.00000
RegionR8 -0.505 8.407 0.08784 0.56046

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.665 8.407 0.00097 0.16886
RegenerationR2 -0.46 8.407 0.17920 0.62140
RegenerationR3 -0.569 8.407 0.09971 0.50329
RegenerationR4 -0.321 8.407 0.36297 0.78848
RegenerationR5 -0.684 8.407 0.04724 0.35228
RegenerationR6 -0.539 8.407 0.12207 0.42993
RegenerationBL -0.694 8.407 0.02549 0.17554
RegenerationTP -0.142 8.407 0.66216 0.99506


Genes with expression patterns similar to MligTC455_18640

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_18640 15329 319.35 Mlig455_007830

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.227

RPL37 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_007830 {REF} {Length: 456} {TRANSSPLICED} {Pfam: Ribosomal protein L37e [PF01907.21, score=93.6]} {Human: ENSG00000145592, RPL37, ribosomal protein L37, [RH, Score=120, Expect=1e-36]} {Mouse: ENSMUSG00000041841, Rpl37, ribosomal protein L37, [RH, Score=120, Expect=9e-37]} {Dmel: FBgn0030616, RpL37a, Ribosomal protein L37A, [RH, Score=133, Expect=4e-42]} {Celegans: WBGene00012179, W01D2.1, Ribosomal protein L37, [RH, Score=87.4, Expect=4e-24]} {Smed: dd_Smed_v6_97_0_1, dd_Smed_v6_97_0_1, [RH, Score=130, Expect=2e-41]} {RNA1509_14331} {RNA1310_79744} {RNA815_44402}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA