Data search


search
Exact
Search

Results for MligTC455_19392

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_19392 158 3.30 Mlig455_040402

Neo: -

Age: -

ATG7 Mlig455_040402 {REF} {Length: 3065} {TRANSSPLICED} {Pfam: Ubiquitin-like modifier-activating enzyme ATG7 N-terminus [PF16420.7, score=239.5]; ThiF family [PF00899.23, score=146.1]} {Human: ENSG00000197548, ATG7, autophagy related 7, [RH, Score=560, Expect=0.0]} {Mouse: ENSMUSG00000030314, Atg7, autophagy related 7, [RH, Score=558, Expect=0.0]} {Dmel: FBgn0034366, Atg7, Autophagy-related 7, [RH, Score=439, Expect=2e-145]} {Celegans: WBGene00010882, atg-7, AuTophaGy (Yeast Atg homolog), [RH, Score=449, Expect=1e-149]} {Smed: dd_Smed_v6_5083_0_1, dd_Smed_v6_5083_0_1, [RH, Score=473, Expect=1e-158]} {RNA1509_36675} {RNA1310_10886, RNA1509_36675} {RNA1509_36675, RNA815_14332}

Cumulative graph for MligTC455_19392

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.983 2.486 0.17892 0.80664
RegionR2 1.903 2.486 0.09726 0.38281
RegionR3 0.428 2.486 0.66334 1.00000
RegionR4 0.599 2.486 0.58761 0.90302
RegionR5 1.887 2.486 0.01859 0.09196
RegionR6 0.577 2.486 0.58146 1.00000
RegionR7 -1.087 2.486 0.99071 1.00000
RegionR8 1.676 2.486 0.20101 0.79881

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.576 2.486 0.99983 1.00000
RegenerationR2 -0.042 2.486 0.94962 1.00000
RegenerationR3 0.74 2.486 0.40531 0.80603
RegenerationR4 0.681 2.486 0.42783 0.82947
RegenerationR5 -0.077 2.486 0.92672 1.00000
RegenerationR6 0.883 2.486 0.32124 0.66787
RegenerationBL 1.449 2.486 0.15553 0.47202
RegenerationTP 1.702 2.486 0.13127 0.54483


Genes with expression patterns similar to MligTC455_19392

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_19392 158 3.3 Mlig455_040402

Neo: -

Age: -

ATG7 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_040402 {REF} {Length: 3065} {TRANSSPLICED} {Pfam: Ubiquitin-like modifier-activating enzyme ATG7 N-terminus [PF16420.7, score=239.5]; ThiF family [PF00899.23, score=146.1]} {Human: ENSG00000197548, ATG7, autophagy related 7, [RH, Score=560, Expect=0.0]} {Mouse: ENSMUSG00000030314, Atg7, autophagy related 7, [RH, Score=558, Expect=0.0]} {Dmel: FBgn0034366, Atg7, Autophagy-related 7, [RH, Score=439, Expect=2e-145]} {Celegans: WBGene00010882, atg-7, AuTophaGy (Yeast Atg homolog), [RH, Score=449, Expect=1e-149]} {Smed: dd_Smed_v6_5083_0_1, dd_Smed_v6_5083_0_1, [RH, Score=473, Expect=1e-158]} {RNA1509_36675} {RNA1310_10886, RNA1509_36675} {RNA1509_36675, RNA815_14332}
2. MligTC455_49433 75 1.57 Mlig455_069341

Neo: -

Age: logFC(26M/2M)=0.405

ZDHHC3 1.729 - - - - 0.950 0.779 Mlig455_069341 {REF} {Length: 3693} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=116.6]} {Human: ENSG00000280674, ZDHHC3, zinc finger DHHC-type containing 3, [Score=282, Expect=2e-93]; ENSG00000163812, ZDHHC3, zinc finger DHHC-type containing 3, [Score=282, Expect=2e-93]} {Mouse: ENSMUSG00000025786, Zdhhc3, zinc finger, DHHC domain containing 3, [Score=281, Expect=2e-93]} {Dmel: FBgn0034057, CG8314, [Score=278, Expect=2e-92]} {Celegans: WBGene00018009, dhhc-3, Palmitoyltransferase, [Score=205, Expect=2e-64]} {Smed: dd_Smed_v6_4085_0_1, dd_Smed_v6_4085_0_1, [Score=276, Expect=2e-90]} {RNA1509_32808} {RNA1310_19057} {RNA815_8601}
3. MligTC455_23408 388 8.08 Mlig455_000840, Mlig455_057151

Neo: -

Age: -

Region-enriched R5: 2.131/0.03455

SCARB2 0.962 0.962 - - - - -

Mlig455_000840 {REF} {Length: 2720} {TRANSSPLICED} {Pfam: CD36 family [PF01130.23, score=422.2]} {Human: ENSG00000138760, SCARB2, scavenger receptor class B member 2, [Score=266, Expect=7e-84]; ENSG00000135218, CD36, CD36 molecule, [Score=257, Expect=3e-80]} {Mouse: ENSMUSG00000029426, Scarb2, scavenger receptor class B, member 2, [Score=271, Expect=2e-85]; ENSMUSG00000002944, Cd36, CD36 molecule, [Score=261, Expect=4e-82]} {Dmel: FBgn0010435, emp, epithelial membrane protein, [Score=215, Expect=5e-64]} {Celegans: WBGene00013039, scav-3, SCAVenger receptor (CD36 family) related, [RH, Score=178, Expect=5e-50]} {Smed: dd_Smed_v6_2304_0_1, dd_Smed_v6_2304_0_1, [RH, Score=358, Expect=1e-119]} {RNA1509_18352, RNA1509_30658, RNA1509_48645} {RNA1310_12079.2, RNA1509_18352, RNA1509_30658, RNA1509_48645} {RNA1509_18352, RNA1509_30658, RNA1509_48645, RNA815_4787.1}

Mlig455_057151 {REF} {Length: 2642} {TRANSSPLICED} {Pfam: CD36 family [PF01130.23, score=421.5]} {Human: ENSG00000138760, SCARB2, scavenger receptor class B member 2, [Score=265, Expect=4e-83]; ENSG00000135218, CD36, CD36 molecule, [Score=256, Expect=5e-80]} {Mouse: ENSMUSG00000029426, Scarb2, scavenger receptor class B, member 2, [Score=269, Expect=6e-85]; ENSMUSG00000002944, Cd36, CD36 molecule, [Score=261, Expect=9e-82]} {Dmel: FBgn0010435, emp, epithelial membrane protein, [Score=216, Expect=1e-64]} {Celegans: WBGene00013039, scav-3, SCAVenger receptor (CD36 family) related, [RH, Score=177, Expect=9e-50]} {Smed: dd_Smed_v6_2304_0_1, dd_Smed_v6_2304_0_1, [RH, Score=358, Expect=1e-119]} {RNA1509_18352, RNA1509_49221} {RNA1310_12079.2, RNA1509_49221} {RNA1509_49221, RNA815_4787.1}
4. MligTC455_09366 315 6.57 Mlig455_004649

Neo: -

Age: Down-Down-Up

0.961 - - - - - 0.961 Mlig455_004649 {REF} {Length: 2502} {Pfam: Ring finger domain [PF13639.8, score=34.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=26.5]; RING-type zinc-finger [PF13445.8, score=25.6]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=24.0]} {RNA1509_34007} {RNA1310_15024} {RNA815_7070}
5. MligTC455_21419 43 0.9 Mlig455_003921

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.460

GIMAP4 0.954 - - - - 0.954 - Mlig455_003921 {REF} {Length: 1606} {Pfam: AIG1 family [PF04548.18, score=120.0]; 50S ribosome-binding GTPase [PF01926.25, score=29.5]; Septin [PF00735.20, score=28.4]; RsgA GTPase [PF03193.18, score=24.6]} {Human: ENSG00000133574, GIMAP4, GTPase, IMAP family member 4, [Score=77.8, Expect=1e-15]; ENSG00000281887, GIMAP1-GIMAP5, GIMAP1-GIMAP5 readthrough, [Score=75.1, Expect=2e-14]} {Mouse: ENSMUSG00000043931, Gimap7, GTPase, IMAP family member 7, [Score=77.4, Expect=6e-16]} {RNA1509_19903} {RNA1310_21201.1} {RNA815_9568.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA