TomoSeq data search

Data search

Results for MligTC455_19320

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_19320	153	3.18	Mlig455_020612, Mlig455_044512	Neo: Int S/G2/M Age: - Region-enriched R2: 2.847/0.03093		Mlig455_020612 {REF} {Length: 2642} {TRANSSPLICED} {RNA1509_50453} {RNA1310_16726, RNA1509_50453} {RNA1509_50453, RNA815_9108.1} Mlig455_044512 {REF} {Length: 2619} {TRANSSPLICED} {RNA1509_50453} {RNA1310_16726} {RNA815_9108.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_19320

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.201	2.477	0.24331	0.88967
RegionR2	2.847	2.477	0.00168	0.03093
RegionR3	-0.426	2.477	0.57702	1.00000
RegionR4	-1.933	2.477	0.04304	0.17423
RegionR5	0.139	2.477	0.83970	1.00000
RegionR6	0.335	2.477	0.64775	1.00000
RegionR7	1.094	2.477	0.27232	0.90362
RegionR8	0.145	2.477	0.91913	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-2.205	2.477	0.72297	1.00000
RegenerationR2	-0.01	2.477	0.99709	1.00000
RegenerationR3	0.941	2.477	0.29860	0.72980
RegenerationR4	0.065	2.477	0.95224	1.00000
RegenerationR5	0.855	2.477	0.23865	0.67239
RegenerationR6	0.619	2.477	0.47158	0.78562
RegenerationBL	1.024	2.477	0.34636	0.71371
RegenerationTP	0.537	2.477	0.66738	0.99850

Genes with expression patterns similar to MligTC455_19320

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_19320	153	3.18	Mlig455_020612, Mlig455_044512	Neo: Int S/G2/M Age: - Region-enriched R2: 2.847/0.03093		5	1.000	1.000	1.000	-	1.000	1.000	Mlig455_020612 {REF} {Length: 2642} {TRANSSPLICED} {RNA1509_50453} {RNA1310_16726, RNA1509_50453} {RNA1509_50453, RNA815_9108.1} Mlig455_044512 {REF} {Length: 2619} {TRANSSPLICED} {RNA1509_50453} {RNA1310_16726} {RNA815_9108.1}
2.	MligTC455_30496	506	10.54	Mlig455_026882	Neo: - Age: logFC(26M/2M)=0.358 Region-enriched R4: 2.152/0.01690	MYO6	0.961	-	-	-	-	0.961	-	Mlig455_026882 {REF} {Length: 5927} {TRANSSPLICED} {Pfam: Myosin head (motor domain) [PF00063.23, score=758.2]; Myosin VI cargo binding domain [PF16521.7, score=129.6]; Myosin N-terminal SH3-like domain [PF02736.21, score=30.1]} {Human: ENSG00000196586, MYO6, myosin VI, [Score=910, Expect=0.0]} {Mouse: ENSMUSG00000033577, Myo6, myosin VI, [Score=896, Expect=0.0]} {Dmel: FBgn0011225, jar, jaguar, [Score=881, Expect=0.0]} {Celegans: WBGene00004969, spe-15, [Score=775, Expect=0.0]} {Smed: dd_Smed_v6_4503_0_1, dd_Smed_v6_4503_0_1, [Score=844, Expect=0.0]} {RNA1509_1417} {RNA1310_883} {RNA815_546}
3.	MligTC455_41302	500	10.42	Mlig455_015217	Neo: - Age: - Region-enriched R5: 1.184/0.00692	PHLDB1	0.951	-	-	-	-	0.951	-	Mlig455_015217 {REF} {Length: 4040} {Pfam: PH domain [PF00169.31, score=35.7]; Pleckstrin homology domain [PF15409.8, score=19.2]} {Human: ENSG00000019144, PHLDB1, pleckstrin homology like domain family B member 1, [RH, Score=156, Expect=4e-39]; ENSG00000144824, PHLDB2, pleckstrin homology like domain family B member 2, [RH, Score=154, Expect=5e-38]} {Mouse: ENSMUSG00000048537, Phldb1, pleckstrin homology like domain, family B, member 1, [RH, Score=157, Expect=1e-39]; ENSMUSG00000033149, Phldb2, pleckstrin homology like domain, family B, member 2, [RH, Score=152, Expect=2e-38]} {Dmel: FBgn0260748, CG5004, [RH, Score=126, Expect=3e-29]} {Smed: dd_Smed_v6_7833_0_1, dd_Smed_v6_7833_0_1, [Score=100, Expect=3e-22]} {RNA1509_10118, RNA1509_40792} {RNA1310_1799.2, RNA1509_10118, RNA1509_40792} {RNA1509_10118, RNA1509_40792, RNA815_1523.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_19320

153

3.18

Mlig455_020612, Mlig455_044512

Neo: Int S/G2/M

Age: -

Region-enriched R2: 2.847/0.03093

1.000

Mlig455_020612 {REF} {Length: 2642} {TRANSSPLICED} {RNA1509_50453} {RNA1310_16726, RNA1509_50453} {RNA1509_50453, RNA815_9108.1}

Mlig455_044512 {REF} {Length: 2619} {TRANSSPLICED} {RNA1509_50453} {RNA1310_16726} {RNA815_9108.1}

MligTC455_30496

506

10.54

Mlig455_026882

Neo: -

Age: logFC(26M/2M)=0.358

Region-enriched R4: 2.152/0.01690

MYO6

0.961

Mlig455_026882 {REF} {Length: 5927} {TRANSSPLICED} {Pfam: Myosin head (motor domain) [PF00063.23, score=758.2]; Myosin VI cargo binding domain [PF16521.7, score=129.6]; Myosin N-terminal SH3-like domain [PF02736.21, score=30.1]} {Human: ENSG00000196586, MYO6, myosin VI, [Score=910, Expect=0.0]} {Mouse: ENSMUSG00000033577, Myo6, myosin VI, [Score=896, Expect=0.0]} {Dmel: FBgn0011225, jar, jaguar, [Score=881, Expect=0.0]} {Celegans: WBGene00004969, spe-15, [Score=775, Expect=0.0]} {Smed: dd_Smed_v6_4503_0_1, dd_Smed_v6_4503_0_1, [Score=844, Expect=0.0]} {RNA1509_1417} {RNA1310_883} {RNA815_546}

MligTC455_41302

500

10.42

Mlig455_015217

Neo: -

Age: -

Region-enriched R5: 1.184/0.00692

PHLDB1

0.951

Mlig455_015217 {REF} {Length: 4040} {Pfam: PH domain [PF00169.31, score=35.7]; Pleckstrin homology domain [PF15409.8, score=19.2]} {Human: ENSG00000019144, PHLDB1, pleckstrin homology like domain family B member 1, [RH, Score=156, Expect=4e-39]; ENSG00000144824, PHLDB2, pleckstrin homology like domain family B member 2, [RH, Score=154, Expect=5e-38]} {Mouse: ENSMUSG00000048537, Phldb1, pleckstrin homology like domain, family B, member 1, [RH, Score=157, Expect=1e-39]; ENSMUSG00000033149, Phldb2, pleckstrin homology like domain, family B, member 2, [RH, Score=152, Expect=2e-38]} {Dmel: FBgn0260748, CG5004, [RH, Score=126, Expect=3e-29]} {Smed: dd_Smed_v6_7833_0_1, dd_Smed_v6_7833_0_1, [Score=100, Expect=3e-22]} {RNA1509_10118, RNA1509_40792} {RNA1310_1799.2, RNA1509_10118, RNA1509_40792} {RNA1509_10118, RNA1509_40792, RNA815_1523.1}