TomoSeq data search

Data search

Results for MligTC455_18937

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_18937

358

7.46

Mlig455_037425, Mlig455_037444, Mlig455_037495

Neo: -

Age: logFC(26M/2M)=0.449

Region-enriched R3: 2.325/0.03191

Mlig455_037425 {REF} {Length: 3340} {RNA1509_50644} {RNA1310_41658} {RNA815_24436}

Mlig455_037444 {REF} {Length: 3058} {RNA1509_50644} {RNA1310_41658} {RNA815_24436}

Mlig455_037495 {REF} {Length: 2901} {RNA1509_50644} {RNA1310_41658, RNA1509_50644} {RNA1509_50644, RNA815_24436}

Cumulative graph for MligTC455_18937

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.377	3.475	0.11690	0.70519
RegionR2	-1.619	3.475	0.28931	0.67769
RegionR3	2.325	3.475	0.00110	0.03191
RegionR4	1.309	3.475	0.13191	0.36833
RegionR5	1.007	3.475	0.17687	0.45114
RegionR6	1.132	3.475	0.16629	0.72163
RegionR7	-0.799	3.475	0.54670	1.00000
RegionR8	1.022	3.475	0.31450	0.94704

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-2.09	3.475	0.76472	1.00000
RegenerationR2	0.251	3.475	0.79189	0.98730
RegenerationR3	-1.164	3.475	0.15315	0.58291
RegenerationR4	-0.623	3.475	0.48088	0.85904
RegenerationR5	-0.026	3.475	0.97377	1.00000
RegenerationR6	0.202	3.475	0.80980	0.98283
RegenerationBL	-0.715	3.475	0.46709	0.83352
RegenerationTP	-0.573	3.475	0.59785	0.95972

Genes with expression patterns similar to MligTC455_18937

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_18937	358	7.46	Mlig455_037425, Mlig455_037444, Mlig455_037495	Neo: - Age: logFC(26M/2M)=0.449 Region-enriched R3: 2.325/0.03191		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_037425 {REF} {Length: 3340} {RNA1509_50644} {RNA1310_41658} {RNA815_24436} Mlig455_037444 {REF} {Length: 3058} {RNA1509_50644} {RNA1310_41658} {RNA815_24436} Mlig455_037495 {REF} {Length: 2901} {RNA1509_50644} {RNA1310_41658, RNA1509_50644} {RNA1509_50644, RNA815_24436}
2.	MligTC455_44762	1411	29.4	Mlig455_054505, Mlig455_055363	Neo: - Age: - Region-enriched R4: 1.455/0.00954 Region-enriched R3: 1.386/0.00533 Region-enriched R5: 1.323/0.00126	TMEM144	1.7	0.742	-	-	-	-	0.958	Mlig455_054505 {REF} {Length: 1727} {Pfam: Transmembrane family, TMEM144 of transporters [PF07857.14, score=343.3]; Sugar transport protein [PF06800.14, score=32.7]} {Human: ENSG00000164124, TMEM144, transmembrane protein 144, [RH, Score=263, Expect=1e-84]} {Mouse: ENSMUSG00000027956, Tmem144, transmembrane protein 144, [RH, Score=274, Expect=3e-89]} {Celegans: WBGene00020096, R144.6, Transmembrane protein 144 homolog, [RH, Score=249, Expect=7e-80]} {Smed: dd_Smed_v6_4971_0_1, dd_Smed_v6_4971_0_1, [RH, Score=223, Expect=3e-69]} {RNA1509_20314} {RNA1310_19532, RNA1509_20314} {RNA1509_20314, RNA815_8427} Mlig455_055363 {REF} {Length: 1660} {Pfam: Transmembrane family, TMEM144 of transporters [PF07857.14, score=343.3]; Sugar transport protein [PF06800.14, score=32.7]} {Human: ENSG00000164124, TMEM144, transmembrane protein 144, [RH, Score=263, Expect=1e-84]} {Mouse: ENSMUSG00000027956, Tmem144, transmembrane protein 144, [RH, Score=274, Expect=3e-89]} {Celegans: WBGene00020096, R144.6, Transmembrane protein 144 homolog, [RH, Score=249, Expect=7e-80]} {Smed: dd_Smed_v6_4971_0_1, dd_Smed_v6_4971_0_1, [RH, Score=223, Expect=3e-69]} {RNA1509_20314, RNA1509_24963, RNA1509_31718} {RNA1310_19532, RNA1509_24963, RNA1509_31718} {RNA1509_24963, RNA1509_31718, RNA815_8427}
3.	MligTC455_44763	706	14.71	Mlig455_055422	Neo: - Age: - Region-enriched R4: 1.754/0.00115 Region-enriched R5: 1.353/0.00093 Region-enriched R3: 1.299/0.01581	TMEM144	1.699	0.741	-	-	-	-	0.958	Mlig455_055422 {REF} {Length: 1371} {Pfam: Transmembrane family, TMEM144 of transporters [PF07857.14, score=121.8]} {Human: ENSG00000164124, TMEM144, transmembrane protein 144, [Score=89.7, Expect=2e-19]} {Mouse: ENSMUSG00000027956, Tmem144, transmembrane protein 144, [Score=97.4, Expect=2e-22]} {Celegans: WBGene00020096, R144.6, Transmembrane protein 144 homolog, [Score=102, Expect=2e-24]} {Smed: dd_Smed_v6_4971_0_1, dd_Smed_v6_4971_0_1, [Score=102, Expect=1e-24]} {RNA1509_20314} {RNA1310_19532} {RNA815_8427}
4.	MligTC455_13192	671	13.98	Mlig455_002614	Neo: - Age: - Region-enriched R4: 1.373/0.02456 Region-enriched R3: 1.194/0.03102		1.693	-	-	-	0.720	-	0.973	Mlig455_002614 {REF} {Length: 3568} {RNA1509_30667, RNA1509_40798} {RNA1310_11136.1, RNA1509_30667, RNA1509_40798} {RNA1509_30667, RNA1509_40798, RNA815_5021.1}
5.	MligTC455_17304	101	2.1	Mlig455_031437	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-2.250 Region-enriched R3: 3.738/0.00900		0.972	-	-	-	0.972	-	-	Mlig455_031437 {REF} {Length: 1340} {NoTransDecoderORF} {RNA1509_15660} {RNA1310_6657.1} {RNA815_2791.1}

Berezikov Lab - 2020-2021 © ERIBA