TomoSeq data search

Data search

Results for MligTC455_19132

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_19132	1939	40.39	Mlig455_043681	Neo: - Age: -		Mlig455_043681 {REF} {Length: 1523} {TRANSSPLICED} {RNA1509_49363, RNA1509_7484} {RNA1310_3620, RNA1509_49363, RNA1509_7484} {RNA1509_49363, RNA1509_7484, RNA815_29234}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_19132

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.04	5.406	0.95984	1.00000
RegionR2	-1.386	5.406	0.00323	0.04819
RegionR3	0.614	5.406	0.08968	0.52879
RegionR4	0.592	5.406	0.16875	0.43133
RegionR5	-0.044	5.406	0.90276	1.00000
RegionR6	0.382	5.406	0.28488	0.87533
RegionR7	0.451	5.406	0.26047	0.88790
RegionR8	-0.649	5.406	0.21461	0.81904

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.992	5.406	0.30745	1.00000
RegenerationR2	0.081	5.406	0.86283	1.00000
RegenerationR3	-0.024	5.406	0.95688	1.00000
RegenerationR4	0.279	5.406	0.55346	0.89380
RegenerationR5	0.354	5.406	0.43104	0.81869
RegenerationR6	0.246	5.406	0.58986	0.86346
RegenerationBL	1.011	5.406	0.01655	0.13654
RegenerationTP	0.768	5.406	0.11224	0.51479

Genes with expression patterns similar to MligTC455_19132

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_19132	1939	40.39	Mlig455_043681	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_043681 {REF} {Length: 1523} {TRANSSPLICED} {RNA1509_49363, RNA1509_7484} {RNA1310_3620, RNA1509_49363, RNA1509_7484} {RNA1509_49363, RNA1509_7484, RNA815_29234}
2.	MligTC455_30911	11062	230.45	Mlig455_040290, Mlig455_040303	Neo: Neoblast Age: Down-Up-Up, logFC(26M/2M)=0.224 Regeneration-upregulated BL: 1.034 Regeneration-enriched BL: 1.034	SRSF3	0.957	-	-	-	-	0.957	-	Mlig455_040290 {REF} {Length: 1648} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=62.2]; Zinc knuckle [PF00098.25, score=31.1]; RNA recognition motif [PF16367.7, score=29.2]} {Human: ENSG00000112081, SRSF3, serine and arginine rich splicing factor 3, [RH, Score=112, Expect=8e-32]} {Mouse: ENSMUSG00000071172, Srsf3, serine/arginine-rich splicing factor 3, [RH, Score=112, Expect=6e-32]; ENSMUSG00000078134, Gm12355, predicted gene 12355, [RH, Score=111, Expect=2e-31]} {Dmel: FBgn0028554, x16, x16 splicing factor, [Score=107, Expect=1e-28]} {Celegans: WBGene00013293, Y57G11A.5, [RH, Score=83.6, Expect=3e-21]} {Smed: dd_Smed_v6_2424_0_1, dd_Smed_v6_2424_0_1, [RH, Score=126, Expect=8e-38]} {RNA1509_9813} {RNA1310_46496} {RNA815_30103} Mlig455_040303 {REF} {Length: 1648} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=62.2]; Zinc knuckle [PF00098.25, score=31.1]; RNA recognition motif [PF16367.7, score=29.2]} {Human: ENSG00000112081, SRSF3, serine and arginine rich splicing factor 3, [RH, Score=112, Expect=8e-32]} {Mouse: ENSMUSG00000071172, Srsf3, serine/arginine-rich splicing factor 3, [RH, Score=112, Expect=6e-32]; ENSMUSG00000078134, Gm12355, predicted gene 12355, [RH, Score=111, Expect=2e-31]} {Dmel: FBgn0028554, x16, x16 splicing factor, [Score=107, Expect=1e-28]} {Celegans: WBGene00013293, Y57G11A.5, [RH, Score=83.6, Expect=3e-21]} {Smed: dd_Smed_v6_2424_0_1, dd_Smed_v6_2424_0_1, [RH, Score=126, Expect=8e-38]} {RNA1509_18262, RNA1509_24060, RNA1509_32744, RNA1509_39761, RNA1509_54124, RNA1509_54783, RNA1509_58265, RNA1509_8079, RNA1509_9813} {RNA1310_46496, RNA1509_18262, RNA1509_24060, RNA1509_32744, RNA1509_39761, RNA1509_54124, RNA1509_54783, RNA1509_58265, RNA1509_8079} {RNA1509_18262, RNA1509_24060, RNA1509_32744, RNA1509_39761, RNA1509_54124, RNA1509_54783, RNA1509_58265, RNA1509_8079, RNA815_30103}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_19132

1939

40.39

Mlig455_043681

Neo: -

Age: -

1.000

Mlig455_043681 {REF} {Length: 1523} {TRANSSPLICED} {RNA1509_49363, RNA1509_7484} {RNA1310_3620, RNA1509_49363, RNA1509_7484} {RNA1509_49363, RNA1509_7484, RNA815_29234}

MligTC455_30911

11062

230.45

Mlig455_040290, Mlig455_040303

Neo: Neoblast

Age: Down-Up-Up, logFC(26M/2M)=0.224

Regeneration-upregulated BL: 1.034

Regeneration-enriched BL: 1.034

SRSF3

0.957

Mlig455_040290 {REF} {Length: 1648} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=62.2]; Zinc knuckle [PF00098.25, score=31.1]; RNA recognition motif [PF16367.7, score=29.2]} {Human: ENSG00000112081, SRSF3, serine and arginine rich splicing factor 3, [RH, Score=112, Expect=8e-32]} {Mouse: ENSMUSG00000071172, Srsf3, serine/arginine-rich splicing factor 3, [RH, Score=112, Expect=6e-32]; ENSMUSG00000078134, Gm12355, predicted gene 12355, [RH, Score=111, Expect=2e-31]} {Dmel: FBgn0028554, x16, x16 splicing factor, [Score=107, Expect=1e-28]} {Celegans: WBGene00013293, Y57G11A.5, [RH, Score=83.6, Expect=3e-21]} {Smed: dd_Smed_v6_2424_0_1, dd_Smed_v6_2424_0_1, [RH, Score=126, Expect=8e-38]} {RNA1509_9813} {RNA1310_46496} {RNA815_30103}

Mlig455_040303 {REF} {Length: 1648} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=62.2]; Zinc knuckle [PF00098.25, score=31.1]; RNA recognition motif [PF16367.7, score=29.2]} {Human: ENSG00000112081, SRSF3, serine and arginine rich splicing factor 3, [RH, Score=112, Expect=8e-32]} {Mouse: ENSMUSG00000071172, Srsf3, serine/arginine-rich splicing factor 3, [RH, Score=112, Expect=6e-32]; ENSMUSG00000078134, Gm12355, predicted gene 12355, [RH, Score=111, Expect=2e-31]} {Dmel: FBgn0028554, x16, x16 splicing factor, [Score=107, Expect=1e-28]} {Celegans: WBGene00013293, Y57G11A.5, [RH, Score=83.6, Expect=3e-21]} {Smed: dd_Smed_v6_2424_0_1, dd_Smed_v6_2424_0_1, [RH, Score=126, Expect=8e-38]} {RNA1509_18262, RNA1509_24060, RNA1509_32744, RNA1509_39761, RNA1509_54124, RNA1509_54783, RNA1509_58265, RNA1509_8079, RNA1509_9813} {RNA1310_46496, RNA1509_18262, RNA1509_24060, RNA1509_32744, RNA1509_39761, RNA1509_54124, RNA1509_54783, RNA1509_58265, RNA1509_8079} {RNA1509_18262, RNA1509_24060, RNA1509_32744, RNA1509_39761, RNA1509_54124, RNA1509_54783, RNA1509_58265, RNA1509_8079, RNA815_30103}