Data search
Results for MligTC455_18836
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_18836 | 3646 | 75.96 | Mlig455_032790 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.148 |
COPB2 | Mlig455_032790 {REF} {Length: 3548} {TRANSSPLICED} {Pfam: Coatomer WD associated region [PF04053.16, score=535.5]; WD domain, G-beta repeat [PF00400.34, score=142.2]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=21.6]} {Human: ENSG00000184432, COPB2, coatomer protein complex subunit beta 2, [RH, Score=1354, Expect=0.0]} {Mouse: ENSMUSG00000032458, Copb2, coatomer protein complex, subunit beta 2 (beta prime), [RH, Score=1357, Expect=0.0]} {Dmel: FBgn0025724, beta'COP, Coat Protein (coatomer) beta', [RH, Score=1272, Expect=0.0]} {Celegans: WBGene00009542, copb-2, Probable coatomer subunit beta', [RH, Score=1177, Expect=0.0]} {Smed: dd_Smed_v6_789_0_1, dd_Smed_v6_789_0_1, [RH, Score=1200, Expect=0.0]} {RNA1509_2798, RNA1509_7754} {RNA1310_4077, RNA1509_2798, RNA1509_7754} {RNA1509_2798, RNA1509_7754, RNA815_1010.1} |
Cumulative graph for MligTC455_18836
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.253 | 6.38 | 0.65338 | 1.00000 | |
| RegionR2 | -0.299 | 6.38 | 0.33096 | 0.72306 | |
| RegionR3 | -0.282 | 6.38 | 0.26859 | 0.81335 | |
| RegionR4 | -0.232 | 6.38 | 0.43995 | 0.76879 | |
| RegionR5 | -0.025 | 6.38 | 0.91849 | 1.00000 | |
| RegionR6 | 0.318 | 6.38 | 0.20028 | 0.77139 | |
| RegionR7 | 0.439 | 6.38 | 0.11064 | 0.63106 | |
| RegionR8 | 0.334 | 6.38 | 0.31606 | 0.94884 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.141 | 6.38 | 0.18889 | 0.92857 | |
| RegenerationR2 | 0.19 | 6.38 | 0.52625 | 0.88219 | |
| RegenerationR3 | 0.213 | 6.38 | 0.50386 | 0.85860 | |
| RegenerationR4 | 0.218 | 6.38 | 0.49859 | 0.86886 | |
| RegenerationR5 | 0.448 | 6.38 | 0.14281 | 0.55731 | |
| RegenerationR6 | -0.118 | 6.38 | 0.70020 | 0.92429 | |
| RegenerationBL | 0.583 | 6.38 | 0.04140 | 0.23149 | |
| RegenerationTP | -0.565 | 6.38 | 0.09745 | 0.48846 |
Genes with expression patterns similar to MligTC455_18836
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_18836 | 3646 | 75.96 | Mlig455_032790 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.148 |
COPB2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_032790 {REF} {Length: 3548} {TRANSSPLICED} {Pfam: Coatomer WD associated region [PF04053.16, score=535.5]; WD domain, G-beta repeat [PF00400.34, score=142.2]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=21.6]} {Human: ENSG00000184432, COPB2, coatomer protein complex subunit beta 2, [RH, Score=1354, Expect=0.0]} {Mouse: ENSMUSG00000032458, Copb2, coatomer protein complex, subunit beta 2 (beta prime), [RH, Score=1357, Expect=0.0]} {Dmel: FBgn0025724, beta'COP, Coat Protein (coatomer) beta', [RH, Score=1272, Expect=0.0]} {Celegans: WBGene00009542, copb-2, Probable coatomer subunit beta', [RH, Score=1177, Expect=0.0]} {Smed: dd_Smed_v6_789_0_1, dd_Smed_v6_789_0_1, [RH, Score=1200, Expect=0.0]} {RNA1509_2798, RNA1509_7754} {RNA1310_4077, RNA1509_2798, RNA1509_7754} {RNA1509_2798, RNA1509_7754, RNA815_1010.1} |
Berezikov Lab - 2020-2021 © ERIBA