TomoSeq data search

Data search

Results for MligTC455_18905

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_18905	1013	21.11	Mlig455_061696, Mlig455_063090	Neo: Int S/G2/M Age: logFC(26M/2M)=1.728 Regeneration-enriched R6: 2.506 Regeneration-enriched R5: 2.209		Mlig455_061696 {REF} {Length: 1580} {Pfam: BTB/POZ domain [PF00651.33, score=38.8]} {RNA1509_17649} {RNA1310_15518} {RNA815_7807} Mlig455_063090 {REF} {Length: 1649} {Pfam: BTB/POZ domain [PF00651.33, score=38.9]; Monogalactosyldiacylglycerol (MGDG) synthase [PF06925.13, score=18.7]} {RNA1509_17649} {RNA1310_15518} {RNA815_7807}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_18905

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.398	4.697	0.08687	0.63793
RegionR2	1.526	4.697	0.04502	0.24969
RegionR3	1.683	4.697	0.00637	0.11195
RegionR4	0.999	4.697	0.22812	0.52058
RegionR5	-0.395	4.697	0.94057	1.00000
RegionR6	-0.248	4.697	0.91568	1.00000
RegionR7	1.952	4.697	0.00608	0.12534
RegionR8	0.88	4.697	0.41668	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	7.931	4.697	0.01584	0.53083
RegenerationR2	-0.147	4.697	0.73736	0.96879
RegenerationR3	0.89	4.697	0.05501	0.40345
RegenerationR4	1.583	4.697	0.00097	0.03443
RegenerationR5	2.209	4.697	0.00000	0.00154
RegenerationR6	2.506	4.697	0.00000	0.00044
RegenerationBL	1.05	4.697	0.05168	0.26202
RegenerationTP	0.265	4.697	0.65784	0.99279

Genes with expression patterns similar to MligTC455_18905

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_18905	1013	21.11	Mlig455_061696, Mlig455_063090	Neo: Int S/G2/M Age: logFC(26M/2M)=1.728 Regeneration-enriched R6: 2.506 Regeneration-enriched R5: 2.209		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_061696 {REF} {Length: 1580} {Pfam: BTB/POZ domain [PF00651.33, score=38.8]} {RNA1509_17649} {RNA1310_15518} {RNA815_7807} Mlig455_063090 {REF} {Length: 1649} {Pfam: BTB/POZ domain [PF00651.33, score=38.9]; Monogalactosyldiacylglycerol (MGDG) synthase [PF06925.13, score=18.7]} {RNA1509_17649} {RNA1310_15518} {RNA815_7807}
2.	MligTC455_16150	267	5.56	Mlig455_057692	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.781	KLHDC8A	1.708	0.959	-	0.749	-	-	-	Mlig455_057692 {REF} {Length: 1684} {Pfam: Kelch motif [PF13964.8, score=56.8]; Kelch motif [PF01344.27, score=52.7]; Kelch motif [PF07646.17, score=36.4]; Galactose oxidase, central domain [PF13418.8, score=35.1]; Kelch motif [PF13854.8, score=27.6]} {Human: ENSG00000162873, KLHDC8A, kelch domain containing 8A, [Score=58.5, Expect=3e-09]} {Mouse: ENSMUSG00000042115, Klhdc8a, kelch domain containing 8A, [Score=63.5, Expect=1e-10]} {Smed: dd_Smed_v6_14507_0_1, dd_Smed_v6_14507_0_1, [RH, Score=209, Expect=3e-63]} {RNA1509_58319, RNA1509_58644} {RNA1310_20213, RNA1509_58319, RNA1509_58644} {RNA1509_58319, RNA1509_58644, RNA815_8052}
3.	MligTC455_37792	210	4.38	Mlig455_024774	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.926 Region-enriched R2: 6.055/0.00271	PKD1L2	1.701	0.962	-	0.739	-	-	-	Mlig455_024774 {REF} {Length: 6374} {Pfam: Polycystin cation channel [PF08016.14, score=224.6]; PLAT/LH2 domain [PF01477.25, score=66.8]; Ion transport protein [PF00520.33, score=30.8]} {Human: ENSG00000166473, PKD1L2, polycystin 1 like 2 (gene/pseudogene), [Score=179, Expect=9e-45]} {Mouse: ENSMUSG00000034416, Pkd1l2, polycystic kidney disease 1 like 2, [Score=187, Expect=3e-47]} {Dmel: FBgn0041195, Pkd2, Polycystic kidney disease 2, [Score=109, Expect=1e-23]} {Celegans: WBGene00003058, lov-1, Location of vulva defective 1, [Score=187, Expect=2e-47]} {Smed: dd_Smed_v6_13975_0_1, dd_Smed_v6_13975_0_1, [Score=902, Expect=0.0]} {RNA1509_46134} {RNA1310_488} {RNA815_1711}
4.	MligTC455_22412	271	5.65	Mlig455_057681, Mlig455_059990	Neo: - Age: Down-Up-Up		0.985	0.985	-	-	-	-	-	Mlig455_057681 {REF} {Length: 2023} {RNA1509_30929} {RNA1310_27672} {RNA815_26534} Mlig455_059990 {REF} {Length: 2023} {RNA1509_30929} {RNA1310_27672} {RNA815_26534}
5.	MligTC455_19663	367	7.65	Mlig455_007764, Mlig455_056593	Neo: - Age: - Region-enriched R7: 3.065/0.00870		0.98	0.980	-	-	-	-	-	Mlig455_007764 {REF} {Length: 1520} {Pfam: Lectin C-type domain [PF00059.23, score=69.0]} {Mouse: ENSMUSG00000014542, Clec4f, C-type lectin domain family 4, member f, [Score=54.3, Expect=3e-08]} {Dmel: FBgn0035199, tfc, triforce, [RH, Score=64.7, Expect=6e-12]} {Celegans: WBGene00022858, ZK1193.2, [Score=57.4, Expect=2e-09]} {RNA1310_27721} {RNA815_13332} Mlig455_056593 {REF} {Length: 1499} {Pfam: Lectin C-type domain [PF00059.23, score=69.0]} {Mouse: ENSMUSG00000014542, Clec4f, C-type lectin domain family 4, member f, [Score=54.3, Expect=3e-08]} {Dmel: FBgn0035199, tfc, triforce, [RH, Score=64.7, Expect=6e-12]} {Celegans: WBGene00022858, ZK1193.2, [Score=57.4, Expect=2e-09]} {RNA1310_27721} {RNA815_13332}
6.	MligTC455_46970	116	2.42	Mlig455_023542, Mlig455_023648	Neo: - Age: Up-Down-Down		0.971	0.971	-	-	-	-	-	Mlig455_023542 {REF} {Length: 204} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_51411} {RNA1310_6238} {RNA815_21168} Mlig455_023648 {REF} {Length: 217} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_51411} {RNA1310_6238} {RNA815_21168}
7.	MligTC455_38787	26	0.53	Mlig455_063549	Neo: - Age: -		0.964	0.964	-	-	-	-	-	Mlig455_063549 {REF} {Length: 186} {NoTransDecoderORF} {tRNA: His(GTG), score=60.8} {RNA1509_11551}
8.	MligTC455_51169	1374	28.62	Mlig455_040687, Mlig455_064557	Neo: - Age: - Region-specific R5: 1.928 Region-enriched R5: 1.364/0.00014		0.964	-	-	-	0.964	-	-	Mlig455_040687 {REF} {Length: 2502} {TRANSSPLICED} {Dmel: FBgn0033897, Rcd1, Reduction in Cnn dots 1, [RH, Score=92.0, Expect=6e-19]} {RNA1509_10592} {RNA1310_6133, RNA1509_10592} {RNA1509_10592, RNA815_27998} Mlig455_064557 {REF} {Length: 2785} {TRANSSPLICED} {Dmel: FBgn0033897, Rcd1, Reduction in Cnn dots 1, [RH, Score=95.1, Expect=7e-20]} {RNA1509_23821} {RNA1310_6133, RNA1509_23821} {RNA1509_23821, RNA815_27998}
9.	MligTC455_19712	82	1.7	Mlig455_000384	Neo: - Age: -		0.963	0.963	-	-	-	-	-	Mlig455_000384 {REF} {Length: 1367} {NoTransDecoderORF} {RNA1310_88029.2} {RNA815_48482}
10.	MligTC455_22214	237	4.94	Mlig455_019333, Mlig455_019447	Neo: - Age: -	NRG2	0.963	0.963	-	-	-	-	-	Mlig455_019333 {REF} {Length: 4291} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=50.5]; Immunoglobulin domain [PF13927.8, score=44.7]; Immunoglobulin domain [PF00047.27, score=43.9]; Immunoglobulin domain [PF13895.8, score=22.0]} {Human: ENSG00000158458, NRG2, neuregulin 2, [RH, Score=86.7, Expect=8e-17]} {Mouse: ENSMUSG00000060275, Nrg2, neuregulin 2, [RH, Score=81.3, Expect=2e-15]} {Dmel: FBgn0005666, bt, bent, [Score=52.0, Expect=2e-06]} {Celegans: WBGene00000289, cam-1, Tyrosine-protein kinase receptor cam-1, [Score=51.2, Expect=3e-06]} {Smed: dd_Smed_v6_15129_0_1, dd_Smed_v6_15129_0_1, [Score=55.1, Expect=9e-08]} {RNA1509_54517} {RNA1310_8322} {RNA815_13786} Mlig455_019447 {REF} {Length: 4242} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=50.5]; Immunoglobulin domain [PF13927.8, score=44.8]; Immunoglobulin domain [PF00047.27, score=43.9]; Immunoglobulin domain [PF13895.8, score=22.1]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=18.6]} {Human: ENSG00000158458, NRG2, neuregulin 2, [RH, Score=88.6, Expect=2e-17]} {Mouse: ENSMUSG00000060275, Nrg2, neuregulin 2, [RH, Score=83.2, Expect=7e-16]} {Dmel: FBgn0005666, bt, bent, [Score=52.4, Expect=2e-06]} {Celegans: WBGene00000289, cam-1, Tyrosine-protein kinase receptor cam-1, [Score=51.2, Expect=3e-06]} {Smed: dd_Smed_v6_15129_0_1, dd_Smed_v6_15129_0_1, [Score=55.1, Expect=9e-08]} {RNA1509_54517} {RNA1310_8322} {RNA815_13786}
11.	MligTC455_23234	347	7.22	Mlig455_006721	Neo: - Age: -		0.963	0.963	-	-	-	-	-	Mlig455_006721 {REF} {Length: 6078} {Smed: dd_Smed_v6_2802_0_1, dd_Smed_v6_2802_0_1, [RH, Score=584, Expect=0.0]} {RNA1509_1489, RNA1509_26881} {RNA1310_997.1, RNA1509_1489, RNA1509_26881} {RNA1509_1489, RNA1509_26881, RNA815_1017.1}
12.	MligTC455_22411	240	4.99	Mlig455_027900	Neo: - Age: -		0.962	0.962	-	-	-	-	-	Mlig455_027900 {REF} {Length: 3133} {RNA1509_30929, RNA1509_38512} {RNA1310_27672, RNA1509_30929, RNA1509_38512} {RNA1509_30929, RNA1509_38512, RNA815_26534}
13.	MligTC455_45790	737	15.35	Mlig455_038094	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.571	INSIG2	0.962	0.962	-	-	-	-	-	Mlig455_038094 {REF} {Length: 1651} {Pfam: Insulin-induced protein (INSIG) [PF07281.14, score=132.1]} {Human: ENSG00000125629, INSIG2, insulin induced gene 2, [RH, Score=191, Expect=5e-61]} {Mouse: ENSMUSG00000003721, Insig2, insulin induced gene 2, [RH, Score=189, Expect=1e-60]} {Smed: dd_Smed_v6_4422_0_1, dd_Smed_v6_4422_0_1, [RH, Score=146, Expect=2e-44]} {RNA1509_25199, RNA1509_37553} {RNA1310_22158, RNA1509_25199, RNA1509_37553} {RNA1509_25199, RNA1509_37553, RNA815_8602.1}
14.	MligTC455_15996	396	8.26	Mlig455_064976, Mlig455_066809	Neo: - Age: -	ARHGEF17	0.961	0.961	-	-	-	-	-	Mlig455_064976 {REF} {Length: 4968} {Pfam: WD40 repeated domain [PF19056.2, score=146.7]; RhoGEF domain [PF00621.22, score=136.4]} {Human: ENSG00000110237, ARHGEF17, Rho guanine nucleotide exchange factor 17, [Score=233, Expect=6e-61]} {Mouse: ENSMUSG00000032875, Arhgef17, Rho guanine nucleotide exchange factor (GEF) 17, [Score=239, Expect=3e-63]} {Dmel: FBgn0262562, CG43102, [RH, Score=520, Expect=4e-156]} {Celegans: WBGene00019832, osg-1, Rho guanine nucleotide exchange factor osg-1, [RH, Score=240, Expect=2e-64]} {Smed: dd_Smed_v6_2922_0_1, dd_Smed_v6_2922_0_1, [RH, Score=713, Expect=0.0]} {RNA1509_36394} {RNA1310_6117.1} {RNA815_14497} Mlig455_066809 {REF} {Length: 5061} {Pfam: WD40 repeated domain [PF19056.2, score=146.7]; RhoGEF domain [PF00621.22, score=125.9]} {Human: ENSG00000110237, ARHGEF17, Rho guanine nucleotide exchange factor 17, [RH, Score=266, Expect=2e-71]} {Mouse: ENSMUSG00000032875, Arhgef17, Rho guanine nucleotide exchange factor (GEF) 17, [RH, Score=264, Expect=1e-70]} {Dmel: FBgn0262562, CG43102, [RH, Score=503, Expect=8e-150]} {Celegans: WBGene00019832, osg-1, Rho guanine nucleotide exchange factor osg-1, [Score=224, Expect=3e-59]} {Smed: dd_Smed_v6_2922_0_1, dd_Smed_v6_2922_0_1, [RH, Score=691, Expect=0.0]} {RNA1509_36394} {RNA1310_6117.1} {RNA815_23184}
15.	MligTC455_23233	270	5.63	Mlig455_006672	Neo: - Age: -		0.961	0.961	-	-	-	-	-	Mlig455_006672 {REF} {Length: 6289} {Smed: dd_Smed_v6_2802_0_1, dd_Smed_v6_2802_0_1, [RH, Score=582, Expect=0.0]} {RNA1509_1489} {RNA1310_997.1} {RNA815_1017.1}
16.	MligTC455_38786	52	1.08	Mlig455_012325, Mlig455_052427	Neo: Int S/G2/M Age: -		0.96	0.960	-	-	-	-	-	Mlig455_012325 {REF} {Length: 1145} {NoTransDecoderORF} {tRNA: His(GTG), score=60.8} {RNA1509_11551} Mlig455_052427 {REF} {Length: 181} {NoTransDecoderORF} {tRNA: His(GTG), score=60.8} {RNA1509_11551}
17.	MligTC455_46746	155	3.22	Mlig455_050385	Neo: - Age: -	ANKRD11	0.959	0.959	-	-	-	-	-	Mlig455_050385 {REF} {Length: 5095} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=64.7]; Ankyrin repeats (many copies) [PF13637.8, score=63.7]; Ankyrin repeats (many copies) [PF13857.8, score=61.1]; Ankyrin repeat [PF00023.32, score=55.4]; Ankyrin repeat [PF13606.8, score=44.6]} {Human: ENSG00000167522, ANKRD11, ankyrin repeat domain 11, [RH, Score=136, Expect=2e-31]} {Mouse: ENSMUSG00000035569, Ankrd11, ankyrin repeat domain 11, [RH, Score=137, Expect=8e-32]; ENSMUSG00000034647, Ankrd12, ankyrin repeat domain 12, [RH, Score=132, Expect=2e-30]} {Dmel: FBgn0036305, CG10984, [RH, Score=105, Expect=1e-22]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=91.7, Expect=4e-18]} {Smed: dd_Smed_v6_9297_0_1, dd_Smed_v6_9297_0_1, [RH, Score=154, Expect=4e-38]} {RNA1509_17750} {RNA1310_3406, RNA1509_17750} {RNA1509_17750, RNA815_33283}
18.	MligTC455_15992	222	4.63	Mlig455_062899	Neo: - Age: Up-Up-Down		0.958	0.958	-	-	-	-	-	Mlig455_062899 {REF} {Length: 2159} {RNA1509_41203} {RNA1310_21857} {RNA815_12774}
19.	MligTC455_34010	204	4.26	Mlig455_024028, Mlig455_024093	Neo: - Age: Up-Down-Down	KCNC1	0.958	0.958	-	-	-	-	-	Mlig455_024028 {REF} {Length: 3896} {Pfam: Ion transport protein [PF00520.33, score=148.2]; BTB/POZ domain [PF02214.24, score=101.1]; Ion channel [PF07885.18, score=44.0]} {Human: ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [RH, Score=426, Expect=1e-141]; ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [RH, Score=424, Expect=2e-140]; ENSG00000116396, KCNC4, potassium voltage-gated channel subfamily C member 4, [RH, Score=407, Expect=1e-133]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [RH, Score=426, Expect=5e-142]; ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [RH, Score=411, Expect=2e-135]; ENSMUSG00000062785, Kcnc3, potassium voltage gated channel, Shaw-related subfamily, member 3, [RH, Score=408, Expect=1e-132]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [RH, Score=710, Expect=0.0]} {Celegans: WBGene00004793, shw-3, SHaW family of potassium channels; Voltage-gated K+ channel isoform 1, [RH, Score=590, Expect=0.0]} {Smed: dd_Smed_v6_9740_0_1, dd_Smed_v6_9740_0_1, [RH, Score=689, Expect=0.0]} {RNA1509_54375} {RNA1310_15083.2} {RNA815_13734} Mlig455_024093 {REF} {Length: 3992} {Pfam: Ion transport protein [PF00520.33, score=148.2]; BTB/POZ domain [PF02214.24, score=101.1]; Ion channel [PF07885.18, score=44.0]} {Human: ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [RH, Score=426, Expect=1e-141]; ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [RH, Score=424, Expect=2e-140]; ENSG00000116396, KCNC4, potassium voltage-gated channel subfamily C member 4, [RH, Score=407, Expect=1e-133]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [RH, Score=426, Expect=5e-142]; ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [RH, Score=411, Expect=2e-135]; ENSMUSG00000062785, Kcnc3, potassium voltage gated channel, Shaw-related subfamily, member 3, [RH, Score=408, Expect=1e-132]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [RH, Score=710, Expect=0.0]} {Celegans: WBGene00004793, shw-3, SHaW family of potassium channels; Voltage-gated K+ channel isoform 1, [RH, Score=590, Expect=0.0]} {Smed: dd_Smed_v6_9740_0_1, dd_Smed_v6_9740_0_1, [RH, Score=689, Expect=0.0]} {RNA1509_54375} {RNA1310_15083.2} {RNA815_13734}
20.	MligTC455_04854	57	1.18	Mlig455_032030	Neo: - Age: - Region-enriched R2: 5.099/0.03475		0.957	0.957	-	-	-	-	-	Mlig455_032030 {REF} {Length: 1388} {RNA1310_84273}
21.	MligTC455_47565	196	4.08	Mlig455_022176	Neo: - Age: -	GATAD1	0.957	-	-	-	0.957	-	-	Mlig455_022176 {REF} {Length: 1469} {TRANSSPLICED} {Human: ENSG00000157259, GATAD1, GATA zinc finger domain containing 1, [Score=82.4, Expect=4e-18]} {Mouse: ENSMUSG00000007415, Gatad1, GATA zinc finger domain containing 1, [Score=80.9, Expect=1e-17]} {RNA1509_44979} {RNA1310_57214.1} {RNA815_28936}
22.	MligTC455_39862	267	5.57	Mlig455_042377	Neo: - Age: Up-Down-Up		0.956	0.956	-	-	-	-	-	Mlig455_042377 {REF} {Length: 5070} {Pfam: AIG1 family [PF04548.18, score=31.6]; Septin [PF00735.20, score=25.6]; 50S ribosome-binding GTPase [PF01926.25, score=23.9]; Fibronectin type III domain [PF00041.23, score=23.5]; AAA domain [PF13401.8, score=20.4]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=19.4]} {RNA1509_51423} {RNA1310_2026.1, RNA1509_51423} {RNA1509_51423, RNA815_607.1}
23.	MligTC455_50508	947	19.73	Mlig455_067809	Neo: - Age: Down-Up-Up	UBE2Z	0.952	0.952	-	-	-	-	-	Mlig455_067809 {REF} {Length: 1426} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=80.1]} {Human: ENSG00000159202, UBE2Z, ubiquitin conjugating enzyme E2 Z, [Score=124, Expect=2e-32]} {Mouse: ENSMUSG00000014349, Ube2z, ubiquitin-conjugating enzyme E2Z, [Score=124, Expect=1e-32]} {Dmel: FBgn0266717, Bruce, BIR repeat containing ubiquitin-conjugating enzyme, [Score=75.1, Expect=1e-14]} {Celegans: WBGene00006712, ubc-17, Probable ubiquitin-conjugating enzyme protein 17, [Score=83.2, Expect=1e-17]} {Smed: dd_Smed_v6_2721_0_1, dd_Smed_v6_2721_0_1, [Score=127, Expect=6e-35]} {RNA1509_23001} {RNA1310_23166.1} {RNA815_9851.1}
24.	MligTC455_47290	272	5.67	Mlig455_068255	Neo: - Age: logFC(26M/2M)=0.320	LENG9	0.951	0.951	-	-	-	-	-	Mlig455_068255 {REF} {Length: 3500} {TRANSSPLICED} {Pfam: AKAP7 2'5' RNA ligase-like domain [PF10469.11, score=109.5]; MJ1316 RNA cyclic group end recognition domain [PF04457.14, score=83.3]; 2'-5' RNA ligase superfamily [PF13563.8, score=23.8]; LigT like Phosphoesterase [PF02834.18, score=22.3]} {Human: ENSG00000273574, LENG9, leukocyte receptor cluster member 9, [RH, Score=100, Expect=7e-22]; ENSG00000274495, LENG9, leukocyte receptor cluster member 9, [RH, Score=100, Expect=7e-22]} {Mouse: ENSMUSG00000043432, Leng9, leukocyte receptor cluster (LRC) member 9, [RH, Score=116, Expect=3e-27]} {RNA1509_50306} {RNA1310_7334.1} {RNA815_22553}