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Results for MligTC455_19170

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_19170 258 5.38 Mlig455_047913

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.285

 LRRD1 Mlig455_047913 {REF} {Length: 3380} {Pfam: Leucine rich repeat [PF13855.8, score=200.2]; Leucine Rich repeats (2 copies) [PF12799.9, score=161.5]; Leucine-rich repeat [PF14580.8, score=63.8]; Death domain [PF00531.24, score=25.1]; RsmF rRNA methyltransferase first C-terminal domain [PF17126.7, score=19.5]} {Human: ENSG00000240720, LRRD1, leucine rich repeats and death domain containing 1, [RH, Score=264, Expect=3e-76]} {Mouse: ENSMUSG00000040367, Lrrd1, leucine rich repeats and death domain containing 1, [RH, Score=308, Expect=1e-92]} {Dmel: FBgn0038504, Sur-8, [Score=159, Expect=1e-40]} {Celegans: WBGene00004929, soc-2, Leucine-rich repeat protein soc-2, [Score=150, Expect=2e-38]} {Smed: dd_Smed_v6_10136_0_1, dd_Smed_v6_10136_0_1, [RH, Score=285, Expect=2e-86]} {RNA1509_18560, RNA1509_19633, RNA1509_42565} {RNA1310_7039.2, RNA1509_18560, RNA1509_19633, RNA1509_42565} {RNA1509_18560, RNA1509_19633, RNA1509_42565, RNA815_1369.1}

Cumulative graph for MligTC455_19170

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.17 2.951 0.12712 0.72319
RegionR2 1.412 2.951 0.12518 0.43868
RegionR3 1.206 2.951 0.12245 0.60415
RegionR4 1.505 2.951 0.10045 0.30823
RegionR5 0.504 2.951 0.57320 0.93157
RegionR6 1.313 2.951 0.09839 0.57657
RegionR7 0.006 2.951 0.85469 1.00000
RegionR8 0.224 2.951 0.77675 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.007 2.951 0.99991 1.00000
RegenerationR2 -0.02 2.951 0.96887 1.00000
RegenerationR3 -0.429 2.951 0.47363 0.84613
RegenerationR4 -0.475 2.951 0.47726 0.85716
RegenerationR5 0.041 2.951 0.96213 1.00000
RegenerationR6 -1.281 2.951 0.06151 0.31144
RegenerationBL -0.246 2.951 0.75682 1.00000
RegenerationTP -0.548 2.951 0.54561 0.93037


Genes with expression patterns similar to MligTC455_19170

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_19170 258 5.38 Mlig455_047913

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.285

 LRRD1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_047913 {REF} {Length: 3380} {Pfam: Leucine rich repeat [PF13855.8, score=200.2]; Leucine Rich repeats (2 copies) [PF12799.9, score=161.5]; Leucine-rich repeat [PF14580.8, score=63.8]; Death domain [PF00531.24, score=25.1]; RsmF rRNA methyltransferase first C-terminal domain [PF17126.7, score=19.5]} {Human: ENSG00000240720, LRRD1, leucine rich repeats and death domain containing 1, [RH, Score=264, Expect=3e-76]} {Mouse: ENSMUSG00000040367, Lrrd1, leucine rich repeats and death domain containing 1, [RH, Score=308, Expect=1e-92]} {Dmel: FBgn0038504, Sur-8, [Score=159, Expect=1e-40]} {Celegans: WBGene00004929, soc-2, Leucine-rich repeat protein soc-2, [Score=150, Expect=2e-38]} {Smed: dd_Smed_v6_10136_0_1, dd_Smed_v6_10136_0_1, [RH, Score=285, Expect=2e-86]} {RNA1509_18560, RNA1509_19633, RNA1509_42565} {RNA1310_7039.2, RNA1509_18560, RNA1509_19633, RNA1509_42565} {RNA1509_18560, RNA1509_19633, RNA1509_42565, RNA815_1369.1}
2. MligTC455_18253 432 8.99 Mlig455_047965

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 3.489

Region-enriched R4: 1.868/0.00919

 GLMN 0.958 - - - - 0.958 - Mlig455_047965 {REF} {Length: 2789} {TRANSSPLICED} {Pfam: Uncharacterised protein family, YAP/Alf4/glomulin [PF08568.12, score=65.3]} {Human: ENSG00000174842, GLMN, glomulin, FKBP associated protein, [RH, Score=97.8, Expect=8e-21]} {Mouse: ENSMUSG00000029276, Glmn, glomulin, FKBP associated protein, [RH, Score=109, Expect=1e-24]} {Dmel: FBgn0050496, CG30496, [RH, Score=67.0, Expect=3e-11]} {Smed: dd_Smed_v6_9392_0_1, dd_Smed_v6_9392_0_1, [Score=68.9, Expect=3e-12]} {RNA1509_10083, RNA1509_27340, RNA1509_41762, RNA1509_46743, RNA1509_51960} {RNA1310_12822.1, RNA1509_10083, RNA1509_27340, RNA1509_41762, RNA1509_46743, RNA1509_51960} {RNA1509_10083, RNA1509_27340, RNA1509_41762, RNA1509_46743, RNA1509_51960, RNA815_2989.1}
3. MligTC455_18663 961 20.02 Mlig455_026908, Mlig455_030748, Mlig455_030785

Neo: -

Age: -

Region-enriched R2: 1.212/0.02524

 CEP290 0.956 - - - - - 0.956

Mlig455_026908 {REF} {Length: 8633} {Pfam: Coiled-coil region of centrosome protein CE290 [PF16574.7, score=98.4]; Autophagy protein 16 (ATG16) [PF08614.13, score=21.6]; Leucine zipper [PF15294.8, score=21.2]; SWI5-dependent HO expression protein 3 [PF17078.7, score=19.2]} {Human: ENSG00000198707, CEP290, centrosomal protein 290, [RH, Score=997, Expect=0.0]} {Mouse: ENSMUSG00000019971, Cep290, centrosomal protein 290, [RH, Score=985, Expect=0.0]} {Smed: dd_Smed_v6_7145_0_1, dd_Smed_v6_7145_0_1, [RH, Score=1252, Expect=0.0]} {RNA1509_1157, RNA1509_48500} {RNA1310_349, RNA1509_48500} {RNA1509_48500, RNA815_113}

Mlig455_030748 {REF} {Length: 8388} {TRANSSPLICED} {Pfam: Coiled-coil region of centrosome protein CE290 [PF16574.7, score=99.5]} {Human: ENSG00000198707, CEP290, centrosomal protein 290, [Score=620, Expect=0.0]} {Mouse: ENSMUSG00000019971, Cep290, centrosomal protein 290, [Score=525, Expect=9e-158]} {Smed: dd_Smed_v6_7145_0_1, dd_Smed_v6_7145_0_1, [Score=759, Expect=0.0]} {RNA1509_1157} {RNA1310_349} {RNA815_113}

Mlig455_030785 {REF} {Length: 8250} {TRANSSPLICED} {Pfam: Coiled-coil region of centrosome protein CE290 [PF16574.7, score=99.5]} {Human: ENSG00000198707, CEP290, centrosomal protein 290, [Score=620, Expect=0.0]} {Mouse: ENSMUSG00000019971, Cep290, centrosomal protein 290, [Score=525, Expect=9e-158]} {Smed: dd_Smed_v6_7145_0_1, dd_Smed_v6_7145_0_1, [Score=759, Expect=0.0]} {RNA1509_1157} {RNA1310_349} {RNA815_113}
4. MligTC455_20690 198 4.13 Mlig455_066013

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.916

 TMEM145 0.956 - - - - - 0.956 Mlig455_066013 {REF} {Length: 4544} {Pfam: Rhodopsin-like GPCR transmembrane domain [PF10192.11, score=161.8]} {Human: ENSG00000167619, TMEM145, transmembrane protein 145, [RH, Score=241, Expect=5e-72]} {Mouse: ENSMUSG00000043843, Tmem145, transmembrane protein 145, [RH, Score=276, Expect=1e-84]} {Dmel: FBgn0034674, CG9304, [Score=67.0, Expect=2e-11]} {Celegans: WBGene00007595, C15A7.2, [Score=200, Expect=4e-57]} {RNA1509_54390, RNA1509_56975} {RNA1310_10889.1, RNA1509_54390} {RNA1509_54390, RNA815_2731}
5. MligTC455_45481 213 4.44 Mlig455_041828

Neo: -

Age: -

Region-enriched R5: 2.099/0.00443

 WDR4 0.95 - - - - 0.950 - Mlig455_041828 {REF} {Length: 2436} {TRANSSPLICED} {Human: ENSG00000160193, WDR4, WD repeat domain 4, [Score=73.2, Expect=2e-13]} {Mouse: ENSMUSG00000024037, Wdr4, WD repeat domain 4, [RH, Score=73.6, Expect=1e-13]} {Smed: dd_Smed_v6_11186_0_1, dd_Smed_v6_11186_0_1, [Score=80.9, Expect=1e-16]} {RNA1310_24007} {RNA815_9753}

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