TomoSeq data search

Data search

Results for MligTC455_19414

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_19414	944	19.66	Mlig455_009508, Mlig455_070914	Neo: - Age: Down-Up-Up	MEIS3	Mlig455_009508 {REF} {Length: 2771} {Pfam: N-terminal of Homeobox Meis and PKNOX1 [PF16493.7, score=118.7]; Homeobox KN domain [PF05920.13, score=67.7]; Homeodomain [PF00046.31, score=31.3]} {Human: ENSG00000105419, MEIS3, Meis homeobox 3, [RH, Score=273, Expect=6e-87]} {Mouse: ENSMUSG00000041420, Meis3, Meis homeobox 3, [RH, Score=272, Expect=9e-87]} {Dmel: FBgn0001235, hth, homothorax, [Score=249, Expect=5e-77]} {Celegans: WBGene00006796, unc-62, Homeobox protein unc-62, [Score=131, Expect=5e-33]} {Smed: dd_Smed_v6_8606_0_1, dd_Smed_v6_8606_0_1, [Score=171, Expect=4e-46]} {RNA1509_35777} {RNA1310_12463.1} {RNA815_15009} Mlig455_070914 {REF} {Length: 2786} {Pfam: N-terminal of Homeobox Meis and PKNOX1 [PF16493.7, score=118.6]; Homeobox KN domain [PF05920.13, score=67.6]; Homeodomain [PF00046.31, score=31.2]} {Human: ENSG00000105419, MEIS3, Meis homeobox 3, [RH, Score=271, Expect=4e-86]} {Mouse: ENSMUSG00000041420, Meis3, Meis homeobox 3, [RH, Score=271, Expect=3e-86]} {Dmel: FBgn0001235, hth, homothorax, [Score=249, Expect=5e-77]} {Celegans: WBGene00006796, unc-62, Homeobox protein unc-62, [Score=131, Expect=5e-33]} {Smed: dd_Smed_v6_8606_0_1, dd_Smed_v6_8606_0_1, [Score=169, Expect=2e-45]} {RNA1509_35777} {RNA1310_12463.1, RNA1509_35777} {RNA1509_35777, RNA815_15009}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_19414

944

19.66

Mlig455_009508, Mlig455_070914

Neo: -

Age: Down-Up-Up

MEIS3

Mlig455_009508 {REF} {Length: 2771} {Pfam: N-terminal of Homeobox Meis and PKNOX1 [PF16493.7, score=118.7]; Homeobox KN domain [PF05920.13, score=67.7]; Homeodomain [PF00046.31, score=31.3]} {Human: ENSG00000105419, MEIS3, Meis homeobox 3, [RH, Score=273, Expect=6e-87]} {Mouse: ENSMUSG00000041420, Meis3, Meis homeobox 3, [RH, Score=272, Expect=9e-87]} {Dmel: FBgn0001235, hth, homothorax, [Score=249, Expect=5e-77]} {Celegans: WBGene00006796, unc-62, Homeobox protein unc-62, [Score=131, Expect=5e-33]} {Smed: dd_Smed_v6_8606_0_1, dd_Smed_v6_8606_0_1, [Score=171, Expect=4e-46]} {RNA1509_35777} {RNA1310_12463.1} {RNA815_15009}

Mlig455_070914 {REF} {Length: 2786} {Pfam: N-terminal of Homeobox Meis and PKNOX1 [PF16493.7, score=118.6]; Homeobox KN domain [PF05920.13, score=67.6]; Homeodomain [PF00046.31, score=31.2]} {Human: ENSG00000105419, MEIS3, Meis homeobox 3, [RH, Score=271, Expect=4e-86]} {Mouse: ENSMUSG00000041420, Meis3, Meis homeobox 3, [RH, Score=271, Expect=3e-86]} {Dmel: FBgn0001235, hth, homothorax, [Score=249, Expect=5e-77]} {Celegans: WBGene00006796, unc-62, Homeobox protein unc-62, [Score=131, Expect=5e-33]} {Smed: dd_Smed_v6_8606_0_1, dd_Smed_v6_8606_0_1, [Score=169, Expect=2e-45]} {RNA1509_35777} {RNA1310_12463.1, RNA1509_35777} {RNA1509_35777, RNA815_15009}

Cumulative graph for MligTC455_19414

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.257	4.578	0.82250	1.00000
RegionR2	-0.061	4.578	0.90944	1.00000
RegionR3	1.102	4.578	0.00830	0.13496
RegionR4	0.211	4.578	0.69177	0.98294
RegionR5	-0.585	4.578	0.18993	0.47326
RegionR6	-0.393	4.578	0.40313	0.97402
RegionR7	-0.472	4.578	0.42249	1.00000
RegionR8	0.455	4.578	0.49535	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.821	4.578	0.32090	1.00000
RegenerationR2	-0.984	4.578	0.06349	0.41297
RegenerationR3	-0.773	4.578	0.13054	0.55385
RegenerationR4	0.315	4.578	0.57159	0.90202
RegenerationR5	0.492	4.578	0.34304	0.75969
RegenerationR6	0.993	4.578	0.07011	0.33180
RegenerationBL	0.392	4.578	0.47754	0.84317
RegenerationTP	-0.396	4.578	0.53123	0.92157

Genes with expression patterns similar to MligTC455_19414

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_19414	944	19.66	Mlig455_009508, Mlig455_070914	Neo: - Age: Down-Up-Up	MEIS3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_009508 {REF} {Length: 2771} {Pfam: N-terminal of Homeobox Meis and PKNOX1 [PF16493.7, score=118.7]; Homeobox KN domain [PF05920.13, score=67.7]; Homeodomain [PF00046.31, score=31.3]} {Human: ENSG00000105419, MEIS3, Meis homeobox 3, [RH, Score=273, Expect=6e-87]} {Mouse: ENSMUSG00000041420, Meis3, Meis homeobox 3, [RH, Score=272, Expect=9e-87]} {Dmel: FBgn0001235, hth, homothorax, [Score=249, Expect=5e-77]} {Celegans: WBGene00006796, unc-62, Homeobox protein unc-62, [Score=131, Expect=5e-33]} {Smed: dd_Smed_v6_8606_0_1, dd_Smed_v6_8606_0_1, [Score=171, Expect=4e-46]} {RNA1509_35777} {RNA1310_12463.1} {RNA815_15009} Mlig455_070914 {REF} {Length: 2786} {Pfam: N-terminal of Homeobox Meis and PKNOX1 [PF16493.7, score=118.6]; Homeobox KN domain [PF05920.13, score=67.6]; Homeodomain [PF00046.31, score=31.2]} {Human: ENSG00000105419, MEIS3, Meis homeobox 3, [RH, Score=271, Expect=4e-86]} {Mouse: ENSMUSG00000041420, Meis3, Meis homeobox 3, [RH, Score=271, Expect=3e-86]} {Dmel: FBgn0001235, hth, homothorax, [Score=249, Expect=5e-77]} {Celegans: WBGene00006796, unc-62, Homeobox protein unc-62, [Score=131, Expect=5e-33]} {Smed: dd_Smed_v6_8606_0_1, dd_Smed_v6_8606_0_1, [Score=169, Expect=2e-45]} {RNA1509_35777} {RNA1310_12463.1, RNA1509_35777} {RNA1509_35777, RNA815_15009}
2.	MligTC455_42343	1304	27.17	Mlig455_063169	Neo: Germline Age: - Region-enriched R4: 1.890/0.00018	SCP2	1.675	-	-	-	0.725	0.950	-	Mlig455_063169 {REF} {Length: 1895} {TRANSSPLICED} {Pfam: SCP-2 sterol transfer family [PF02036.19, score=88.8]; MDMPI C-terminal domain [PF07398.13, score=21.2]; Sterol carrier protein domain [PF13530.8, score=19.3]; Alkyl sulfatase C-terminal [PF14864.8, score=19.2]} {Human: ENSG00000116171, SCP2, sterol carrier protein 2, [Score=104, Expect=3e-29]} {Mouse: ENSMUSG00000028603, Scp2, sterol carrier protein 2, liver, [Score=105, Expect=6e-27]} {Dmel: FBgn0015808, ScpX, Sterol carrier protein X-related thiolase, [Score=108, Expect=4e-28]} {Smed: dd_Smed_v6_1403_0_1, dd_Smed_v6_1403_0_1, [RH, Score=130, Expect=8e-40]} {RNA1509_20094, RNA1509_53670} {RNA1310_43575.1, RNA1509_20094, RNA1509_53670} {RNA1509_20094, RNA1509_53670, RNA815_23129}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_19414

944

19.66

Mlig455_009508, Mlig455_070914

Neo: -

Age: Down-Up-Up

MEIS3

1.000

MligTC455_42343

1304

27.17

Mlig455_063169

Neo: Germline

Age: -

Region-enriched R4: 1.890/0.00018

SCP2

1.675

0.725

0.950

Mlig455_063169 {REF} {Length: 1895} {TRANSSPLICED} {Pfam: SCP-2 sterol transfer family [PF02036.19, score=88.8]; MDMPI C-terminal domain [PF07398.13, score=21.2]; Sterol carrier protein domain [PF13530.8, score=19.3]; Alkyl sulfatase C-terminal [PF14864.8, score=19.2]} {Human: ENSG00000116171, SCP2, sterol carrier protein 2, [Score=104, Expect=3e-29]} {Mouse: ENSMUSG00000028603, Scp2, sterol carrier protein 2, liver, [Score=105, Expect=6e-27]} {Dmel: FBgn0015808, ScpX, Sterol carrier protein X-related thiolase, [Score=108, Expect=4e-28]} {Smed: dd_Smed_v6_1403_0_1, dd_Smed_v6_1403_0_1, [RH, Score=130, Expect=8e-40]} {RNA1509_20094, RNA1509_53670} {RNA1310_43575.1, RNA1509_20094, RNA1509_53670} {RNA1509_20094, RNA1509_53670, RNA815_23129}