TomoSeq data search

Data search

Results for MligTC455_19247

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_19247	64	1.34	Mlig455_048215, Mlig455_048217	Neo: Irradiation Age: Up-Down-Down Region-enriched R5: 3.476/0.02272	FCGBP	Mlig455_048215 {REF} {Length: 712} {Pfam: von Willebrand factor type D domain [PF00094.27, score=24.0]} {Human: ENSG00000275395, FCGBP, Fc fragment of IgG binding protein, [Score=51.6, Expect=5e-07]; ENSG00000135253, KCP, kielin/chordin-like protein, [Score=49.3, Expect=3e-06]; ENSG00000281123, FCGBP, Fc fragment of IgG binding protein, [Score=49.3, Expect=3e-06]} {Mouse: ENSMUSG00000037705, Tecta, tectorin alpha, [Score=50.1, Expect=1e-06]; ENSMUSG00000031963, Bmper, BMP-binding endothelial regulator, [Score=48.9, Expect=2e-06]; ENSMUSG00000059022, Kcp, kielin/chordin-like protein, [Score=48.5, Expect=4e-06]} {Smed: dd_Smed_v6_1636_0_1, dd_Smed_v6_1636_0_1, [Score=92.0, Expect=3e-21]} {RNA1509_2718} {RNA1310_486.1} {RNA815_161} Mlig455_048217 {REF} {Length: 7696} {TRANSSPLICED} {Smed: dd_Smed_v6_416_0_1, dd_Smed_v6_416_0_1, [Score=124, Expect=3e-28]} {RNA1509_2718, RNA1509_40347, RNA1509_54846} {RNA1310_486.2, RNA1509_2718, RNA1509_40347, RNA1509_54846} {RNA1509_2718, RNA1509_40347, RNA1509_54846, RNA815_161}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_19247

1.34

Mlig455_048215, Mlig455_048217

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R5: 3.476/0.02272

FCGBP

Mlig455_048215 {REF} {Length: 712} {Pfam: von Willebrand factor type D domain [PF00094.27, score=24.0]} {Human: ENSG00000275395, FCGBP, Fc fragment of IgG binding protein, [Score=51.6, Expect=5e-07]; ENSG00000135253, KCP, kielin/chordin-like protein, [Score=49.3, Expect=3e-06]; ENSG00000281123, FCGBP, Fc fragment of IgG binding protein, [Score=49.3, Expect=3e-06]} {Mouse: ENSMUSG00000037705, Tecta, tectorin alpha, [Score=50.1, Expect=1e-06]; ENSMUSG00000031963, Bmper, BMP-binding endothelial regulator, [Score=48.9, Expect=2e-06]; ENSMUSG00000059022, Kcp, kielin/chordin-like protein, [Score=48.5, Expect=4e-06]} {Smed: dd_Smed_v6_1636_0_1, dd_Smed_v6_1636_0_1, [Score=92.0, Expect=3e-21]} {RNA1509_2718} {RNA1310_486.1} {RNA815_161}

Mlig455_048217 {REF} {Length: 7696} {TRANSSPLICED} {Smed: dd_Smed_v6_416_0_1, dd_Smed_v6_416_0_1, [Score=124, Expect=3e-28]} {RNA1509_2718, RNA1509_40347, RNA1509_54846} {RNA1310_486.2, RNA1509_2718, RNA1509_40347, RNA1509_54846} {RNA1509_2718, RNA1509_40347, RNA1509_54846, RNA815_161}

Cumulative graph for MligTC455_19247

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.687	1.687	0.99960	1.00000
RegionR2	2.592	1.687	0.99970	1.00000
RegionR3	4.018	1.687	0.00362	0.07695
RegionR4	-5.011	1.687	0.99959	1.00000
RegionR5	3.476	1.687	0.00285	0.02272
RegionR6	2.899	1.687	0.04172	0.38350
RegionR7	-0.3	1.687	0.99974	1.00000
RegionR8	-0.988	1.687	0.99971	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	4.731	1.687	0.99994	1.00000
RegenerationR2	3.796	1.687	0.00742	0.13717
RegenerationR3	3.621	1.687	0.00364	0.10780
RegenerationR4	5.686	1.687	0.00039	0.01839
RegenerationR5	1.215	1.687	0.20198	0.63416
RegenerationR6	2.385	1.687	0.06236	0.31348
RegenerationBL	3.529	1.687	0.10581	0.38395
RegenerationTP	5.258	1.687	0.03606	0.31729

Genes with expression patterns similar to MligTC455_19247

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_19247	64	1.34	Mlig455_048215, Mlig455_048217	Neo: Irradiation Age: Up-Down-Down Region-enriched R5: 3.476/0.02272	FCGBP	5	1.000	1.000	-	1.000	1.000	1.000	Mlig455_048215 {REF} {Length: 712} {Pfam: von Willebrand factor type D domain [PF00094.27, score=24.0]} {Human: ENSG00000275395, FCGBP, Fc fragment of IgG binding protein, [Score=51.6, Expect=5e-07]; ENSG00000135253, KCP, kielin/chordin-like protein, [Score=49.3, Expect=3e-06]; ENSG00000281123, FCGBP, Fc fragment of IgG binding protein, [Score=49.3, Expect=3e-06]} {Mouse: ENSMUSG00000037705, Tecta, tectorin alpha, [Score=50.1, Expect=1e-06]; ENSMUSG00000031963, Bmper, BMP-binding endothelial regulator, [Score=48.9, Expect=2e-06]; ENSMUSG00000059022, Kcp, kielin/chordin-like protein, [Score=48.5, Expect=4e-06]} {Smed: dd_Smed_v6_1636_0_1, dd_Smed_v6_1636_0_1, [Score=92.0, Expect=3e-21]} {RNA1509_2718} {RNA1310_486.1} {RNA815_161} Mlig455_048217 {REF} {Length: 7696} {TRANSSPLICED} {Smed: dd_Smed_v6_416_0_1, dd_Smed_v6_416_0_1, [Score=124, Expect=3e-28]} {RNA1509_2718, RNA1509_40347, RNA1509_54846} {RNA1310_486.2, RNA1509_2718, RNA1509_40347, RNA1509_54846} {RNA1509_2718, RNA1509_40347, RNA1509_54846, RNA815_161}
2.	MligTC455_48668	15	0.32	Mlig455_012920	Neo: - Age: -		0.983	-	-	-	0.983	-	-	Mlig455_012920 {REF} {Length: 270} {NoTransDecoderORF} {RNA1310_67947} {RNA815_57758}
3.	MligTC455_13967	43	0.89	Mlig455_037588	Neo: Irradiation Age: -		0.966	-	-	-	0.966	-	-	Mlig455_037588 {REF} {Length: 3282} {Pfam: BTB/POZ domain [PF00651.33, score=31.2]} {RNA1509_48276} {RNA1310_15382} {RNA815_18645.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts