Data search


search
Exact
Search

Results for MligTC455_19368

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_19368 62 1.29 Mlig455_048721

Neo: -

Age: -

Mlig455_048721 {REF} {Length: 611}

Cumulative graph for MligTC455_19368

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.989 1.291 0.39488 1.00000
RegionR2 0.666 1.291 0.33352 0.72517
RegionR3 0.815 1.291 0.33197 0.86980
RegionR4 2.141 1.291 0.08427 0.27450
RegionR5 -0.663 1.291 0.99964 1.00000
RegionR6 -1.802 1.291 0.99964 1.00000
RegionR7 -1.972 1.291 0.99968 1.00000
RegionR8 -1.175 1.291 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.769 1.291 0.48243 1.00000
RegenerationR2 1.421 1.291 0.14655 0.57847
RegenerationR3 1.229 1.291 0.35571 0.77370
RegenerationR4 0.295 1.291 0.79594 0.98499
RegenerationR5 2.488 1.291 0.05162 0.36594
RegenerationR6 3.532 1.291 0.05346 0.28982
RegenerationBL 2.8 1.291 0.15589 0.47243
RegenerationTP 2.276 1.291 0.39700 0.82715


Genes with expression patterns similar to MligTC455_19368

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_19368 62 1.29 Mlig455_048721

Neo: -

Age: -

4 - - 1.000 1.000 1.000 1.000 Mlig455_048721 {REF} {Length: 611}
2. MligTC455_53819 234 4.88 Mlig455_029142, Mlig455_032108

Neo: -

Age: -

1.817 - - 0.974 - - 0.843

Mlig455_029142 {REF} {Length: 262} {NoTransDecoderORF} {RNA1310_91707} {RNA815_47119}

Mlig455_032108 {REF} {Length: 1704} {NoTransDecoderORF} {RNA1509_22316} {RNA1310_88113} {RNA815_47119}
3. MligTC455_22294 455 9.48 Mlig455_061740

Neo: -

Age: Up-Down-Down

RNF213 0.981 - - 0.981 - - - Mlig455_061740 {REF} {Length: 17070} {TRANSSPLICED} {Pfam: AAA domain (dynein-related subfamily) [PF07728.16, score=27.1]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=24.5]; AAA ATPase domain [PF13191.8, score=22.7]; AAA domain [PF13401.8, score=20.0]} {Human: ENSG00000173821, RNF213, ring finger protein 213, [Score=1007, Expect=0.0]} {Mouse: ENSMUSG00000070327, Rnf213, ring finger protein 213, [Score=1026, Expect=0.0]} {Dmel: FBgn0053196, dpy, dumpy, [Score=63.2, Expect=8e-09]} {Celegans: WBGene00002263, lea-1, Ce-LEA; Plant Late Embryo Abundant (LEA) related, [RH, Score=55.5, Expect=1e-06]} {RNA1509_2328} {RNA1310_25.1} {RNA815_230}
4. MligTC455_13459 511 10.65 Mlig455_051578

Neo: -

Age: logFC(26M/2M)=-0.326

Region-enriched R3: 1.389/0.00361

0.974 - - 0.974 - - - Mlig455_051578 {REF} {Length: 3808} {TRANSSPLICED} {Dmel: FBgn0039113, CG10217, [RH, Score=306, Expect=8e-96]} {Smed: dd_Smed_v6_2624_0_1, dd_Smed_v6_2624_0_1, [RH, Score=568, Expect=0.0]} {RNA1509_16848, RNA1509_33422, RNA1509_53660} {RNA1310_12023.1, RNA1509_16848, RNA1509_33422} {RNA1509_16848, RNA1509_33422, RNA815_3958.1}
5. MligTC455_45802 239 4.98 Mlig455_046270, Mlig455_061548

Neo: -

Age: -

0.971 - - 0.971 - - -

Mlig455_046270 {REF} {Length: 3363}

Mlig455_061548 {REF} {Length: 982}
6. MligTC455_47701 476 9.92 Mlig455_067788

Neo: -

Age: -

PDCD6 0.97 - - 0.970 - - - Mlig455_067788 {REF} {Length: 2318} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=81.2]; EF-hand domain [PF13405.8, score=77.5]; EF hand [PF00036.34, score=68.1]; EF-hand domain pair [PF13833.8, score=62.8]; EF hand [PF13202.8, score=38.9]; EF-hand domain [PF14658.8, score=21.1]} {Human: ENSG00000249915, PDCD6, programmed cell death 6, [RH, Score=224, Expect=7e-75]} {Mouse: ENSMUSG00000021576, Pdcd6, programmed cell death 6, [RH, Score=223, Expect=1e-74]} {Dmel: FBgn0086378, Alg-2, Apoptosis-linked gene-2, [RH, Score=241, Expect=6e-82]} {Celegans: WBGene00019770, M04F3.4, [RH, Score=209, Expect=9e-70]} {Smed: dd_Smed_v6_3585_0_1, dd_Smed_v6_3585_0_1, [RH, Score=248, Expect=3e-85]} {RNA1509_8800} {RNA1310_29119.2} {RNA815_13585}
7. MligTC455_15555 155 3.23 Mlig455_013832, Mlig455_059929

Neo: -

Age: -

SIX2 0.967 - - 0.967 - - -

Mlig455_013832 {REF} {Length: 1516} {TRANSSPLICED} {Pfam: Transcriptional regulator, SIX1, N-terminal SD domain [PF16878.7, score=154.8]; Homeodomain [PF00046.31, score=49.7]; Homeobox KN domain [PF05920.13, score=43.3]} {Human: ENSG00000170577, SIX2, SIX homeobox 2, [Score=322, Expect=1e-109]; ENSG00000126778, SIX1, SIX homeobox 1, [Score=320, Expect=5e-109]} {Mouse: ENSMUSG00000024134, Six2, sine oculis-related homeobox 2, [Score=323, Expect=5e-110]; ENSMUSG00000051367, Six1, sine oculis-related homeobox 1, [Score=321, Expect=2e-109]} {Dmel: FBgn0003460, so, sine oculis, [Score=323, Expect=1e-108]} {Celegans: WBGene00000454, ceh-33, Homeobox protein ceh-33, [RH, Score=243, Expect=3e-79]} {Smed: dd_Smed_v6_9774_0_1, dd_Smed_v6_9774_0_1, [Score=328, Expect=1e-109]} {RNA1310_38333} {RNA815_34016}

Mlig455_059929 {REF} {Length: 1578} {TRANSSPLICED} {Pfam: Transcriptional regulator, SIX1, N-terminal SD domain [PF16878.7, score=154.9]; Homeodomain [PF00046.31, score=49.7]; Homeobox KN domain [PF05920.13, score=43.3]} {Human: ENSG00000170577, SIX2, SIX homeobox 2, [Score=322, Expect=1e-109]; ENSG00000126778, SIX1, SIX homeobox 1, [Score=320, Expect=4e-109]} {Mouse: ENSMUSG00000024134, Six2, sine oculis-related homeobox 2, [Score=323, Expect=6e-110]; ENSMUSG00000051367, Six1, sine oculis-related homeobox 1, [Score=320, Expect=3e-109]} {Dmel: FBgn0003460, so, sine oculis, [Score=323, Expect=1e-108]} {Celegans: WBGene00000454, ceh-33, Homeobox protein ceh-33, [RH, Score=243, Expect=3e-79]} {Smed: dd_Smed_v6_9774_0_1, dd_Smed_v6_9774_0_1, [Score=328, Expect=1e-109]} {RNA1310_38333} {RNA815_34016}
8. MligTC455_49493 514 10.71 Mlig455_024144

Neo: Int S/G2/M

Age: -

Region-enriched R4: 1.638/0.01182

COX17 0.967 - - 0.967 - - - Mlig455_024144 {REF} {Length: 1775} {TRANSSPLICED} {Pfam: Cytochrome C oxidase copper chaperone (COX17) [PF05051.15, score=73.6]} {Human: ENSG00000138495, COX17, cytochrome c oxidase copper chaperone COX17, [RH, Score=71.2, Expect=1e-17]} {Mouse: ENSMUSG00000046516, Cox17, cytochrome c oxidase assembly protein 17, copper chaperone, [RH, Score=69.7, Expect=3e-17]; ENSMUSG00000095464, Gm21987, predicted gene 21987, [RH, Score=69.7, Expect=3e-17]} {Dmel: FBgn0030610, CG9065, [RH, Score=63.9, Expect=7e-15]} {Celegans: WBGene00018240, cox-17, Cytochrome OXidase assembly protein, [RH, Score=67.8, Expect=7e-17]} {Smed: dd_Smed_v6_732_0_1, dd_Smed_v6_732_0_1, [RH, Score=66.6, Expect=2e-16]} {RNA1509_21851, RNA1509_28998, RNA1509_34104} {RNA1310_11448.1, RNA1509_28998, RNA1509_34104} {RNA1509_28998, RNA1509_34104, RNA815_34681}
9. MligTC455_00106 17 0.35 Mlig455_011662

Neo: -

Age: -

0.966 - - - - 0.966 - Mlig455_011662 {REF} {Length: 74} {NoTransDecoderORF} {RNA1509_32637} {RNA1310_15891} {RNA815_43082}
10. MligTC455_27282 473 9.86 Mlig455_018675, Mlig455_018883, Mlig455_064946

Neo: -

Age: Down-Down-Up

0.963 - - 0.963 - - -

Mlig455_018675 {REF} {Length: 2885} {NoTransDecoderORF} {RNA1509_41978} {RNA1310_26459, RNA1509_41978} {RNA1509_41978, RNA815_17486.3}

Mlig455_018883 {REF} {Length: 1366} {NoTransDecoderORF} {RNA1509_41978} {RNA1310_26459} {RNA815_43296}

Mlig455_064946 {REF} {Length: 2668} {NoTransDecoderORF} {RNA1509_41978} {RNA1310_26459} {RNA815_43296}
11. MligTC455_26270 489 10.18 Mlig455_001702, Mlig455_024185, Mlig455_049718, Mlig455_052850

Neo: -

Age: -

0.962 - - - - - 0.962

Mlig455_001702 {REF} {Length: 948} {RNA1310_34488} {RNA815_20734.1}

Mlig455_024185 {REF} {Length: 352} {RNA1509_22707} {RNA1310_34488} {RNA815_20734.1}

Mlig455_049718 {REF} {Length: 3736} {RNA1509_44743} {RNA1310_5450.1} {RNA815_7078}

Mlig455_052850 {REF} {Length: 2339} {RNA1509_33210} {RNA1310_34118.1} {RNA815_20734.1}
12. MligTC455_28272 145 3.01 Mlig455_061053

Neo: -

Age: Up-Down-Down

0.962 - - - - - 0.962 Mlig455_061053 {REF} {Length: 4218} {tRNA: Val(CAC),pseudo, score=29.0} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}
13. MligTC455_51074 585 12.2 Mlig455_054379, Mlig455_054401

Neo: -

Age: -

0.961 - - 0.961 - - -

Mlig455_054379 {REF} {Length: 2291} {RNA1310_46059} {RNA815_34780}

Mlig455_054401 {REF} {Length: 764} {RNA1310_46059} {RNA815_59068}
14. MligTC455_06989 68 1.42 Mlig455_026846

Neo: -

Age: -

0.96 - - - - - 0.960 Mlig455_026846 {REF} {Length: 573} {NoTransDecoderORF} {RNA1509_59553} {RNA1310_127391}
15. MligTC455_06227 228 4.75 Mlig455_036666, Mlig455_036679

Neo: -

Age: -

0.959 - - - - 0.959 -

Mlig455_036666 {REF} {Length: 780} {RNA1310_112949}

Mlig455_036679 {REF} {Length: 4100} {RNA1310_79588}
16. MligTC455_35701 66 1.37 Mlig455_010067, Mlig455_063254, Mlig455_063279

Neo: -

Age: Up-Down-Down

Region-enriched R2: 4.716/0.02468

0.958 - - - - 0.958 -

Mlig455_010067 {REF} {Length: 2624} {Pfam: Polycystin cation channel [PF08016.14, score=46.7]} {RNA1310_62521}

Mlig455_063254 {REF} {Length: 2738} {Pfam: Polycystin cation channel [PF08016.14, score=43.3]; Lipopolysaccharide assembly protein A domain [PF06305.13, score=18.4]} {RNA1509_7418} {RNA1310_62521} {RNA815_3659}

Mlig455_063279 {REF} {Length: 2677} {Pfam: Polycystin cation channel [PF08016.14, score=46.0]} {RNA1310_62521}
17. MligTC455_36074 372 7.74 Mlig455_010283

Neo: -

Age: -

Region-enriched R3: 1.594/0.02686

ACE 0.958 - - 0.958 - - - Mlig455_010283 {REF} {Length: 2915} {Pfam: Angiotensin-converting enzyme [PF01401.20, score=556.6]} {Human: ENSG00000159640, ACE, angiotensin I converting enzyme, [Score=410, Expect=6e-134]; ENSG00000264813, AC113554.1, novel transcript, [Score=410, Expect=9e-134]} {Mouse: ENSMUSG00000020681, Ace, angiotensin I converting enzyme (peptidyl-dipeptidase A) 1, [Score=428, Expect=6e-141]} {Dmel: FBgn0012037, Ance, Angiotensin converting enzyme, [Score=360, Expect=3e-116]} {Celegans: WBGene00000039, acn-1, Inactive angiotensin-converting enzyme-related protein, [Score=154, Expect=6e-39]} {Smed: dd_Smed_v6_6160_0_1, dd_Smed_v6_6160_0_1, [RH, Score=441, Expect=1e-147]} {RNA1509_25217, RNA1509_36855} {RNA1310_6815, RNA1509_25217, RNA1509_36855} {RNA1509_25217, RNA1509_36855, RNA815_11444}
18. MligTC455_43970 595 12.39 Mlig455_055475

Neo: -

Age: -

CNBP 0.958 - - - - 0.958 - Mlig455_055475 {REF} {Length: 2082} {TRANSSPLICED} {Pfam: Zinc knuckle [PF00098.25, score=152.7]; Zinc knuckle [PF14392.8, score=40.9]; GAG-polyprotein viral zinc-finger [PF14787.8, score=31.5]; Zinc knuckle [PF13917.8, score=22.9]} {Human: ENSG00000169714, CNBP, CCHC-type zinc finger nucleic acid binding protein, [RH, Score=91.7, Expect=9e-23]} {Mouse: ENSMUSG00000030057, Cnbp, cellular nucleic acid binding protein, [RH, Score=91.7, Expect=6e-23]} {Dmel: FBgn0034802, CNBP, CCHC-type zinc finger nucleic acid binding protein, [RH, Score=80.5, Expect=7e-19]} {Celegans: WBGene00019537, K08D12.3, [Score=62.0, Expect=3e-12]} {Smed: dd_Smed_v6_947_0_1, dd_Smed_v6_947_0_1, [RH, Score=115, Expect=2e-32]} {RNA1509_36940, RNA1509_42112} {RNA1310_29194, RNA1509_36940, RNA1509_42112} {RNA1509_36940, RNA1509_42112, RNA815_13634}
19. MligTC455_30189 134 2.78 Mlig455_047628

Neo: -

Age: -

0.955 - - 0.955 - - - Mlig455_047628 {REF} {Length: 333} {NoTransDecoderORF} {RNA1310_9005} {RNA815_51843}
20. MligTC455_46147 225 4.68 Mlig455_037569

Neo: -

Age: Up-Down-Down

PDS5A 0.955 - - 0.955 - - - Mlig455_037569 {REF} {Length: 7928} {TRANSSPLICED} {Human: ENSG00000121892, PDS5A, PDS5 cohesin associated factor A, [Score=329, Expect=6e-93]; ENSG00000083642, PDS5B, PDS5 cohesin associated factor B, [Score=326, Expect=2e-91]} {Mouse: ENSMUSG00000034021, Pds5b, PDS5 cohesin associated factor B, [Score=330, Expect=3e-93]; ENSMUSG00000029202, Pds5a, PDS5 cohesin associated factor A, [Score=329, Expect=3e-93]} {Dmel: FBgn0260012, pds5, precocious dissociation of sisters 5, [Score=245, Expect=5e-66]} {Smed: dd_Smed_v6_6701_1_1, dd_Smed_v6_6701_1_1, [RH, Score=214, Expect=1e-56]} {RNA1509_7371} {RNA1310_1423.1} {RNA815_501}
21. MligTC455_47187 163 3.4 Mlig455_065053

Neo: -

Age: -

Region-enriched R2: 3.157/0.01854

0.954 - - 0.954 - - - Mlig455_065053 {REF} {Length: 3229} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=45.0]} {Smed: dd_Smed_v6_21592_0_1, dd_Smed_v6_21592_0_1, [RH, Score=63.2, Expect=8e-11]} {RNA1509_28827} {RNA1310_43256} {RNA815_16925}
22. MligTC455_33433 512 10.66 Mlig455_007084, Mlig455_015087, Mlig455_027876, Mlig455_033676, Mlig455_041557, Mlig455_044268, Mlig455_048656, Mlig455_058403, Mlig455_063235, Mlig455_068131

Neo: -

Age: Up-Down-Down

0.952 - - 0.952 - - -

Mlig455_007084 {REF} {Length: 2774} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=33.2]} {RNA1509_13203} {RNA1310_267.2} {RNA815_381.1}

Mlig455_015087 {REF} {Length: 2505} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=34.7]} {RNA1509_13203} {RNA1310_267.2} {RNA815_381.1}

Mlig455_027876 {REF} {Length: 776} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=34.7]} {RNA1509_13203} {RNA1310_267.1} {RNA815_381.1}

Mlig455_033676 {REF} {Length: 917} {RNA1509_52826} {RNA1310_267.2} {RNA815_381.1}

Mlig455_041557 {REF} {Length: 916} {RNA1509_13203} {RNA1310_267.2} {RNA815_381.1}

Mlig455_044268 {REF} {Length: 928} {TRANSSPLICED} {RNA1509_13203} {RNA1310_267.2} {RNA815_381.1}

Mlig455_048656 {REF} {Length: 773} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=34.7]} {RNA1509_52826} {RNA1310_267.2} {RNA815_381.1}

Mlig455_058403 {REF} {Length: 776} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=34.7]} {RNA1509_13203} {RNA1310_267.1} {RNA815_381.1}

Mlig455_063235 {REF} {Length: 1007} {TRANSSPLICED} {RNA1509_13203} {RNA1310_267.2} {RNA815_381.1}

Mlig455_068131 {REF} {Length: 1340} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=35.4]} {RNA1509_52826} {RNA1310_267.2} {RNA815_381.1}
23. MligTC455_13800 174 3.62 Mlig455_025213, Mlig455_025646

Neo: -

Age: -

BICDL1 0.951 - - 0.951 - - -

Mlig455_025213 {REF} {Length: 3644} {TRANSSPLICED} {Pfam: Intermediate filament protein [PF00038.23, score=18.6]} {Human: ENSG00000135127, BICDL1, BICD family like cargo adaptor 1, [RH, Score=95.9, Expect=4e-20]} {Mouse: ENSMUSG00000041609, Bicdl1, BICD family like cargo adaptor 1, [RH, Score=95.5, Expect=4e-20]} {Dmel: FBgn0052137, CG32137, [RH, Score=100, Expect=1e-21]} {Smed: dd_Smed_v6_7219_0_1, dd_Smed_v6_7219_0_1, [RH, Score=129, Expect=1e-31]} {RNA1509_34033} {RNA1310_18300.1, RNA1509_34033} {RNA1509_34033, RNA815_35699}

Mlig455_025646 {REF} {Length: 3450} {Pfam: Intermediate filament protein [PF00038.23, score=18.6]} {Human: ENSG00000135127, BICDL1, BICD family like cargo adaptor 1, [RH, Score=95.9, Expect=5e-20]} {Mouse: ENSMUSG00000041609, Bicdl1, BICD family like cargo adaptor 1, [RH, Score=95.5, Expect=5e-20]} {Dmel: FBgn0052137, CG32137, [RH, Score=99.0, Expect=3e-21]} {Smed: dd_Smed_v6_7219_0_1, dd_Smed_v6_7219_0_1, [RH, Score=129, Expect=1e-31]} {RNA1509_34033} {RNA1310_18300.1} {RNA815_35699}
24. MligTC455_28189 1402 29.22 Mlig455_021454, Mlig455_029274, Mlig455_043974

Neo: -

Age: Down-Up-Down

0.95 - - 0.950 - - -

Mlig455_021454 {REF} {Length: 2869} {TRANSSPLICED} {RNA1509_51272} {RNA1310_143.1} {RNA815_104.1}

Mlig455_029274 {REF} {Length: 3704} {RNA1509_51272} {RNA1310_143.1} {RNA815_104.1}

Mlig455_043974 {REF} {Length: 5826} {RNA1509_16132} {RNA1310_143.1} {RNA815_104.1}
25. MligTC455_35752 56 1.18 Mlig455_056840

Neo: -

Age: -

Region-enriched R4: 4.574/0.02705

MFSD6 0.95 - - - 0.950 - - Mlig455_056840 {REF} {Length: 4246} {Pfam: MFS_1 like family [PF12832.9, score=290.4]; Major Facilitator Superfamily [PF07690.18, score=66.5]; Nucleoside H+ symporter [PF03825.18, score=37.1]; LacY proton/sugar symporter [PF01306.21, score=20.1]; MFS/sugar transport protein [PF13347.8, score=19.7]} {Human: ENSG00000151690, MFSD6, major facilitator superfamily domain containing 6, [RH, Score=263, Expect=2e-76]} {Mouse: ENSMUSG00000041439, Mfsd6, major facilitator superfamily domain containing 6, [RH, Score=264, Expect=7e-79]} {Dmel: FBgn0033958, jef, jet fuel, [RH, Score=408, Expect=9e-132]} {Celegans: WBGene00020051, R13A5.9, [RH, Score=283, Expect=1e-85]} {Smed: dd_Smed_v6_10640_0_1, dd_Smed_v6_10640_0_1, [RH, Score=522, Expect=8e-178]} {RNA1509_27602} {RNA1310_8507} {RNA815_3634}
26. MligTC455_48539 332 6.92 Mlig455_064489

Neo: -

Age: logFC(26M/2M)=-0.444

0.95 - - - - 0.950 - Mlig455_064489 {REF} {Length: 1365} {TRANSSPLICED} {Celegans: WBGene00016619, C43H6.6, [Score=53.9, Expect=1e-07]} {RNA1509_12795} {RNA1310_25196} {RNA815_9417}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA