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Results for MligTC455_19058

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_19058 7 0.14 Mlig455_006282

Neo: -

Age: -

 Mlig455_006282 {REF} {Length: 886} {RNA1310_107137}

Cumulative graph for MligTC455_19058

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_19058

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_19058 7 0.14 Mlig455_006282

Neo: -

Age: -

 1 1.000 - - - - - Mlig455_006282 {REF} {Length: 886} {RNA1310_107137}
2. MligTC455_18998 8 0.16 Mlig455_001210

Neo: -

Age: -

 0.987 0.987 - - - - - Mlig455_001210 {REF} {Length: 578} {NoTransDecoderORF} {RNA1310_49000} {RNA815_33489}
3. MligTC455_11233 14 0.29 Mlig455_027769

Neo: Int S/G2/M

Age: Up-Down-Down

 0.986 0.986 - - - - - Mlig455_027769 {REF} {Length: 880} {NoTransDecoderORF} {RNA1509_22816} {RNA1310_44682} {RNA815_26712}
4. MligTC455_02683 8 0.16 Mlig455_024203

Neo: -

Age: -

 0.98 0.980 - - - - - Mlig455_024203 {REF} {Length: 715} {RNA1509_20304} {RNA1310_3911.1} {RNA815_35697}
5. MligTC455_08219 7 0.14 Mlig455_049440

Neo: -

Age: -

 0.979 0.979 - - - - - Mlig455_049440 {REF} {Length: 172} {NoTransDecoderORF}
6. MligTC455_05550 64 1.34 Mlig455_002463

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 3.253/0.01412

 0.965 0.965 - - - - - Mlig455_002463 {REF} {Length: 1403} {Pfam: DDE superfamily endonuclease [PF13358.8, score=44.5]} {Smed: dd_Smed_v6_5882_0_1, dd_Smed_v6_5882_0_1, [Score=53.9, Expect=3e-09]} {RNA1310_30707.1} {RNA815_14917.1}
7. MligTC455_07357 24 0.5 Mlig455_032505, Mlig455_068683

Neo: Germline

Age: -

Region-enriched R4: 3.658/0.01665

 0.961 0.961 - - - - -

Mlig455_032505 {REF} {Length: 566} {RNA1310_46436}

Mlig455_068683 {REF} {Length: 895} {RNA1310_46436} {RNA815_49083}
8. MligTC455_38628 6 0.12 Mlig455_066441

Neo: -

Age: -

 0.96 0.960 - - - - - Mlig455_066441 {REF} {Length: 225} {TRANSSPLICED}
9. MligTC455_07424 29 0.6 Mlig455_052614

Neo: -

Age: -

 0.958 0.958 - - - - - Mlig455_052614 {REF} {Length: 721} {RNA1310_31171}
10. MligTC455_26175 77 1.61 Mlig455_001462, Mlig455_004850, Mlig455_030045, Mlig455_039017

Neo: -

Age: -

Region-enriched R2: 5.289/0.03235

 NYNRIN 0.957 0.957 - - - - -

Mlig455_001462 {REF} {Length: 3779} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=102.0]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=96.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=70.1]; Integrase zinc binding domain [PF17921.3, score=52.3]; Integrase core domain [PF00665.28, score=49.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=45.5]; Aspartyl protease [PF13650.8, score=33.1]; Retroviral aspartyl protease [PF00077.22, score=19.5]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=77.0, Expect=2e-13]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=77.8, Expect=8e-14]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=271, Expect=2e-75]} {RNA1509_38388} {RNA1310_4763.1} {RNA815_16141}

Mlig455_004850 {REF} {Length: 4349} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=102.0]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=96.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=70.1]; Integrase zinc binding domain [PF17921.3, score=52.3]; Integrase core domain [PF00665.28, score=49.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=45.5]; Aspartyl protease [PF13650.8, score=33.1]; Retroviral aspartyl protease [PF00077.22, score=19.5]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=77.0, Expect=2e-13]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=77.8, Expect=8e-14]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=271, Expect=2e-75]} {RNA1509_38388} {RNA1310_4763.1} {RNA815_16141}

Mlig455_030045 {REF} {Length: 4782} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=101.7]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=96.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=70.6]; Integrase zinc binding domain [PF17921.3, score=52.5]; Integrase core domain [PF00665.28, score=49.6]; gag-polyprotein putative aspartyl protease [PF13975.8, score=44.5]; Aspartyl protease [PF13650.8, score=32.9]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=78.6, Expect=5e-14]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=77.8, Expect=6e-14]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=265, Expect=5e-74]} {RNA1509_38388, RNA1509_56442} {RNA1310_4763.1, RNA1509_38388, RNA1509_56442} {RNA1509_38388, RNA1509_56442, RNA815_16141}

Mlig455_039017 {REF} {Length: 4349} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=101.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=96.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=70.1]; Integrase zinc binding domain [PF17921.3, score=52.5]; Integrase core domain [PF00665.28, score=48.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=45.7]; Aspartyl protease [PF13650.8, score=32.2]; Retroviral aspartyl protease [PF00077.22, score=19.2]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=76.6, Expect=3e-13]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=76.6, Expect=2e-13]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=73.6, Expect=2e-12]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=73.6, Expect=2e-12]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=268, Expect=2e-74]} {RNA1509_38388} {RNA1310_4763.1} {RNA815_16141}
11. MligTC455_02012 3 0.07 Mlig455_053537

Neo: -

Age: -

 0.955 0.955 - - - - - Mlig455_053537 {REF} {Length: 595} {RNA1310_70706} {RNA815_36947}
12. MligTC455_10715 16 0.33 Mlig455_003415

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.674

Regeneration-downregulated R4: -6.044

Regeneration-depleted R4: -6.044

 0.951 0.951 - - - - - Mlig455_003415 {REF} {Length: 436} {NoTransDecoderORF} {RNA1509_24834} {RNA1310_5898.1} {RNA815_31793}
13. MligTC455_03461 41 0.85 Mlig455_008624, Mlig455_030301

Neo: -

Age: -

 0.95 0.950 - - - - -

Mlig455_008624 {REF} {Length: 1156} {RNA1509_1367} {RNA1310_36629} {RNA815_34010}

Mlig455_030301 {REF} {Length: 3265} {RNA1509_56822} {RNA1310_36629} {RNA815_1171.1}
14. MligTC455_08009 4 0.08 Mlig455_011682

Neo: -

Age: logFC(26M/2M)=0.643

 SETMAR 0.95 0.950 - - - - - Mlig455_011682 {REF} {Length: 940} {TRANSSPLICED} {Pfam: DDE superfamily endonuclease [PF13358.8, score=26.8]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=89.4, Expect=4e-21]} {Smed: dd_Smed_v6_52102_0_1, dd_Smed_v6_52102_0_1, [Score=64.7, Expect=2e-14]} {RNA1509_17190} {RNA1310_19580} {RNA815_362.1}

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