Data search
Results for MligTC455_18704
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_18704 | 930 | 19.38 | Mlig455_017258 | Neo: Irradiation Age: Up-Down-Up Region-specific R4: 2.064 Region-enriched R4: 1.993/0.00003 Regeneration-downregulated R4: -1.614 Regeneration-depleted R4: -1.614 |
Mlig455_017258 {REF} {Length: 1607} {TRANSSPLICED} {Mouse: ENSMUSG00000036368, Rmdn2, regulator of microtubule dynamics 2, [Score=68.2, Expect=4e-12]} {Celegans: WBGene00011501, rmd-1, Regulator of microtubule dynamics protein 1, [Score=65.5, Expect=2e-12]} {RNA1509_22774} {RNA1310_25652, RNA1509_22774} {RNA1509_22774, RNA815_9699} |
Cumulative graph for MligTC455_18704
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.497 | 4.662 | 0.25680 | 0.90487 | |
| RegionR2 | 0.278 | 4.662 | 0.55303 | 0.91801 | |
| RegionR3 | -0.648 | 4.662 | 0.13065 | 0.62052 | |
| RegionR4 | 1.993 | 4.662 | 0.00000 | 0.00003 | Specific for R4: 2.064 |
| RegionR5 | -0.359 | 4.662 | 0.35204 | 0.70162 | |
| RegionR6 | -0.658 | 4.662 | 0.12851 | 0.64882 | |
| RegionR7 | 0.149 | 4.662 | 0.76035 | 1.00000 | |
| RegionR8 | 0.743 | 4.662 | 0.18391 | 0.77061 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.684 | 4.662 | 0.70338 | 1.00000 | |
| RegenerationR2 | 0.309 | 4.662 | 0.39154 | 0.80883 | |
| RegenerationR3 | 0.525 | 4.662 | 0.22622 | 0.66150 | |
| RegenerationR4 | -1.614 | 4.662 | 0.00007 | 0.00535 | Specific for R4: -1.614 |
| RegenerationR5 | 0.397 | 4.662 | 0.30793 | 0.73459 | |
| RegenerationR6 | 0.707 | 4.662 | 0.10916 | 0.40856 | |
| RegenerationBL | -0.209 | 4.662 | 0.66952 | 1.00000 | |
| RegenerationTP | -0.013 | 4.662 | 0.97885 | 1.00000 |
Genes with expression patterns similar to MligTC455_18704
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_18704 | 930 | 19.38 | Mlig455_017258 | Neo: Irradiation Age: Up-Down-Up Region-specific R4: 2.064 Region-enriched R4: 1.993/0.00003 Regeneration-downregulated R4: -1.614 Regeneration-depleted R4: -1.614 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_017258 {REF} {Length: 1607} {TRANSSPLICED} {Mouse: ENSMUSG00000036368, Rmdn2, regulator of microtubule dynamics 2, [Score=68.2, Expect=4e-12]} {Celegans: WBGene00011501, rmd-1, Regulator of microtubule dynamics protein 1, [Score=65.5, Expect=2e-12]} {RNA1509_22774} {RNA1310_25652, RNA1509_22774} {RNA1509_22774, RNA815_9699} | |
| 2. | MligTC455_39289 | 285 | 5.94 | Mlig455_031539 | Neo: Int S/G2/M Age: - Region-enriched R4: 1.813/0.01578 |
PDIA3 | 0.956 | - | - | - | - | 0.956 | - | Mlig455_031539 {REF} {Length: 2465} {Pfam: Thioredoxin [PF00085.22, score=201.5]; Thioredoxin-like domain [PF13848.8, score=85.9]; Thioredoxin-like domain [PF13098.8, score=33.0]; Thioredoxin-like [PF13899.8, score=28.6]; Thioredoxin-like [PF13905.8, score=28.0]; AhpC/TSA family [PF00578.23, score=22.9]; Calsequestrin [PF01216.19, score=21.8]; Redoxin [PF08534.12, score=21.0]} {Human: ENSG00000167004, PDIA3, protein disulfide isomerase family A member 3, [RH, Score=480, Expect=2e-165]} {Mouse: ENSMUSG00000027248, Pdia3, protein disulfide isomerase associated 3, [RH, Score=473, Expect=8e-163]} {Dmel: FBgn0033663, ERp60, [Score=452, Expect=7e-155]} {Celegans: WBGene00003964, pdi-3, [Score=439, Expect=7e-150]} {Smed: dd_Smed_v6_426_0_1, dd_Smed_v6_426_0_1, [Score=543, Expect=0.0]} {RNA1509_21060} {RNA1310_17651, RNA1509_21060} {RNA1509_21060, RNA815_16482.1} |
| 3. | MligTC455_29446 | 56 | 1.17 | Mlig455_061415 | Neo: - |
0.954 | - | - | - | - | 0.954 | - | Mlig455_061415 {REF} {Length: 3889} {Pfam: OB-fold nucleic acid binding domain [PF01336.27, score=48.5]; Replication protein A OB domain [PF16900.7, score=46.7]; RecG wedge domain [PF17191.6, score=18.9]} {Smed: dd_Smed_v6_3342_0_1, dd_Smed_v6_3342_0_1, [Score=89.4, Expect=2e-19]} {RNA1509_10085} {RNA1310_6627.1, RNA1509_10085} {RNA1509_10085, RNA815_3343} | |
| 4. | MligTC455_38770 | 397 | 8.28 | Mlig455_018183 | Neo: - Age: Down-Down-Up |
NIT1 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_018183 {REF} {Length: 2149} {TRANSSPLICED} {Pfam: Carbon-nitrogen hydrolase [PF00795.24, score=191.2]; HIT domain [PF01230.25, score=67.3]; Ribosomal L29 protein [PF00831.25, score=63.8]} {Human: ENSG00000158793, NIT1, nitrilase 1, [RH, Score=256, Expect=8e-80]} {Mouse: ENSMUSG00000013997, Nit1, nitrilase 1, [RH, Score=264, Expect=8e-83]} {Dmel: FBgn0024945, NitFhit, Nitrilase and fragile histidine triad fusion protein, [RH, Score=312, Expect=6e-100]} {Celegans: WBGene00003594, nft-1, Nitrilase and fragile histidine triad fusion protein NitFhit Bis(5'-adenosyl)-triphosphatase Nitrilase homolog, [RH, Score=361, Expect=5e-119]} {Smed: dd_Smed_v6_2711_0_1, dd_Smed_v6_2711_0_1, [RH, Score=401, Expect=8e-135]} {RNA1509_19262} {RNA1310_18639.1} {RNA815_7752.1} |
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