Data search


search
Exact
Search

Results for MligTC455_18815

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_18815 367 7.64 Mlig455_005417

Neo: -

Age: Down-Down-Up

Mlig455_005417 {REF} {Length: 419} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_11238} {RNA1310_16270}

Cumulative graph for MligTC455_18815

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.683 3.407 0.16712 0.79126
RegionR2 1.48 3.407 0.06213 0.30059
RegionR3 0.515 3.407 0.46108 0.97054
RegionR4 -0.832 3.407 0.29076 0.60148
RegionR5 0.174 3.407 0.77498 1.00000
RegionR6 0.744 3.407 0.25983 0.84759
RegionR7 0.815 3.407 0.29402 0.92860
RegionR8 -0.213 3.407 0.85736 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -3.32 3.407 0.61187 1.00000
RegenerationR2 0.566 3.407 0.41905 0.82660
RegenerationR3 0.752 3.407 0.34451 0.76806
RegenerationR4 0.542 3.407 0.48383 0.86050
RegenerationR5 -0.786 3.407 0.29724 0.72492
RegenerationR6 0.328 3.407 0.66823 0.90793
RegenerationBL 1.156 3.407 0.18298 0.51236
RegenerationTP 1.686 3.407 0.05427 0.38035


Genes with expression patterns similar to MligTC455_18815

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_18815 367 7.64 Mlig455_005417

Neo: -

Age: Down-Down-Up

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_005417 {REF} {Length: 419} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_11238} {RNA1310_16270}
2. MligTC455_17964 63 1.31 Mlig455_025546

Neo: -

Age: -

1.787 - - - - 0.958 0.829 Mlig455_025546 {REF} {Length: 865} {NoTransDecoderORF} {RNA1509_13658} {RNA1310_113576}
3. MligTC455_32569 388 8.09 Mlig455_037270

Neo: -

Age: -

IRAK4 1.769 - - - 0.803 - 0.966 Mlig455_037270 {REF} {Length: 3195} {Pfam: Protein kinase domain [PF00069.27, score=132.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=110.1]; ABC1 atypical kinase-like domain [PF03109.18, score=19.4]} {Human: ENSG00000198001, IRAK4, interleukin 1 receptor associated kinase 4, [Score=78.6, Expect=1e-14]} {Mouse: ENSMUSG00000059883, Irak4, interleukin-1 receptor-associated kinase 4, [Score=82.4, Expect=5e-16]} {Dmel: FBgn0010441, pll, pelle, [Score=75.5, Expect=8e-14]} {Celegans: WBGene00012779, cdkl-1, Cyclin-Dependent Kinase-Like, [Score=60.5, Expect=2e-09]} {Smed: dd_Smed_v6_9065_0_1, dd_Smed_v6_9065_0_1, [Score=67.8, Expect=4e-12]} {RNA1509_57751, RNA1509_59099} {RNA1310_29366, RNA1509_57751, RNA1509_59099} {RNA1509_57751, RNA1509_59099, RNA815_24983}
4. MligTC455_15410 34 0.71 Mlig455_061041

Neo: -

Age: -

1.677 - - - - 0.969 0.708 Mlig455_061041 {REF} {Length: 4341} {RNA1509_2515} {RNA1310_28603.1} {RNA815_3258.1}
5. MligTC455_38728 1468 30.58 Mlig455_044491

Neo: -

Age: -

CXXC1 0.961 - - - - - 0.961 Mlig455_044491 {REF} {Length: 3517} {tRNA: Val(CAC),pseudo, score=23.9} {Pfam: CXXC zinc finger domain [PF02008.22, score=45.3]; PHD-finger [PF00628.31, score=39.6]} {Human: ENSG00000154832, CXXC1, CXXC finger protein 1, [RH, Score=84.0, Expect=2e-17]} {Mouse: ENSMUSG00000024560, Cxxc1, CXXC finger 1 (PHD domain), [Score=85.1, Expect=6e-17]} {Dmel: FBgn0030121, Cfp1, CXXC finger protein 1, [Score=94.0, Expect=6e-20]} {Celegans: WBGene00009180, nurf-1, Nucleosome-remodeling factor subunit NURF301-like, [Score=51.2, Expect=1e-06]} {Smed: dd_Smed_v6_15324_0_2, dd_Smed_v6_15324_0_2, [RH, Score=103, Expect=1e-24]} {RNA1509_17174, RNA1509_38758, RNA1509_4438} {RNA1310_7491.1, RNA1509_17174, RNA1509_38758, RNA1509_4438} {RNA1509_17174, RNA1509_38758, RNA1509_4438, RNA815_18184}
6. MligTC455_13875 92 1.92 Mlig455_025418

Neo: -

Age: -

0.96 - - - - 0.960 - Mlig455_025418 {REF} {Length: 631} {NoTransDecoderORF}
7. MligTC455_27485 366 7.62 Mlig455_047776

Neo: -

Age: Up-Down-Down

0.959 - - - - - 0.959 Mlig455_047776 {REF} {Length: 885} {RNA1509_42296} {RNA1310_66477} {RNA815_31452.1}
8. MligTC455_38676 673 14.03 Mlig455_011364, Mlig455_016341, Mlig455_027534, Mlig455_036771, Mlig455_053663

Neo: -

Age: -

ZNF570 0.957 - - - - 0.957 -

Mlig455_011364 {REF} {Length: 832} {Celegans: WBGene00019192, H12I13.3, [Score=53.9, Expect=6e-09]} {Smed: dd_Smed_v6_9974_1_2, dd_Smed_v6_9974_1_2, [Score=54.7, Expect=3e-09]} {RNA1509_8360} {RNA1310_8325.1} {RNA815_1671.1}

Mlig455_016341 {REF} {Length: 11905} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=229.4]; Zinc finger, C2H2 type [PF00096.28, score=139.8]; C2H2-type zinc finger [PF13894.8, score=104.8]; C2H2-type zinc finger [PF13912.8, score=65.0]; Zinc-finger of C2H2 type [PF12874.9, score=48.2]; zinc-finger C2H2-type [PF16622.7, score=37.1]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=36.8]; KIAA1045 RING finger [PF16744.7, score=34.8]; Family of unknown function (DUF5810) [PF19126.2, score=30.1]; zinc-ribbon family [PF17032.7, score=27.9]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=27.7]; AN1-like Zinc finger [PF01428.18, score=24.8]; Ubiquitin-Binding Zinc Finger [PF18439.3, score=23.7]; C2H2-type zinc ribbon [PF15909.7, score=23.2]; BolA-like protein [PF01722.20, score=21.0]; Zinc ribbon domain [PF09723.12, score=20.8]; GAGA factor [PF09237.13, score=20.5]; Hydrogenase/urease nickel incorporation, metallochaperone, hypA [PF01155.21, score=20.2]} {Human: ENSG00000171827, ZNF570, zinc finger protein 570, [Score=274, Expect=4e-88]; ENSG00000188283, ZNF383, zinc finger protein 383, [Score=272, Expect=1e-88]; ENSG00000198440, ZNF583, zinc finger protein 583, [Score=270, Expect=1e-86]; ENSG00000196867, ZFP28, ZFP28 zinc finger protein, [Score=269, Expect=8e-84]; ENSG00000176293, ZNF135, zinc finger protein 135, [Score=268, Expect=2e-85]; ENSG00000167637, ZNF283, zinc finger protein 283, [Score=265, Expect=1e-83]; ENSG00000197050, ZNF420, zinc finger protein 420, [Score=265, Expect=9e-84]; ENSG00000170631, ZNF16, zinc finger protein 16, [Score=265, Expect=1e-83]; ENSG00000198939, ZFP2, ZFP2 zinc finger protein, [Score=264, Expect=2e-85]; ENSG00000124459, ZNF45, zinc finger protein 45, [Score=263, Expect=8e-83]; ENSG00000176371, ZSCAN2, zinc finger and SCAN domain containing 2, [Score=263, Expect=2e-83]; ENSG00000196597, ZNF782, zinc finger protein 782, [Score=262, Expect=2e-82]; ENSG00000234284, ZNF879, zinc finger protein 879, [Score=261, Expect=3e-83]; ENSG00000196152, ZNF79, zinc finger protein 79, [Score=261, Expect=2e-84]; ENSG00000062370, ZNF112, zinc finger protein 112, [Score=261, Expect=2e-80]; ENSG00000159917, ZNF235, zinc finger protein 235, [Score=261, Expect=7e-82]; ENSG00000196605, ZNF846, zinc finger protein 846, [Score=261, Expect=6e-84]; ENSG00000167384, ZNF180, zinc finger protein 180, [Score=261, Expect=4e-82]} {Mouse: ENSMUSG00000045519, Zfp560, zinc finger protein 560, [Score=274, Expect=1e-86]; ENSMUSG00000078906, Gm14444, predicted gene 14444, [Score=273, Expect=6e-90]; ENSMUSG00000078865, Gm14406, predicted gene 14406, [Score=273, Expect=8e-90]; ENSMUSG00000099689, Zfp383, zinc finger protein 383, [Score=273, Expect=3e-89]; ENSMUSG00000078875, Gm14419, predicted gene 14419, [Score=271, Expect=2e-87]; ENSMUSG00000095648, Gm2004, predicted gene 2004, [Score=271, Expect=2e-87]; ENSMUSG00000078877, Gm14295, predicted gene 14295, [Score=270, Expect=2e-84]; ENSMUSG00000078902, Gm14443, predicted gene 14443, [Score=269, Expect=4e-86]; ENSMUSG00000078903, Gm14391, predicted gene 14391, [Score=268, Expect=1e-86]; ENSMUSG00000078887, Gm6710, predicted gene 6710, [Score=268, Expect=2e-86]; ENSMUSG00000062861, Zfp28, zinc finger protein 28, [Score=267, Expect=2e-83]; ENSMUSG00000078899, Gm4631, predicted gene 4631, [Score=267, Expect=1e-86]; ENSMUSG00000078897, Gm4724, predicted gene 4724, [Score=267, Expect=1e-86]; ENSMUSG00000078881, Gm14434, predicted gene 14434, [Score=267, Expect=1e-86]; ENSMUSG00000078880, Gm14308, predicted gene 14308, [Score=267, Expect=1e-86]; ENSMUSG00000078886, Gm2026, predicted gene 2026, [Score=267, Expect=1e-86]; ENSMUSG00000094475, Gm11007, predicted gene 11007, [Score=267, Expect=1e-86]; ENSMUSG00000094932, Gm2007, predicted gene 2007, [Score=267, Expect=1e-86]; ENSMUSG00000078878, Gm14305, predicted gene 14305, [Score=267, Expect=2e-86]; ENSMUSG00000044296, Zfp879, zinc finger protein 879, [Score=266, Expect=1e-85]; ENSMUSG00000063108, Zfp26, zinc finger protein 26, [Score=266, Expect=2e-82]; ENSMUSG00000030443, Zfp583, zinc finger protein 583, [Score=266, Expect=2e-85]; ENSMUSG00000059897, Zfp930, zinc finger protein 930, [Score=265, Expect=1e-86]; ENSMUSG00000074519, Zfp971, zinc finger protein 971, [Score=265, Expect=3e-86]; ENSMUSG00000078868, Gm14412, predicted gene 14412, [Score=264, Expect=3e-85]; ENSMUSG00000078862, Gm14326, predicted gene 14326, [Score=263, Expect=1e-84]; ENSMUSG00000058402, Zfp420, zinc finger protein 420, [Score=263, Expect=4e-84]; ENSMUSG00000071302, 2610044O15Rik8, RIKEN cDNA 2610044O15 gene, [Score=261, Expect=2e-85]; ENSMUSG00000095362, Gm14325, predicted gene 14325, [Score=261, Expect=2e-84]; ENSMUSG00000049321, Zfp2, zinc finger protein 2, [Score=261, Expect=1e-84]} {Dmel: FBgn0025874, Meics, Meiotic central spindle, [Score=206, Expect=1e-62]} {Celegans: WBGene00021931, Y55F3AM.14, [Score=174, Expect=3e-50]} {Smed: dd_Smed_v6_14824_0_1, dd_Smed_v6_14824_0_1, [Score=156, Expect=1e-45]} {RNA1509_21400, RNA1509_28643, RNA1509_46269, RNA1509_47487, RNA1509_52795} {RNA1310_576.1, RNA1509_21400, RNA1509_46269, RNA1509_47487, RNA1509_52795} {RNA1509_21400, RNA1509_46269, RNA1509_47487, RNA1509_52795, RNA815_1671.1}

Mlig455_027534 {REF} {Length: 373} {Pfam: Domain of unknown function (DUF4774) [PF15999.7, score=20.9]} {RNA1509_34718} {RNA1310_17621} {RNA815_50584}

Mlig455_036771 {REF} {Length: 4521} {RNA1509_6891} {RNA1310_77702} {RNA815_5572.1}

Mlig455_053663 {REF} {Length: 974} {Pfam: Integrase core domain [PF00665.28, score=30.0]} {Smed: dd_Smed_v6_11155_0_2, dd_Smed_v6_11155_0_2, [Score=58.2, Expect=1e-11]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}
9. MligTC455_52468 516 10.76 Mlig455_064232

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.559

C11orf1 0.954 - - - - 0.954 - Mlig455_064232 {REF} {Length: 1198} {Pfam: Protein of unknown function (DUF1143) [PF06608.13, score=55.2]} {Human: ENSG00000137720, C11orf1, chromosome 11 open reading frame 1, [RH, Score=52.0, Expect=4e-09]} {Mouse: ENSMUSG00000037971, 1110032A03Rik, RIKEN cDNA 1110032A03 gene, [RH, Score=53.1, Expect=3e-09]} {RNA1509_29539} {RNA1310_48982, RNA1509_29539} {RNA1509_29539, RNA815_26980.2}
10. MligTC455_35886 941 19.59 Mlig455_013877

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.313

Region-specific R4: 1.689

Region-enriched R4: 1.129/0.00623

Regeneration-downregulated R4: -1.365

Regeneration-depleted R4: -1.365

HRASLS2 0.951 - - - - 0.951 - Mlig455_013877 {REF} {Length: 1953} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=65.8]} {Human: ENSG00000133328, HRASLS2, HRAS like suppressor 2, [Score=52.4, Expect=7e-08]} {Mouse: ENSMUSG00000028003, Lrat, lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase), [RH, Score=50.4, Expect=5e-07]} {RNA1509_5071, RNA1509_56927} {RNA1310_21690, RNA1509_56927} {RNA1509_56927, RNA815_8872}
11. MligTC455_47039 480 9.99 Mlig455_000864

Neo: -

Age: Up-Up-Down

0.951 - - - - - 0.951 Mlig455_000864 {REF} {Length: 4614} {RNA1509_14066} {RNA1310_17543} {RNA815_19409}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA