TomoSeq data search

Data search

Results for MligTC455_19287

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_19287

1114

23.21

Mlig455_017207, Mlig455_017222

Neo: -

Age: Down-Down-Up

KANK1

Mlig455_017207 {REF} {Length: 5365} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=77.6]; Ankyrin repeats (many copies) [PF13857.8, score=76.8]; Ankyrin repeats (many copies) [PF13637.8, score=64.7]; Ankyrin repeat [PF13606.8, score=55.2]; Ankyrin repeat [PF00023.32, score=50.8]} {Human: ENSG00000107104, KANK1, KN motif and ankyrin repeat domains 1, [RH, Score=208, Expect=1e-53]; ENSG00000197256, KANK2, KN motif and ankyrin repeat domains 2, [RH, Score=202, Expect=1e-52]} {Mouse: ENSMUSG00000032702, Kank1, KN motif and ankyrin repeat domains 1, [RH, Score=211, Expect=1e-54]} {Dmel: FBgn0027596, Kank, [RH, Score=198, Expect=3e-51]} {Celegans: WBGene00006882, vab-19, VAB-19, [RH, Score=172, Expect=3e-43]} {Smed: dd_Smed_v6_11252_0_1, dd_Smed_v6_11252_0_1, [Score=211, Expect=1e-59]} {RNA1509_6668} {RNA1310_958.1} {RNA815_17395}

Mlig455_017222 {REF} {Length: 5170} {TRANSSPLICED} {RNA1509_6668} {RNA1310_958.1} {RNA815_24643}

Cumulative graph for MligTC455_19287

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.368	4.77	0.71070	1.00000
RegionR2	0.265	4.77	0.46222	0.84904
RegionR3	-0.207	4.77	0.49478	0.99145
RegionR4	0.129	4.77	0.69679	0.98666
RegionR5	0.007	4.77	0.97755	1.00000
RegionR6	0.212	4.77	0.46798	1.00000
RegionR7	0.114	4.77	0.78673	1.00000
RegionR8	-0.152	4.77	0.79204	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.111	4.77	0.32676	1.00000
RegenerationR2	0.527	4.77	0.04415	0.34727
RegenerationR3	0.553	4.77	0.07637	0.45867
RegenerationR4	-0.193	4.77	0.52729	0.88308
RegenerationR5	0.192	4.77	0.49220	0.85442
RegenerationR6	0.099	4.77	0.75015	0.95230
RegenerationBL	0.577	4.77	0.13061	0.43088
RegenerationTP	0.192	4.77	0.67314	1.00000

Genes with expression patterns similar to MligTC455_19287

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_19287	1114	23.21	Mlig455_017207, Mlig455_017222	Neo: - Age: Down-Down-Up	KANK1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_017207 {REF} {Length: 5365} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=77.6]; Ankyrin repeats (many copies) [PF13857.8, score=76.8]; Ankyrin repeats (many copies) [PF13637.8, score=64.7]; Ankyrin repeat [PF13606.8, score=55.2]; Ankyrin repeat [PF00023.32, score=50.8]} {Human: ENSG00000107104, KANK1, KN motif and ankyrin repeat domains 1, [RH, Score=208, Expect=1e-53]; ENSG00000197256, KANK2, KN motif and ankyrin repeat domains 2, [RH, Score=202, Expect=1e-52]} {Mouse: ENSMUSG00000032702, Kank1, KN motif and ankyrin repeat domains 1, [RH, Score=211, Expect=1e-54]} {Dmel: FBgn0027596, Kank, [RH, Score=198, Expect=3e-51]} {Celegans: WBGene00006882, vab-19, VAB-19, [RH, Score=172, Expect=3e-43]} {Smed: dd_Smed_v6_11252_0_1, dd_Smed_v6_11252_0_1, [Score=211, Expect=1e-59]} {RNA1509_6668} {RNA1310_958.1} {RNA815_17395} Mlig455_017222 {REF} {Length: 5170} {TRANSSPLICED} {RNA1509_6668} {RNA1310_958.1} {RNA815_24643}
2.	MligTC455_19288	556	11.58	Mlig455_048200	Neo: - Age: -	KANK1	5.995	1.000	0.999	1.000	0.997	1.000	0.999	Mlig455_048200 {REF} {Length: 2728} {TRANSSPLICED} {Pfam: Ankyrin repeats (many copies) [PF13857.8, score=83.6]; Ankyrin repeats (3 copies) [PF12796.9, score=81.4]; Ankyrin repeats (many copies) [PF13637.8, score=69.1]; Ankyrin repeat [PF13606.8, score=60.1]; Ankyrin repeat [PF00023.32, score=55.9]} {Human: ENSG00000107104, KANK1, KN motif and ankyrin repeat domains 1, [RH, Score=206, Expect=2e-55]; ENSG00000197256, KANK2, KN motif and ankyrin repeat domains 2, [RH, Score=200, Expect=4e-54]} {Mouse: ENSMUSG00000032702, Kank1, KN motif and ankyrin repeat domains 1, [RH, Score=207, Expect=3e-56]; ENSMUSG00000032194, Kank2, KN motif and ankyrin repeat domains 2, [RH, Score=199, Expect=5e-54]} {Dmel: FBgn0027596, Kank, [RH, Score=197, Expect=1e-52]} {Celegans: WBGene00006882, vab-19, VAB-19, [RH, Score=171, Expect=3e-44]} {Smed: dd_Smed_v6_11252_0_1, dd_Smed_v6_11252_0_1, [RH, Score=226, Expect=2e-67]} {RNA1509_49592} {RNA1310_958.1} {RNA815_12971}
3.	MligTC455_41005	630	13.13	Mlig455_005710	Neo: - Age: logFC(26M/2M)=-0.295 Region-enriched R4: 1.610/0.00488	SLCO5A1	0.968	-	-	-	0.968	-	-	Mlig455_005710 {REF} {Length: 5666} {TRANSSPLICED} {Pfam: Organic Anion Transporter Polypeptide (OATP) family [PF03137.22, score=427.7]; Major Facilitator Superfamily [PF07690.18, score=71.5]} {Human: ENSG00000137571, SLCO5A1, solute carrier organic anion transporter family member 5A1, [Score=318, Expect=2e-94]} {Mouse: ENSMUSG00000025938, Slco5a1, solute carrier organic anion transporter family, member 5A1, [Score=329, Expect=1e-98]} {Dmel: FBgn0032123, Oatp30B, Organic anion transporting polypeptide 30B, [RH, Score=320, Expect=4e-93]} {Celegans: WBGene00018739, F53B1.8, Solute carrier organic anion transporter family member, [Score=226, Expect=3e-62]} {Smed: dd_Smed_v6_8289_0_1, dd_Smed_v6_8289_0_1, [RH, Score=274, Expect=1e-79]} {RNA1509_5566, RNA1509_57847} {RNA1310_5844, RNA1509_5566, RNA1509_57847} {RNA1509_5566, RNA1509_57847, RNA815_3658}
4.	MligTC455_43376	514	10.7	Mlig455_003642	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.256	COL24A1	0.951	-	-	-	0.951	-	-	Mlig455_003642 {REF} {Length: 4631} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=485.0]; Fibrillar collagen C-terminal domain [PF01410.20, score=111.7]} {Human: ENSG00000171502, COL24A1, collagen type XXIV alpha 1 chain, [Score=370, Expect=1e-105]} {Mouse: ENSMUSG00000029661, Col1a2, collagen, type I, alpha 2, [Score=394, Expect=2e-115]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=346, Expect=1e-97]} {Celegans: WBGene00001263, emb-9, Collagen alpha-1(IV) chain, [Score=276, Expect=2e-75]} {Smed: dd_Smed_v6_8075_0_1, dd_Smed_v6_8075_0_1, [Score=473, Expect=1e-142]} {RNA1509_4709} {RNA1310_1394} {RNA815_513}
5.	MligTC455_50048	946	19.71	Mlig455_056892	Neo: - Age: Down-Up-Up	CLYBL	0.951	-	-	-	-	0.951	-	Mlig455_056892 {REF} {Length: 1244} {TRANSSPLICED} {Pfam: HpcH/HpaI aldolase/citrate lyase family [PF03328.16, score=137.9]; C-C_Bond_Lyase of the TIM-Barrel fold [PF15617.8, score=41.0]} {Human: ENSG00000125246, CLYBL, citrate lyase beta like, [RH, Score=192, Expect=5e-58]} {Mouse: ENSMUSG00000025545, Clybl, citrate lyase beta like, [RH, Score=185, Expect=2e-55]} {Celegans: WBGene00007234, C01G10.7, [RH, Score=201, Expect=3e-62]} {Smed: dd_Smed_v6_4186_0_1, dd_Smed_v6_4186_0_1, [RH, Score=190, Expect=8e-58]} {RNA1509_21343} {RNA1310_26559, RNA1509_21343} {RNA1509_21343, RNA815_12048}
6.	MligTC455_52201	712	14.84	Mlig455_000379	Neo: Irradiation Age: Up-Down-Down Region-specific R4: 3.455 Region-enriched R4: 2.637/0.00000 Region-enriched R2: 1.808/0.04958 Regeneration-downregulated R4: -1.839 Regeneration-depleted R4: -1.839	CHEK2	0.951	-	-	-	0.951	-	-	Mlig455_000379 {REF} {Length: 2826} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=205.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=111.0]; FHA domain [PF00498.28, score=45.6]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=25.5]; Kinase-like [PF14531.8, score=19.4]; ABC1 atypical kinase-like domain [PF03109.18, score=19.2]} {Human: ENSG00000183765, CHEK2, checkpoint kinase 2, [Score=231, Expect=1e-67]} {Mouse: ENSMUSG00000029521, Chek2, checkpoint kinase 2, [Score=226, Expect=7e-66]} {Dmel: FBgn0019686, lok, loki, [Score=219, Expect=3e-64]} {Celegans: WBGene00000499, chk-2, Serine/threonine-protein kinase chk-2, [Score=174, Expect=1e-47]} {Smed: dd_Smed_v6_6620_0_1, dd_Smed_v6_6620_0_1, [Score=234, Expect=2e-70]} {RNA1509_3579} {RNA1310_6215, RNA1509_3579} {RNA1509_3579, RNA815_2071.1}

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