Data search
Results for MligTC455_19374
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_19374 | 348 | 7.25 | Mlig455_040538 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.449 Region-enriched R5: 1.708/0.00028 |
FTH1 | Mlig455_040538 {REF} {Length: 1772} {TRANSSPLICED} {Pfam: Ferritin-like domain [PF00210.26, score=65.9]} {Human: ENSG00000167996, FTH1, ferritin heavy chain 1, [Score=103, Expect=6e-26]; ENSG00000181867, FTMT, ferritin mitochondrial, [Score=98.6, Expect=1e-23]} {Mouse: ENSMUSG00000024510, Ftmt, ferritin mitochondrial, [Score=102, Expect=4e-25]; ENSMUSG00000024661, Fth1, ferritin heavy polypeptide 1, [Score=100, Expect=6e-25]} {Dmel: FBgn0030449, Fer3HCH, Ferritin 3 heavy chain homologue, [Score=96.3, Expect=1e-23]} {Celegans: WBGene00001501, ftn-2, Ferritin, [Score=112, Expect=9e-30]} {Smed: dd_Smed_v6_3974_0_1, dd_Smed_v6_3974_0_1, [Score=115, Expect=3e-31]} {RNA1509_11155} {RNA1310_7838.2} {RNA815_11192} |
Cumulative graph for MligTC455_19374
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.19 | 3.341 | 0.90429 | 1.00000 | |
| RegionR2 | -0.596 | 3.341 | 0.36218 | 0.75695 | |
| RegionR3 | -0.9 | 3.341 | 0.12461 | 0.60818 | |
| RegionR4 | 1.125 | 3.341 | 0.02943 | 0.13407 | |
| RegionR5 | 1.708 | 3.341 | 0.00001 | 0.00028 | |
| RegionR6 | 0.041 | 3.341 | 0.93529 | 1.00000 | |
| RegionR7 | -0.231 | 3.341 | 0.77109 | 1.00000 | |
| RegionR8 | -0.956 | 3.341 | 0.38469 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.778 | 3.341 | 0.26698 | 0.97039 | |
| RegenerationR2 | 1.163 | 3.341 | 0.01472 | 0.19833 | |
| RegenerationR3 | 1.466 | 3.341 | 0.00959 | 0.17916 | |
| RegenerationR4 | 0.003 | 3.341 | 0.99644 | 1.00000 | |
| RegenerationR5 | 0.444 | 3.341 | 0.26306 | 0.69464 | |
| RegenerationR6 | 0.603 | 3.341 | 0.26929 | 0.61963 | |
| RegenerationBL | 1.636 | 3.341 | 0.01084 | 0.10533 | |
| RegenerationTP | 1.43 | 3.341 | 0.07049 | 0.42587 |
Genes with expression patterns similar to MligTC455_19374
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_19374 | 348 | 7.25 | Mlig455_040538 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.449 Region-enriched R5: 1.708/0.00028 |
FTH1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_040538 {REF} {Length: 1772} {TRANSSPLICED} {Pfam: Ferritin-like domain [PF00210.26, score=65.9]} {Human: ENSG00000167996, FTH1, ferritin heavy chain 1, [Score=103, Expect=6e-26]; ENSG00000181867, FTMT, ferritin mitochondrial, [Score=98.6, Expect=1e-23]} {Mouse: ENSMUSG00000024510, Ftmt, ferritin mitochondrial, [Score=102, Expect=4e-25]; ENSMUSG00000024661, Fth1, ferritin heavy polypeptide 1, [Score=100, Expect=6e-25]} {Dmel: FBgn0030449, Fer3HCH, Ferritin 3 heavy chain homologue, [Score=96.3, Expect=1e-23]} {Celegans: WBGene00001501, ftn-2, Ferritin, [Score=112, Expect=9e-30]} {Smed: dd_Smed_v6_3974_0_1, dd_Smed_v6_3974_0_1, [Score=115, Expect=3e-31]} {RNA1509_11155} {RNA1310_7838.2} {RNA815_11192} |
| 2. | MligTC455_24379 | 516 | 10.76 | Mlig455_009809 | Neo: - Age: Down-Up-Down Region-enriched R5: 2.273/0.00014 |
2.482 | 0.741 | - | - | - | 0.763 | 0.978 | Mlig455_009809 {REF} {Length: 2215} {TRANSSPLICED} {RNA1509_12618} {RNA1310_12491.1, RNA1509_12618} {RNA1509_12618, RNA815_3984} | |
| 3. | MligTC455_15067 | 125 | 2.6 | Mlig455_054151 | Neo: Irradiation Age: Up-Up-Down Region-enriched R5: 3.089/0.00007 |
1.733 | - | - | - | - | 0.775 | 0.958 | Mlig455_054151 {REF} {Length: 3744} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=37.5]; C2H2-type zinc finger [PF13894.8, score=22.6]} {Mouse: ENSMUSG00000036898, Zfp157, zinc finger protein 157, [Score=52.8, Expect=4e-07]} {RNA1509_37020, RNA1509_58735} {RNA1310_23296, RNA1509_58735} {RNA1509_58735, RNA815_10259} | |
| 4. | MligTC455_17781 | 269 | 5.61 | Mlig455_004662, Mlig455_004729 | Neo: - Age: - |
1.699 | - | 0.736 | - | - | - | 0.963 | Mlig455_004662 {REF} {Length: 5019} {RNA1509_56284, RNA1509_56551} {RNA1310_47027, RNA1509_56284, RNA1509_56551} {RNA1509_56284, RNA1509_56551, RNA815_22885} Mlig455_004729 {REF} {Length: 5250} {RNA1509_60096} {RNA1310_56110, RNA1509_60096} {RNA1509_60096, RNA815_22885} |
|
| 5. | MligTC455_38939 | 1398 | 29.12 | Mlig455_016045 | Neo: - Age: - Region-enriched R5: 1.125/0.00005 |
USP22 | 1.691 | 0.732 | - | - | - | - | 0.959 | Mlig455_016045 {REF} {Length: 4994} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=198.4]; Zn-finger in ubiquitin-hydrolases and other protein [PF02148.21, score=41.6]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=37.7]; Ubiquitin-specific peptidase-like, SUMO isopeptidase [PF15499.8, score=19.1]} {Human: ENSG00000124422, USP22, ubiquitin specific peptidase 22, [RH, Score=417, Expect=3e-141]} {Mouse: ENSMUSG00000042506, Usp22, ubiquitin specific peptidase 22, [RH, Score=414, Expect=3e-140]} {Dmel: FBgn0013717, not, non-stop, [RH, Score=371, Expect=5e-124]} {Celegans: WBGene00013506, usp-3, Ubiquitinyl hydrolase 1, [Score=113, Expect=1e-26]} {Smed: dd_Smed_v6_10110_0_2, dd_Smed_v6_10110_0_2, [RH, Score=249, Expect=8e-77]} {RNA1509_10700, RNA1509_19534, RNA1509_20115, RNA1509_25879, RNA1509_34023, RNA1509_45467, RNA1509_4573} {RNA1310_14900, RNA1509_10700, RNA1509_19534, RNA1509_20115, RNA1509_25879, RNA1509_34023, RNA1509_45467, RNA1509_4573} {RNA1509_10700, RNA1509_19534, RNA1509_20115, RNA1509_25879, RNA1509_34023, RNA1509_45467, RNA1509_4573, RNA815_5760.1} |
| 6. | MligTC455_30047 | 531 | 11.06 | Mlig455_008702, Mlig455_033988 | Neo: - Age: - |
WDR36 | 1.669 | 0.719 | - | - | - | - | 0.950 | Mlig455_008702 {REF} {Length: 3334} {Pfam: Utp21 specific WD40 associated putative domain [PF04192.14, score=100.2]} {Human: ENSG00000134987, WDR36, WD repeat domain 36, [Score=85.5, Expect=1e-16]} {Mouse: ENSMUSG00000038299, Wdr36, WD repeat domain 36, [Score=82.8, Expect=4e-16]} {Dmel: FBgn0038146, CG9799, [Score=85.1, Expect=6e-17]} {Celegans: WBGene00012887, Y45F10D.7, [Score=65.5, Expect=7e-11]} {Smed: dd_Smed_v6_6943_0_1, dd_Smed_v6_6943_0_1, [Score=80.5, Expect=9e-16]} {RNA1509_51039} {RNA1310_5841.1} {RNA815_18579} Mlig455_033988 {REF} {Length: 3505} {TRANSSPLICED} {Pfam: Utp21 specific WD40 associated putative domain [PF04192.14, score=108.8]; WD domain, G-beta repeat [PF00400.34, score=34.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=30.4]; Dip2/Utp12 Family [PF04003.14, score=19.0]} {Human: ENSG00000134987, WDR36, WD repeat domain 36, [RH, Score=424, Expect=4e-134]} {Mouse: ENSMUSG00000038299, Wdr36, WD repeat domain 36, [RH, Score=410, Expect=4e-129]} {Dmel: FBgn0038146, CG9799, [RH, Score=357, Expect=6e-109]} {Celegans: WBGene00012887, Y45F10D.7, [RH, Score=269, Expect=7e-77]} {Smed: dd_Smed_v6_6943_0_1, dd_Smed_v6_6943_0_1, [RH, Score=265, Expect=4e-75]} {RNA1509_19850} {RNA1310_5841.1} {RNA815_10013} |
| 7. | MligTC455_44887 | 259 | 5.39 | Mlig455_036907 | Neo: Int S/G2/M Age: - Region-enriched R5: 2.542/0.00111 |
0.979 | - | - | - | - | - | 0.979 | Mlig455_036907 {REF} {Length: 3437} {TRANSSPLICED} {RNA1509_19251, RNA1509_43115, RNA1509_55744} {RNA1310_5979.2, RNA1509_43115, RNA1509_55744} {RNA1509_43115, RNA1509_55744, RNA815_3904} | |
| 8. | MligTC455_29115 | 1506 | 31.37 | Mlig455_040502, Mlig455_040519 | Neo: Irradiation Age: logFC(26M/2M)=0.365 Region-specific R5: 3.179 Region-enriched R5: 2.708/0.00000 |
ZNF608, ZNF609 | 0.972 | - | - | - | - | - | 0.972 | Mlig455_040502 {REF} {Length: 4871} {Human: ENSG00000180357, ZNF609, zinc finger protein 609, [RH, Score=120, Expect=2e-27]; ENSG00000168916, ZNF608, zinc finger protein 608, [RH, Score=118, Expect=1e-26]} {Mouse: ENSMUSG00000052713, Zfp608, zinc finger protein 608, [RH, Score=119, Expect=4e-27]} {Dmel: FBgn0285917, sbb, scribbler, [RH, Score=115, Expect=7e-26]} {Smed: dd_Smed_v6_9549_0_1, dd_Smed_v6_9549_0_1, [Score=102, Expect=4e-23]} {RNA1509_6603} {RNA1310_4038.2} {RNA815_6448} Mlig455_040519 {REF} {Length: 3263} {Human: ENSG00000168916, ZNF608, zinc finger protein 608, [RH, Score=112, Expect=4e-25]; ENSG00000180357, ZNF609, zinc finger protein 609, [RH, Score=110, Expect=3e-24]} {Mouse: ENSMUSG00000052713, Zfp608, zinc finger protein 608, [RH, Score=117, Expect=1e-26]} {Dmel: FBgn0285917, sbb, scribbler, [RH, Score=114, Expect=1e-25]} {Smed: dd_Smed_v6_9549_0_1, dd_Smed_v6_9549_0_1, [Score=101, Expect=3e-23]} {RNA1509_6603} {RNA1310_4038.2} {RNA815_6448} |
| 9. | MligTC455_40748 | 290 | 6.04 | Mlig455_033303 | Neo: Int S/G2/M Age: - |
0.963 | - | - | - | - | - | 0.963 | Mlig455_033303 {REF} {Length: 1959} {RNA1509_9055} {RNA1310_20842, RNA1509_9055} {RNA1509_9055, RNA815_9420} | |
| 10. | MligTC455_26321 | 1422 | 29.62 | Mlig455_045203 | Neo: - Age: - |
EIF3G | 0.957 | - | - | - | - | - | 0.957 | Mlig455_045203 {REF} {Length: 1257} {TRANSSPLICED} {Pfam: Eukaryotic translation initiation factor 3 subunit G [PF12353.10, score=107.1]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=67.0]} {Human: ENSG00000130811, EIF3G, eukaryotic translation initiation factor 3 subunit G, [RH, Score=230, Expect=1e-73]} {Mouse: ENSMUSG00000070319, Eif3g, eukaryotic translation initiation factor 3, subunit G, [RH, Score=229, Expect=2e-73]} {Dmel: FBgn0029629, eIF3g1, eukaryotic translation initiation factor 3 subunit g1, [RH, Score=165, Expect=3e-49]} {Celegans: WBGene00001230, eif-3.G, Eukaryotic translation initiation factor 3 subunit G, [Score=137, Expect=9e-39]} {Smed: dd_Smed_v6_15937_0_1, dd_Smed_v6_15937_0_1, [RH, Score=176, Expect=9e-54]} {RNA1509_41257} {RNA1310_22196} {RNA815_4984} |
Berezikov Lab - 2020-2021 © ERIBA