TomoSeq data search

Data search

Results for MligTC455_19415

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_19415	888	18.49	Mlig455_069321	Neo: - Age: - Regeneration-upregulated R3: 4.791 Regeneration-enriched R3: 4.791		Mlig455_069321 {REF} {Length: 1573} {RNA1509_42} {RNA1310_10769} {RNA815_3639}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_19415

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-8.175	4.357	0.03054	0.44709
RegionR2	2.482	4.357	0.08802	0.36459
RegionR3	-0.19	4.357	0.91483	1.00000
RegionR4	-2.686	4.357	1.00000	1.00000
RegionR5	0.933	4.357	0.36899	0.72166
RegionR6	1.935	4.357	0.07582	0.51128
RegionR7	1.894	4.357	0.21500	0.83141
RegionR8	3.807	4.357	0.02292	0.29495

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	12.103	4.357	0.00042	0.11489
RegenerationR2	2.932	4.357	0.00388	0.09575
RegenerationR3	4.791	4.357	0.00004	0.00655	Specific for R3: 4.791
RegenerationR4	3.516	4.357	0.00036	0.01718
RegenerationR5	2.106	4.357	0.02279	0.25925
RegenerationR6	1.509	4.357	0.13516	0.45093
RegenerationBL	1.853	4.357	0.09543	0.36276
RegenerationTP	2.745	4.357	0.01075	0.17600

Genes with expression patterns similar to MligTC455_19415

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_19415	888	18.49	Mlig455_069321	Neo: - Age: - Regeneration-upregulated R3: 4.791 Regeneration-enriched R3: 4.791	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_069321 {REF} {Length: 1573} {RNA1509_42} {RNA1310_10769} {RNA815_3639}
2.	MligTC455_51045	2486	51.79	Mlig455_018733, Mlig455_018756, Mlig455_018922	Neo: - Age: logFC(26M/2M)=-0.398 Region-enriched R7: 4.917/0.00000 Region-enriched R8: 4.485/0.00000 Regeneration-downregulated BL: -10.096 Regeneration-depleted BL: -10.096	0.979	-	-	0.979	-	-	-	Mlig455_018733 {REF} {Length: 2551} {RNA1509_18809, RNA1509_9923} {RNA1310_11934.1, RNA1509_18809, RNA1509_9923} {RNA1509_18809, RNA1509_9923, RNA815_19719} Mlig455_018756 {REF} {Length: 2499} {RNA1509_9923} {RNA1310_11934.1} {RNA815_19719} Mlig455_018922 {REF} {Length: 2536} {RNA1509_9923} {RNA1310_11934.1} {RNA815_19719}
3.	MligTC455_28756	33722	702.55	Mlig455_041173	Neo: - Age: Up-Down-Up Region-enriched R8: 1.344/0.02990	0.951	-	-	-	-	0.951	-	Mlig455_041173 {REF} {Length: 15531} {Pfam: Integrase core domain [PF00665.28, score=41.2]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=63.9, Expect=5e-13]} {RNA1509_28643} {RNA1310_576.1} {RNA815_1671.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_19415

888

18.49

Mlig455_069321

Neo: -

Age: -

Regeneration-upregulated R3: 4.791

Regeneration-enriched R3: 4.791

1.000

Mlig455_069321 {REF} {Length: 1573} {RNA1509_42} {RNA1310_10769} {RNA815_3639}

MligTC455_51045

2486

51.79

Mlig455_018733, Mlig455_018756, Mlig455_018922

Neo: -

Age: logFC(26M/2M)=-0.398

Region-enriched R7: 4.917/0.00000
Region-enriched R8: 4.485/0.00000

Regeneration-downregulated BL: -10.096

Regeneration-depleted BL: -10.096

0.979

Mlig455_018733 {REF} {Length: 2551} {RNA1509_18809, RNA1509_9923} {RNA1310_11934.1, RNA1509_18809, RNA1509_9923} {RNA1509_18809, RNA1509_9923, RNA815_19719}

Mlig455_018756 {REF} {Length: 2499} {RNA1509_9923} {RNA1310_11934.1} {RNA815_19719}

Mlig455_018922 {REF} {Length: 2536} {RNA1509_9923} {RNA1310_11934.1} {RNA815_19719}

MligTC455_28756

33722

702.55

Mlig455_041173

Neo: -

Age: Up-Down-Up

Region-enriched R8: 1.344/0.02990

0.951

Mlig455_041173 {REF} {Length: 15531} {Pfam: Integrase core domain [PF00665.28, score=41.2]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=63.9, Expect=5e-13]} {RNA1509_28643} {RNA1310_576.1} {RNA815_1671.1}