TomoSeq data search

Data search

Results for MligTC455_18702

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_18702	127	2.65	Mlig455_002250, Mlig455_002294	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.253 Regeneration-upregulated R2: 5.433 Regeneration-enriched R2: 5.433	RPS7	Mlig455_002250 {REF} {Length: 1837} {TRANSSPLICED} {Pfam: Ribosomal protein S7e [PF01251.20, score=190.0]; Major intrinsic protein [PF00230.22, score=18.7]} {Human: ENSG00000171863, RPS7, ribosomal protein S7, [Score=198, Expect=2e-60]} {Mouse: ENSMUSG00000061477, Rps7, ribosomal protein S7, [Score=198, Expect=1e-60]; ENSMUSG00000044424, Gm9493, predicted gene 9493, [Score=198, Expect=2e-60]} {Dmel: FBgn0039757, RpS7, Ribosomal protein S7, [Score=177, Expect=1e-52]} {Celegans: WBGene00004476, rps-7, 40S ribosomal protein S7, [Score=165, Expect=3e-48]} {Smed: dd_Smed_v6_204_0_1, dd_Smed_v6_204_0_1, [Score=156, Expect=5e-45]} {RNA1509_51916} {RNA1310_2260.1, RNA1509_51916} {RNA1509_51916, RNA815_12689} Mlig455_002294 {REF} {Length: 2983} {TRANSSPLICED} {Pfam: Ribosomal protein S7e [PF01251.20, score=190.0]; Major intrinsic protein [PF00230.22, score=18.8]} {Human: ENSG00000171863, RPS7, ribosomal protein S7, [Score=198, Expect=2e-60]} {Mouse: ENSMUSG00000061477, Rps7, ribosomal protein S7, [Score=198, Expect=1e-60]; ENSMUSG00000044424, Gm9493, predicted gene 9493, [Score=198, Expect=2e-60]} {Dmel: FBgn0039757, RpS7, Ribosomal protein S7, [Score=177, Expect=1e-52]} {Celegans: WBGene00004476, rps-7, 40S ribosomal protein S7, [Score=165, Expect=2e-48]} {Smed: dd_Smed_v6_204_0_1, dd_Smed_v6_204_0_1, [Score=156, Expect=5e-45]} {RNA1509_51916} {RNA1310_2260.1} {RNA815_12689}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_18702

127

2.65

Mlig455_002250, Mlig455_002294

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.253

Regeneration-upregulated R2: 5.433

Regeneration-enriched R2: 5.433

RPS7

Mlig455_002250 {REF} {Length: 1837} {TRANSSPLICED} {Pfam: Ribosomal protein S7e [PF01251.20, score=190.0]; Major intrinsic protein [PF00230.22, score=18.7]} {Human: ENSG00000171863, RPS7, ribosomal protein S7, [Score=198, Expect=2e-60]} {Mouse: ENSMUSG00000061477, Rps7, ribosomal protein S7, [Score=198, Expect=1e-60]; ENSMUSG00000044424, Gm9493, predicted gene 9493, [Score=198, Expect=2e-60]} {Dmel: FBgn0039757, RpS7, Ribosomal protein S7, [Score=177, Expect=1e-52]} {Celegans: WBGene00004476, rps-7, 40S ribosomal protein S7, [Score=165, Expect=3e-48]} {Smed: dd_Smed_v6_204_0_1, dd_Smed_v6_204_0_1, [Score=156, Expect=5e-45]} {RNA1509_51916} {RNA1310_2260.1, RNA1509_51916} {RNA1509_51916, RNA815_12689}

Mlig455_002294 {REF} {Length: 2983} {TRANSSPLICED} {Pfam: Ribosomal protein S7e [PF01251.20, score=190.0]; Major intrinsic protein [PF00230.22, score=18.8]} {Human: ENSG00000171863, RPS7, ribosomal protein S7, [Score=198, Expect=2e-60]} {Mouse: ENSMUSG00000061477, Rps7, ribosomal protein S7, [Score=198, Expect=1e-60]; ENSMUSG00000044424, Gm9493, predicted gene 9493, [Score=198, Expect=2e-60]} {Dmel: FBgn0039757, RpS7, Ribosomal protein S7, [Score=177, Expect=1e-52]} {Celegans: WBGene00004476, rps-7, 40S ribosomal protein S7, [Score=165, Expect=2e-48]} {Smed: dd_Smed_v6_204_0_1, dd_Smed_v6_204_0_1, [Score=156, Expect=5e-45]} {RNA1509_51916} {RNA1310_2260.1} {RNA815_12689}

Cumulative graph for MligTC455_18702

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.336	2.162	0.99975	1.00000
RegionR2	-2.696	2.162	0.99970	1.00000
RegionR3	1.449	2.162	0.18811	0.72389
RegionR4	4.217	2.162	0.01040	0.06291
RegionR5	1.093	2.162	0.32750	0.67157
RegionR6	-1.275	2.162	0.99973	1.00000
RegionR7	-1.525	2.162	0.99975	1.00000
RegionR8	-1.599	2.162	0.99970	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.082	2.162	1.00000	1.00000
RegenerationR2	5.433	2.162	0.00005	0.00764	Specific for R2: 5.433
RegenerationR3	3.223	2.162	0.00990	0.18185
RegenerationR4	2.692	2.162	0.03089	0.28400
RegenerationR5	4.021	2.162	0.00082	0.04759
RegenerationR6	5.623	2.162	0.00083	0.03110
RegenerationBL	5.917	2.162	0.00059	0.01589
RegenerationTP	5.853	2.162	0.00882	0.15846

Genes with expression patterns similar to MligTC455_18702

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_18702	127	2.65	Mlig455_002250, Mlig455_002294	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.253 Regeneration-upregulated R2: 5.433 Regeneration-enriched R2: 5.433	RPS7	3	-	-	-	1.000	1.000	1.000	Mlig455_002250 {REF} {Length: 1837} {TRANSSPLICED} {Pfam: Ribosomal protein S7e [PF01251.20, score=190.0]; Major intrinsic protein [PF00230.22, score=18.7]} {Human: ENSG00000171863, RPS7, ribosomal protein S7, [Score=198, Expect=2e-60]} {Mouse: ENSMUSG00000061477, Rps7, ribosomal protein S7, [Score=198, Expect=1e-60]; ENSMUSG00000044424, Gm9493, predicted gene 9493, [Score=198, Expect=2e-60]} {Dmel: FBgn0039757, RpS7, Ribosomal protein S7, [Score=177, Expect=1e-52]} {Celegans: WBGene00004476, rps-7, 40S ribosomal protein S7, [Score=165, Expect=3e-48]} {Smed: dd_Smed_v6_204_0_1, dd_Smed_v6_204_0_1, [Score=156, Expect=5e-45]} {RNA1509_51916} {RNA1310_2260.1, RNA1509_51916} {RNA1509_51916, RNA815_12689} Mlig455_002294 {REF} {Length: 2983} {TRANSSPLICED} {Pfam: Ribosomal protein S7e [PF01251.20, score=190.0]; Major intrinsic protein [PF00230.22, score=18.8]} {Human: ENSG00000171863, RPS7, ribosomal protein S7, [Score=198, Expect=2e-60]} {Mouse: ENSMUSG00000061477, Rps7, ribosomal protein S7, [Score=198, Expect=1e-60]; ENSMUSG00000044424, Gm9493, predicted gene 9493, [Score=198, Expect=2e-60]} {Dmel: FBgn0039757, RpS7, Ribosomal protein S7, [Score=177, Expect=1e-52]} {Celegans: WBGene00004476, rps-7, 40S ribosomal protein S7, [Score=165, Expect=2e-48]} {Smed: dd_Smed_v6_204_0_1, dd_Smed_v6_204_0_1, [Score=156, Expect=5e-45]} {RNA1509_51916} {RNA1310_2260.1} {RNA815_12689}
2.	MligTC455_43802	1005	20.94	Mlig455_027593, Mlig455_039459, Mlig455_046191	Neo: - Age: -	WASHC1	0.952	-	-	-	-	0.952	-	Mlig455_027593 {REF} {Length: 2493} {TRANSSPLICED} {Pfam: WAHD domain of WASH complex [PF11945.10, score=169.9]} {Human: ENSG00000181404, WASHC1, WASH complex subunit 1, [RH, Score=152, Expect=5e-40]} {Mouse: ENSMUSG00000024101, Washc1, WASH complex subunit 1, [RH, Score=140, Expect=1e-35]} {Dmel: FBgn0033692, wash, washout, [Score=84.0, Expect=7e-17]} {Smed: dd_Smed_v6_6355_0_1, dd_Smed_v6_6355_0_1, [RH, Score=122, Expect=4e-31]} {RNA1509_21860} {RNA1310_34415} {RNA815_16608} Mlig455_039459 {REF} {Length: 2392} {TRANSSPLICED} {Pfam: WAHD domain of WASH complex [PF11945.10, score=168.5]} {Human: ENSG00000181404, WASHC1, WASH complex subunit 1, [RH, Score=152, Expect=4e-40]} {Mouse: ENSMUSG00000024101, Washc1, WASH complex subunit 1, [RH, Score=140, Expect=9e-36]} {Dmel: FBgn0033692, wash, washout, [Score=84.0, Expect=7e-17]} {Smed: dd_Smed_v6_6355_0_1, dd_Smed_v6_6355_0_1, [RH, Score=123, Expect=3e-31]} {RNA1509_21860, RNA1509_56061} {RNA1310_34415, RNA1509_56061} {RNA1509_56061, RNA815_16608} Mlig455_046191 {REF} {Length: 2493} {TRANSSPLICED} {Pfam: WAHD domain of WASH complex [PF11945.10, score=169.9]} {Human: ENSG00000181404, WASHC1, WASH complex subunit 1, [RH, Score=152, Expect=5e-40]} {Mouse: ENSMUSG00000024101, Washc1, WASH complex subunit 1, [RH, Score=140, Expect=1e-35]} {Dmel: FBgn0033692, wash, washout, [Score=84.0, Expect=7e-17]} {Smed: dd_Smed_v6_6355_0_1, dd_Smed_v6_6355_0_1, [RH, Score=122, Expect=4e-31]} {RNA1509_21860} {RNA1310_34415, RNA1509_21860} {RNA1509_21860, RNA815_16608}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_18702

127

2.65

Mlig455_002250, Mlig455_002294

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.253

Regeneration-upregulated R2: 5.433

Regeneration-enriched R2: 5.433

RPS7

1.000

MligTC455_43802

1005

20.94

Mlig455_027593, Mlig455_039459, Mlig455_046191

Neo: -

Age: -

WASHC1

0.952

Mlig455_027593 {REF} {Length: 2493} {TRANSSPLICED} {Pfam: WAHD domain of WASH complex [PF11945.10, score=169.9]} {Human: ENSG00000181404, WASHC1, WASH complex subunit 1, [RH, Score=152, Expect=5e-40]} {Mouse: ENSMUSG00000024101, Washc1, WASH complex subunit 1, [RH, Score=140, Expect=1e-35]} {Dmel: FBgn0033692, wash, washout, [Score=84.0, Expect=7e-17]} {Smed: dd_Smed_v6_6355_0_1, dd_Smed_v6_6355_0_1, [RH, Score=122, Expect=4e-31]} {RNA1509_21860} {RNA1310_34415} {RNA815_16608}

Mlig455_039459 {REF} {Length: 2392} {TRANSSPLICED} {Pfam: WAHD domain of WASH complex [PF11945.10, score=168.5]} {Human: ENSG00000181404, WASHC1, WASH complex subunit 1, [RH, Score=152, Expect=4e-40]} {Mouse: ENSMUSG00000024101, Washc1, WASH complex subunit 1, [RH, Score=140, Expect=9e-36]} {Dmel: FBgn0033692, wash, washout, [Score=84.0, Expect=7e-17]} {Smed: dd_Smed_v6_6355_0_1, dd_Smed_v6_6355_0_1, [RH, Score=123, Expect=3e-31]} {RNA1509_21860, RNA1509_56061} {RNA1310_34415, RNA1509_56061} {RNA1509_56061, RNA815_16608}

Mlig455_046191 {REF} {Length: 2493} {TRANSSPLICED} {Pfam: WAHD domain of WASH complex [PF11945.10, score=169.9]} {Human: ENSG00000181404, WASHC1, WASH complex subunit 1, [RH, Score=152, Expect=5e-40]} {Mouse: ENSMUSG00000024101, Washc1, WASH complex subunit 1, [RH, Score=140, Expect=1e-35]} {Dmel: FBgn0033692, wash, washout, [Score=84.0, Expect=7e-17]} {Smed: dd_Smed_v6_6355_0_1, dd_Smed_v6_6355_0_1, [RH, Score=122, Expect=4e-31]} {RNA1509_21860} {RNA1310_34415, RNA1509_21860} {RNA1509_21860, RNA815_16608}