TomoSeq data search

Data search

Results for MligTC455_19073

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_19073

313

6.53

Mlig455_020186

Neo: -

Age: logFC(26M/2M)=-0.570

Region-enriched R2: 3.549/0.00123
Region-enriched R7: 2.544/0.02449

KCNIP1

Mlig455_020186 {REF} {Length: 1360} {Pfam: EF-hand domain pair [PF13499.8, score=56.9]; EF hand [PF00036.34, score=56.5]; EF-hand domain [PF13405.8, score=54.0]; EF hand [PF13202.8, score=47.4]; EF-hand domain pair [PF13833.8, score=41.7]} {Human: ENSG00000182132, KCNIP1, potassium voltage-gated channel interacting protein 1, [Score=161, Expect=7e-49]; ENSG00000185774, KCNIP4, potassium voltage-gated channel interacting protein 4, [Score=157, Expect=8e-47]} {Mouse: ENSMUSG00000053519, Kcnip1, Kv channel-interacting protein 1, [Score=163, Expect=1e-49]; ENSMUSG00000029088, Kcnip4, Kv channel interacting protein 4, [Score=157, Expect=5e-47]} {Dmel: FBgn0039380, CG5890, [Score=150, Expect=4e-45]} {Celegans: WBGene00015867, ncs-7, Neuronal Calcium Sensor family, [Score=105, Expect=2e-27]} {Smed: dd_Smed_v6_9727_0_1, dd_Smed_v6_9727_0_1, [Score=150, Expect=7e-45]} {RNA1509_34815, RNA1509_50244} {RNA1310_27310, RNA1509_34815, RNA1509_50244} {RNA1509_34815, RNA1509_50244, RNA815_12235}

Cumulative graph for MligTC455_19073

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-7.565	3.089	0.02765	0.43453
RegionR2	3.549	3.089	0.00002	0.00123
RegionR3	0.359	3.089	0.68510	1.00000
RegionR4	-1.385	3.089	0.99502	1.00000
RegionR5	-1.289	3.089	0.99363	1.00000
RegionR6	0.934	3.089	0.30363	0.89475
RegionR7	2.544	3.089	0.00063	0.02449
RegionR8	2.853	3.089	0.00153	0.06205

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.638	3.089	0.99985	1.00000
RegenerationR2	-1.606	3.089	0.00999	0.16071
RegenerationR3	0.226	3.089	0.76643	0.97018
RegenerationR4	-0.477	3.089	0.54331	0.88985
RegenerationR5	0.068	3.089	0.93963	1.00000
RegenerationR6	-0.294	3.089	0.69561	0.92216
RegenerationBL	-3.562	3.089	0.00241	0.04073
RegenerationTP	-1.531	3.089	0.06548	0.41242

Genes with expression patterns similar to MligTC455_19073

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_19073	313	6.53	Mlig455_020186	Neo: - Age: logFC(26M/2M)=-0.570 Region-enriched R2: 3.549/0.00123 Region-enriched R7: 2.544/0.02449	KCNIP1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_020186 {REF} {Length: 1360} {Pfam: EF-hand domain pair [PF13499.8, score=56.9]; EF hand [PF00036.34, score=56.5]; EF-hand domain [PF13405.8, score=54.0]; EF hand [PF13202.8, score=47.4]; EF-hand domain pair [PF13833.8, score=41.7]} {Human: ENSG00000182132, KCNIP1, potassium voltage-gated channel interacting protein 1, [Score=161, Expect=7e-49]; ENSG00000185774, KCNIP4, potassium voltage-gated channel interacting protein 4, [Score=157, Expect=8e-47]} {Mouse: ENSMUSG00000053519, Kcnip1, Kv channel-interacting protein 1, [Score=163, Expect=1e-49]; ENSMUSG00000029088, Kcnip4, Kv channel interacting protein 4, [Score=157, Expect=5e-47]} {Dmel: FBgn0039380, CG5890, [Score=150, Expect=4e-45]} {Celegans: WBGene00015867, ncs-7, Neuronal Calcium Sensor family, [Score=105, Expect=2e-27]} {Smed: dd_Smed_v6_9727_0_1, dd_Smed_v6_9727_0_1, [Score=150, Expect=7e-45]} {RNA1509_34815, RNA1509_50244} {RNA1310_27310, RNA1509_34815, RNA1509_50244} {RNA1509_34815, RNA1509_50244, RNA815_12235}
2.	MligTC455_51382	250	5.2	Mlig455_024597	Neo: - Age: Down-Up-Up		2.658	-	-	0.892	-	0.801	0.965	Mlig455_024597 {REF} {Length: 2189} {Smed: dd_Smed_v6_14508_0_1, dd_Smed_v6_14508_0_1, [RH, Score=73.2, Expect=5e-15]} {RNA1509_27432} {RNA1310_28268} {RNA815_20912}
3.	MligTC455_48581	806	16.8	Mlig455_062663	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.570 Region-enriched R7: 2.344/0.00001 Regeneration-downregulated BL: -3.037 Regeneration-depleted BL: -3.037	SLC17A8	2.523	-	-	0.969	-	0.815	0.739	Mlig455_062663 {REF} {Length: 3174} {Pfam: Major Facilitator Superfamily [PF07690.18, score=135.5]} {Human: ENSG00000179520, SLC17A8, solute carrier family 17 member 8, [Score=365, Expect=2e-118]; ENSG00000091664, SLC17A6, solute carrier family 17 member 6, [Score=359, Expect=5e-116]; ENSG00000104888, SLC17A7, solute carrier family 17 member 7, [Score=353, Expect=4e-114]} {Mouse: ENSMUSG00000030500, Slc17a6, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6, [Score=360, Expect=2e-116]; ENSMUSG00000019935, Slc17a8, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8, [Score=357, Expect=2e-115]; ENSMUSG00000070570, Slc17a7, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7, [Score=353, Expect=3e-114]} {Dmel: FBgn0031424, VGlut, Vesicular glutamate transporter, [Score=303, Expect=3e-94]} {Celegans: WBGene00001135, eat-4, Probable vesicular glutamate transporter eat-4, [Score=302, Expect=6e-95]} {Smed: dd_Smed_v6_9843_0_1, dd_Smed_v6_9843_0_1, [RH, Score=428, Expect=2e-144]} {RNA1509_12326} {RNA1310_12270} {RNA815_3507}
4.	MligTC455_31031	361	7.53	Mlig455_009779	Neo: - Age: - Region-enriched R2: 2.821/0.00350	LRRN3	2.472	-	-	0.730	0.790	-	0.952	Mlig455_009779 {REF} {Length: 3647} {Pfam: Immunoglobulin domain [PF13927.8, score=35.5]; Immunoglobulin I-set domain [PF07679.18, score=34.5]; Immunoglobulin domain [PF00047.27, score=29.1]; Apolipoprotein A1/A4/E domain [PF01442.20, score=19.2]} {Human: ENSG00000173114, LRRN3, leucine rich repeat neuronal 3, [Score=56.2, Expect=2e-07]} {Dmel: FBgn0032479, CG16974, [RH, Score=116, Expect=3e-26]} {RNA1509_10344} {RNA1310_3046.1} {RNA815_12103}
5.	MligTC455_51918	412	8.59	Mlig455_010427	Neo: - Age: Down-Up-Down	PDE9A	2.425	-	-	-	0.746	0.968	0.711	Mlig455_010427 {REF} {Length: 2436} {Pfam: 3'5'-cyclic nucleotide phosphodiesterase [PF00233.21, score=236.0]} {Human: ENSG00000160191, PDE9A, phosphodiesterase 9A, [Score=271, Expect=2e-84]} {Mouse: ENSMUSG00000041119, Pde9a, phosphodiesterase 9A, [Score=267, Expect=2e-82]} {Dmel: FBgn0259171, Pde9, Phosphodiesterase 9, [Score=295, Expect=3e-87]} {Celegans: WBGene00020114, pde-4, Probable 3',5'-cyclic phosphodiesterase pde-4, [Score=142, Expect=2e-36]} {Smed: dd_Smed_v6_13304_0_1, dd_Smed_v6_13304_0_1, [Score=289, Expect=8e-91]} {RNA1509_6542} {RNA1310_10283, RNA1509_6542} {RNA1509_6542, RNA815_3792.1}
6.	MligTC455_50627	260	5.41	Mlig455_016566, Mlig455_016617	Neo: - Age: - Region-enriched R2: 2.464/0.02538		1.827	-	-	0.870	0.957	-	-	Mlig455_016566 {REF} {Length: 1108} {Pfam: Universal stress protein family [PF00582.28, score=89.8]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=110, Expect=1e-30]} {RNA1310_31742} {RNA815_15537} Mlig455_016617 {REF} {Length: 1220} {Pfam: Universal stress protein family [PF00582.28, score=89.9]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=110, Expect=1e-30]} {RNA1310_31742} {RNA815_15537}
7.	MligTC455_44601	70	1.46	Mlig455_045952	Neo: - Age: Up-Down-Down	RGS20	1.813	-	-	-	0.962	-	0.851	Mlig455_045952 {REF} {Length: 2255} {Pfam: Regulator of G protein signaling domain [PF00615.21, score=70.3]} {Human: ENSG00000147509, RGS20, regulator of G protein signaling 20, [Score=131, Expect=3e-39]; ENSG00000171700, RGS19, regulator of G protein signaling 19, [Score=129, Expect=1e-38]; ENSG00000091844, RGS17, regulator of G protein signaling 17, [Score=126, Expect=2e-37]} {Mouse: ENSMUSG00000002459, Rgs20, regulator of G-protein signaling 20, [Score=130, Expect=3e-39]; ENSMUSG00000002458, Rgs19, regulator of G-protein signaling 19, [Score=127, Expect=4e-38]} {Dmel: FBgn0028743, Dhit, Double hit, [Score=137, Expect=1e-41]} {Celegans: WBGene00004345, rgs-2, Regulator of G-protein signaling rgs-2, [Score=118, Expect=2e-35]} {Smed: dd_Smed_v6_8877_0_1, dd_Smed_v6_8877_0_1, [Score=129, Expect=4e-37]} {RNA1509_42017} {RNA1310_40205.1} {RNA815_12760}
8.	MligTC455_26516	91	1.89	Mlig455_067852	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.554		1.722	-	-	-	0.763	0.959	-	Mlig455_067852 {REF} {Length: 1235} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=20.3]} {Smed: dd_Smed_v6_6819_0_1, dd_Smed_v6_6819_0_1, [Score=106, Expect=2e-27]} {RNA1310_8376} {RNA815_4529}
9.	MligTC455_32212	2136	44.51	Mlig455_012746, Mlig455_057833, Mlig455_057843	Neo: - Age: Up-Down-Down Region-enriched R8: 1.421/0.00123	DST	0.975	-	-	-	-	0.975	-	Mlig455_012746 {REF} {Length: 33009} {Pfam: Spectrin repeat [PF00435.23, score=332.1]; Growth-Arrest-Specific Protein 2 Domain [PF02187.19, score=101.0]; EF hand [PF00036.34, score=35.3]; EF-hand domain pair [PF13499.8, score=31.7]; EF hand [PF13202.8, score=31.1]; EF-hand domain [PF13405.8, score=30.7]} {Human: ENSG00000151914, DST, dystonin, [RH, Score=898, Expect=0.0]} {Mouse: ENSMUSG00000026131, Dst, dystonin, [RH, Score=828, Expect=0.0]} {Dmel: FBgn0013733, shot, short stop, [Score=966, Expect=0.0]} {Celegans: WBGene00006876, vab-10, VAB-10B protein, [Score=469, Expect=1e-131]} {Smed: dd_Smed_v6_1205_0_15, dd_Smed_v6_1205_0_15, [Score=757, Expect=0.0]} {RNA1509_6278} {RNA1310_33.1} {RNA815_47} Mlig455_057833 {REF} {Length: 22108} {Pfam: Spectrin repeat [PF00435.23, score=327.8]; Growth-Arrest-Specific Protein 2 Domain [PF02187.19, score=101.5]; Plectin repeat [PF00681.22, score=49.8]; EF hand [PF00036.34, score=36.5]; EF hand [PF13202.8, score=32.3]; EF-hand domain [PF13405.8, score=32.0]; EF-hand domain pair [PF13499.8, score=27.4]} {Human: ENSG00000151914, DST, dystonin, [RH, Score=902, Expect=0.0]} {Mouse: ENSMUSG00000028649, Macf1, microtubule-actin crosslinking factor 1, [Score=875, Expect=0.0]; ENSMUSG00000026131, Dst, dystonin, [Score=847, Expect=0.0]} {Dmel: FBgn0013733, shot, short stop, [Score=954, Expect=0.0]} {Celegans: WBGene00006876, vab-10, VAB-10B protein, [RH, Score=536, Expect=1e-151]} {Smed: dd_Smed_v6_1205_0_16, dd_Smed_v6_1205_0_16, [Score=773, Expect=0.0]} {RNA1509_20864, RNA1509_6278} {RNA1310_33.1, RNA1509_20864} {RNA1509_20864, RNA815_47} Mlig455_057843 {REF} {Length: 2887} {Pfam: Nucleoporin FG repeat region [PF13634.8, score=21.5]} {Celegans: WBGene00000033, abu-10, Activated in Blocked Unfolded protein response, [RH, Score=51.2, Expect=1e-06]} {RNA1509_20864} {RNA1310_11565} {RNA815_5243}
10.	MligTC455_16336	65	1.35	Mlig455_004452, Mlig455_015655, Mlig455_023763, Mlig455_037144, Mlig455_057438	Neo: - Age: -		0.968	-	-	-	-	-	0.968	Mlig455_004452 {REF} {Length: 211} {NoTransDecoderORF} {RNA1310_41710} {RNA815_19764} Mlig455_015655 {REF} {Length: 618} {NoTransDecoderORF} {RNA1310_41710} {RNA815_19764} Mlig455_023763 {REF} {Length: 618} {NoTransDecoderORF} {RNA1310_41710} {RNA815_19764} Mlig455_037144 {REF} {Length: 1001} {NoTransDecoderORF} {RNA1310_41710} {RNA815_19764} Mlig455_057438 {REF} {Length: 743} {NoTransDecoderORF} {RNA1310_41710} {RNA815_19764}
11.	MligTC455_21232	518	10.79	Mlig455_003729, Mlig455_003893	Neo: - Age: -	RP1	0.96	-	-	-	0.960	-	-	Mlig455_003729 {REF} {Length: 9766} {TRANSSPLICED} {Pfam: PLAT/LH2 domain [PF01477.25, score=241.2]} {Human: ENSG00000104237, RP1, RP1, axonemal microtubule associated, [Score=465, Expect=2e-138]} {Mouse: ENSMUSG00000025900, Rp1, retinitis pigmentosa 1 (human), [Score=433, Expect=2e-125]} {Dmel: FBgn0035229, pns, pinstripe, [Score=61.2, Expect=1e-08]} {Smed: dd_Smed_v6_10315_0_1, dd_Smed_v6_10315_0_1, [Score=583, Expect=6e-178]} {RNA1509_11896, RNA1509_36099, RNA1509_38002, RNA1509_45398} {RNA1310_1638, RNA1509_36099, RNA1509_38002, RNA1509_45398} {RNA1509_36099, RNA1509_38002, RNA1509_45398, RNA815_162} Mlig455_003893 {REF} {Length: 9769} {TRANSSPLICED} {Pfam: PLAT/LH2 domain [PF01477.25, score=245.2]} {Human: ENSG00000104237, RP1, RP1, axonemal microtubule associated, [Score=469, Expect=1e-139]} {Mouse: ENSMUSG00000025900, Rp1, retinitis pigmentosa 1 (human), [Score=437, Expect=1e-126]} {Dmel: FBgn0035229, pns, pinstripe, [Score=61.2, Expect=1e-08]} {Smed: dd_Smed_v6_10315_0_2, dd_Smed_v6_10315_0_2, [Score=591, Expect=0.0]} {RNA1509_11896, RNA1509_54254} {RNA1310_1638, RNA1509_54254} {RNA1509_54254, RNA815_162}
12.	MligTC455_36142	371	7.73	Mlig455_066875	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.549 Region-enriched R2: 3.692/0.01748		0.96	-	-	0.960	-	-	-	Mlig455_066875 {REF} {Length: 917} {NoTransDecoderORF} {RNA1509_54523} {RNA1310_17531} {RNA815_38390}
13.	MligTC455_43882	195	4.05	Mlig455_035945, Mlig455_067329	Neo: - Age: -	MFSD11	0.959	-	-	-	0.959	-	-	Mlig455_035945 {REF} {Length: 233} {NoTransDecoderORF} Mlig455_067329 {REF} {Length: 3148} {TRANSSPLICED} {Pfam: Ion channel regulatory protein UNC-93 [PF05978.18, score=152.6]; Major Facilitator Superfamily [PF07690.18, score=43.1]} {Human: ENSG00000092931, MFSD11, major facilitator superfamily domain containing 11, [RH, Score=385, Expect=2e-130]} {Mouse: ENSMUSG00000020818, Mfsd11, major facilitator superfamily domain containing 11, [RH, Score=387, Expect=4e-131]} {Dmel: FBgn0038053, CG18549, [RH, Score=315, Expect=2e-103]} {Celegans: WBGene00010925, M153.2, [RH, Score=251, Expect=2e-78]} {Smed: dd_Smed_v6_6305_0_1, dd_Smed_v6_6305_0_1, [RH, Score=320, Expect=2e-105]} {RNA1509_26859, RNA1509_32034, RNA1509_36920, RNA1509_38483} {RNA1310_10975.1, RNA1509_26859, RNA1509_32034, RNA1509_36920, RNA1509_38483} {RNA1509_26859, RNA1509_32034, RNA1509_36920, RNA1509_38483, RNA815_5713}
14.	MligTC455_27107	112	2.34	Mlig455_063632	Neo: - Age: Up-Down-Down		0.955	-	-	-	0.955	-	-	Mlig455_063632 {REF} {Length: 6095} {Pfam: TIR domain [PF13676.8, score=156.9]; Death domain [PF00531.24, score=29.6]; TIR domain [PF01582.22, score=27.3]} {Smed: dd_Smed_v6_12177_0_1, dd_Smed_v6_12177_0_1, [RH, Score=637, Expect=0.0]} {RNA1509_29883} {RNA1310_6245} {RNA815_1037}
15.	MligTC455_08944	160	3.34	Mlig455_050947	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.619		0.954	-	-	-	0.954	-	-	Mlig455_050947 {REF} {Length: 1135} {RNA1310_13460.1} {RNA815_53760}
16.	MligTC455_15893	83	1.72	Mlig455_028039	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.277	NWD1	0.954	-	-	-	0.954	-	-	Mlig455_028039 {REF} {Length: 6589} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=38.2]; NACHT domain [PF05729.14, score=31.1]; AAA ATPase domain [PF13191.8, score=28.7]} {Human: ENSG00000188039, NWD1, NACHT and WD repeat domain containing 1, [Score=172, Expect=1e-42]} {Mouse: ENSMUSG00000048148, Nwd1, NACHT and WD repeat domain containing 1, [Score=189, Expect=1e-47]} {Dmel: FBgn0038397, CG10185, [Score=223, Expect=3e-58]} {Celegans: WBGene00020254, T05C3.2, [Score=228, Expect=6e-60]} {Smed: dd_Smed_v6_11085_0_2, dd_Smed_v6_11085_0_2, [Score=191, Expect=8e-49]} {RNA1509_19081} {RNA1310_611.1, RNA1509_19081} {RNA1509_19081, RNA815_9507}
17.	MligTC455_19527	647	13.49	Mlig455_031533, Mlig455_056996	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_031533 {REF} {Length: 2408} {RNA1509_20198} {RNA1310_6877} {RNA815_3975} Mlig455_056996 {REF} {Length: 2360} {TRANSSPLICED} {RNA1509_20198, RNA1509_57243} {RNA1310_7401.1, RNA1509_20198, RNA1509_57243} {RNA1509_20198, RNA1509_57243, RNA815_3975}
18.	MligTC455_41215	331	6.9	Mlig455_043906	Neo: - Age: Down-Up-Down Region-enriched R2: 1.956/0.00704	INAFM2	0.954	-	-	0.954	-	-	-	Mlig455_043906 {REF} {Length: 1505} {Pfam: TRP-interacting helix [PF15018.8, score=55.6]} {Human: ENSG00000259330, INAFM2, InaF motif containing 2, [RH, Score=69.7, Expect=4e-16]} {Mouse: ENSMUSG00000074918, Inafm2, InaF motif containing 2, [RH, Score=69.7, Expect=3e-16]} {Dmel: FBgn0260812, inaF-D, [RH, Score=55.1, Expect=3e-10]} {Celegans: WBGene00009325, F32D8.15, [RH, Score=49.3, Expect=1e-08]} {Smed: dd_Smed_v6_10333_0_1, dd_Smed_v6_10333_0_1, [Score=61.6, Expect=4e-14]} {RNA1509_31652} {RNA1310_28719.2, RNA1509_31652} {RNA1509_31652, RNA815_21205}

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