TomoSeq data search

Data search

Results for MligTC455_18956

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_18956	81	1.69	Mlig455_037725	Neo: - Age: Up-Up-Down Region-enriched R4: 3.976/0.03555		Mlig455_037725 {REF} {Length: 1563} {NoTransDecoderORF} {RNA1509_51644} {RNA1310_26321, RNA1509_51644} {RNA1509_51644, RNA815_13270.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_18956

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.646	1.646	0.65115	1.00000
RegionR2	-2.345	1.646	1.00000	1.00000
RegionR3	-0.652	1.646	0.97361	1.00000
RegionR4	3.976	1.646	0.00486	0.03555
RegionR5	-0.151	1.646	0.90815	1.00000
RegionR6	-1.893	1.646	0.99919	1.00000
RegionR7	1.774	1.646	0.16150	0.74247
RegionR8	1.936	1.646	0.20820	0.80912

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.557	1.646	1.00000	1.00000
RegenerationR2	1.066	1.646	0.21089	0.65807
RegenerationR3	-0.369	1.646	0.72681	0.95671
RegenerationR4	-1.69	1.646	0.11010	0.50947
RegenerationR5	0.915	1.646	0.38381	0.78854
RegenerationR6	1.967	1.646	0.12699	0.43834
RegenerationBL	0.965	1.646	0.32768	0.69396
RegenerationTP	-4.702	1.646	0.00408	0.10653

Genes with expression patterns similar to MligTC455_18956

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_18956	81	1.69	Mlig455_037725	Neo: - Age: Up-Up-Down Region-enriched R4: 3.976/0.03555		5	1.000	-	1.000	1.000	1.000	1.000	Mlig455_037725 {REF} {Length: 1563} {NoTransDecoderORF} {RNA1509_51644} {RNA1310_26321, RNA1509_51644} {RNA1509_51644, RNA815_13270.1}
2.	MligTC455_44927	184	3.84	Mlig455_024805, Mlig455_024882, Mlig455_068448	Neo: - Age: logFC(26M/2M)=-0.404	GLT1D1	0.97	-	-	-	-	0.970	-	Mlig455_024805 {REF} {Length: 2669} {Pfam: Glycosyl transferases group 1 [PF00534.22, score=52.2]; Glycosyl transferases group 1 [PF13692.8, score=46.8]} {Human: ENSG00000151948, GLT1D1, glycosyltransferase 1 domain containing 1, [Score=107, Expect=9e-26]} {Mouse: ENSMUSG00000049971, Glt1d1, glycosyltransferase 1 domain containing 1, [Score=107, Expect=6e-26]} {Smed: dd_Smed_v6_8687_0_2, dd_Smed_v6_8687_0_2, [Score=120, Expect=6e-31]} {RNA1509_42592} {RNA1310_19290.1} {RNA815_9094} Mlig455_024882 {REF} {Length: 5129} {Pfam: Glycosyl transferases group 1 [PF00534.22, score=52.0]; Glycosyl transferases group 1 [PF13692.8, score=46.4]} {Human: ENSG00000151948, GLT1D1, glycosyltransferase 1 domain containing 1, [RH, Score=116, Expect=4e-29]} {Mouse: ENSMUSG00000049971, Glt1d1, glycosyltransferase 1 domain containing 1, [RH, Score=124, Expect=4e-32]} {Smed: dd_Smed_v6_8687_0_2, dd_Smed_v6_8687_0_2, [RH, Score=144, Expect=7e-40]} {RNA1509_42592} {RNA1310_19290.1} {RNA815_9094} Mlig455_068448 {REF} {Length: 2513} {Pfam: Glycosyl transferases group 1 [PF00534.22, score=51.2]; Glycosyl transferases group 1 [PF13692.8, score=45.8]} {Human: ENSG00000151948, GLT1D1, glycosyltransferase 1 domain containing 1, [RH, Score=116, Expect=6e-29]} {Mouse: ENSMUSG00000049971, Glt1d1, glycosyltransferase 1 domain containing 1, [RH, Score=122, Expect=2e-31]} {Smed: dd_Smed_v6_8687_0_2, dd_Smed_v6_8687_0_2, [RH, Score=142, Expect=4e-39]} {RNA1509_42592} {RNA1310_19290.1, RNA1509_42592} {RNA1509_42592, RNA815_9094}
3.	MligTC455_40344	204	4.26	Mlig455_014118, Mlig455_014127	Neo: - Age: -	DCX	0.95	0.950	-	-	-	-	-	Mlig455_014118 {REF} {Length: 1283} {Pfam: Doublecortin [PF03607.19, score=32.2]} {Mouse: ENSMUSG00000046049, Rp1l1, retinitis pigmentosa 1 homolog like 1, [Score=52.4, Expect=4e-07]} {Smed: dd_Smed_v6_21299_0_2, dd_Smed_v6_21299_0_2, [Score=112, Expect=3e-28]} {RNA1509_10504} {RNA1310_2811} {RNA815_13071} Mlig455_014127 {REF} {Length: 1021} {Pfam: Doublecortin [PF03607.19, score=54.5]} {Human: ENSG00000077279, DCX, doublecortin, [Score=71.2, Expect=1e-13]} {Mouse: ENSMUSG00000031285, Dcx, doublecortin, [Score=71.2, Expect=1e-13]} {Dmel: FBgn0259099, DCX-EMAP, Doublecortin-domain-containing echinoderm-microtubule-associated protein, [Score=71.6, Expect=1e-13]} {Celegans: WBGene00006993, zyg-8, Serine/threonine-protein kinase zyg-8, [Score=68.9, Expect=6e-13]} {Smed: dd_Smed_v6_21299_0_2, dd_Smed_v6_21299_0_2, [Score=165, Expect=9e-48]} {RNA1509_10504} {RNA1310_2811} {RNA815_13071}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_18956

1.69

Mlig455_037725

Neo: -

Age: Up-Up-Down

Region-enriched R4: 3.976/0.03555

1.000

Mlig455_037725 {REF} {Length: 1563} {NoTransDecoderORF} {RNA1509_51644} {RNA1310_26321, RNA1509_51644} {RNA1509_51644, RNA815_13270.1}

MligTC455_44927

184

3.84

Mlig455_024805, Mlig455_024882, Mlig455_068448

Neo: -

Age: logFC(26M/2M)=-0.404

GLT1D1

0.97

0.970

Mlig455_024805 {REF} {Length: 2669} {Pfam: Glycosyl transferases group 1 [PF00534.22, score=52.2]; Glycosyl transferases group 1 [PF13692.8, score=46.8]} {Human: ENSG00000151948, GLT1D1, glycosyltransferase 1 domain containing 1, [Score=107, Expect=9e-26]} {Mouse: ENSMUSG00000049971, Glt1d1, glycosyltransferase 1 domain containing 1, [Score=107, Expect=6e-26]} {Smed: dd_Smed_v6_8687_0_2, dd_Smed_v6_8687_0_2, [Score=120, Expect=6e-31]} {RNA1509_42592} {RNA1310_19290.1} {RNA815_9094}

Mlig455_024882 {REF} {Length: 5129} {Pfam: Glycosyl transferases group 1 [PF00534.22, score=52.0]; Glycosyl transferases group 1 [PF13692.8, score=46.4]} {Human: ENSG00000151948, GLT1D1, glycosyltransferase 1 domain containing 1, [RH, Score=116, Expect=4e-29]} {Mouse: ENSMUSG00000049971, Glt1d1, glycosyltransferase 1 domain containing 1, [RH, Score=124, Expect=4e-32]} {Smed: dd_Smed_v6_8687_0_2, dd_Smed_v6_8687_0_2, [RH, Score=144, Expect=7e-40]} {RNA1509_42592} {RNA1310_19290.1} {RNA815_9094}

Mlig455_068448 {REF} {Length: 2513} {Pfam: Glycosyl transferases group 1 [PF00534.22, score=51.2]; Glycosyl transferases group 1 [PF13692.8, score=45.8]} {Human: ENSG00000151948, GLT1D1, glycosyltransferase 1 domain containing 1, [RH, Score=116, Expect=6e-29]} {Mouse: ENSMUSG00000049971, Glt1d1, glycosyltransferase 1 domain containing 1, [RH, Score=122, Expect=2e-31]} {Smed: dd_Smed_v6_8687_0_2, dd_Smed_v6_8687_0_2, [RH, Score=142, Expect=4e-39]} {RNA1509_42592} {RNA1310_19290.1, RNA1509_42592} {RNA1509_42592, RNA815_9094}

MligTC455_40344

204

4.26

Mlig455_014118, Mlig455_014127

Neo: -

Age: -

DCX

0.95

0.950

Mlig455_014118 {REF} {Length: 1283} {Pfam: Doublecortin [PF03607.19, score=32.2]} {Mouse: ENSMUSG00000046049, Rp1l1, retinitis pigmentosa 1 homolog like 1, [Score=52.4, Expect=4e-07]} {Smed: dd_Smed_v6_21299_0_2, dd_Smed_v6_21299_0_2, [Score=112, Expect=3e-28]} {RNA1509_10504} {RNA1310_2811} {RNA815_13071}

Mlig455_014127 {REF} {Length: 1021} {Pfam: Doublecortin [PF03607.19, score=54.5]} {Human: ENSG00000077279, DCX, doublecortin, [Score=71.2, Expect=1e-13]} {Mouse: ENSMUSG00000031285, Dcx, doublecortin, [Score=71.2, Expect=1e-13]} {Dmel: FBgn0259099, DCX-EMAP, Doublecortin-domain-containing echinoderm-microtubule-associated protein, [Score=71.6, Expect=1e-13]} {Celegans: WBGene00006993, zyg-8, Serine/threonine-protein kinase zyg-8, [Score=68.9, Expect=6e-13]} {Smed: dd_Smed_v6_21299_0_2, dd_Smed_v6_21299_0_2, [Score=165, Expect=9e-48]} {RNA1509_10504} {RNA1310_2811} {RNA815_13071}