Data search


search
Exact
Search

Results for MligTC455_19488

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_19488 6406 133.45 Mlig455_005604, Mlig455_014456, Mlig455_070394

Neo: Int S/G2/M

Age: -

Region-enriched R4: 1.183/0.00000

CWC15

Mlig455_005604 {REF} {Length: 979} {TRANSSPLICED} {Pfam: Cwf15/Cwc15 cell cycle control protein [PF04889.14, score=245.7]} {Human: ENSG00000150316, CWC15, CWC15 spliceosome associated protein homolog, [RH, Score=194, Expect=1e-61]} {Mouse: ENSMUSG00000004096, Cwc15, CWC15 spliceosome-associated protein, [RH, Score=194, Expect=1e-61]} {Dmel: FBgn0040235, c12.1, [RH, Score=194, Expect=2e-61]} {Celegans: WBGene00011687, cwc-15, Protein CWC15 homolog, [RH, Score=202, Expect=6e-65]} {Smed: dd_Smed_v6_2881_0_1, dd_Smed_v6_2881_0_1, [RH, Score=159, Expect=4e-48]} {RNA1509_12912} {RNA1310_35872, RNA1509_12912} {RNA1509_12912, RNA815_16583}

Mlig455_014456 {REF} {Length: 979} {TRANSSPLICED} {Pfam: Cwf15/Cwc15 cell cycle control protein [PF04889.14, score=245.7]} {Human: ENSG00000150316, CWC15, CWC15 spliceosome associated protein homolog, [RH, Score=194, Expect=1e-61]} {Mouse: ENSMUSG00000004096, Cwc15, CWC15 spliceosome-associated protein, [RH, Score=194, Expect=1e-61]} {Dmel: FBgn0040235, c12.1, [RH, Score=194, Expect=2e-61]} {Celegans: WBGene00011687, cwc-15, Protein CWC15 homolog, [RH, Score=202, Expect=6e-65]} {Smed: dd_Smed_v6_2881_0_1, dd_Smed_v6_2881_0_1, [RH, Score=159, Expect=4e-48]} {RNA1509_19802} {RNA1310_35872} {RNA815_16583}

Mlig455_070394 {REF} {Length: 976} {TRANSSPLICED} {Pfam: Cwf15/Cwc15 cell cycle control protein [PF04889.14, score=245.7]} {Human: ENSG00000150316, CWC15, CWC15 spliceosome associated protein homolog, [RH, Score=194, Expect=1e-61]} {Mouse: ENSMUSG00000004096, Cwc15, CWC15 spliceosome-associated protein, [RH, Score=194, Expect=1e-61]} {Dmel: FBgn0040235, c12.1, [RH, Score=194, Expect=2e-61]} {Celegans: WBGene00011687, cwc-15, Protein CWC15 homolog, [RH, Score=202, Expect=6e-65]} {Smed: dd_Smed_v6_2881_0_1, dd_Smed_v6_2881_0_1, [RH, Score=159, Expect=4e-48]} {RNA1509_19802, RNA1509_33913} {RNA1310_35872, RNA1509_19802, RNA1509_33913} {RNA1509_19802, RNA1509_33913, RNA815_16583}

Cumulative graph for MligTC455_19488

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.14 7.172 0.73946 1.00000
RegionR2 -0.597 7.172 0.00783 0.08637
RegionR3 -0.115 7.172 0.54165 1.00000
RegionR4 1.183 7.172 0.00000 0.00000
RegionR5 0.48 7.172 0.00665 0.04296
RegionR6 -0.027 7.172 0.88636 1.00000
RegionR7 -0.087 7.172 0.68606 1.00000
RegionR8 -0.697 7.172 0.01257 0.21499

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -3.316 7.172 0.00013 0.06341
RegenerationR2 0.124 7.172 0.56986 0.90229
RegenerationR3 -0.203 7.172 0.37440 0.78666
RegenerationR4 -0.266 7.172 0.25721 0.70515
RegenerationR5 0.033 7.172 0.88080 1.00000
RegenerationR6 0.523 7.172 0.02223 0.18500
RegenerationBL 0.718 7.172 0.00104 0.02353
RegenerationTP 0.46 7.172 0.06567 0.41302


Genes with expression patterns similar to MligTC455_19488

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_19488 6406 133.45 Mlig455_005604, Mlig455_014456, Mlig455_070394

Neo: Int S/G2/M

Age: -

Region-enriched R4: 1.183/0.00000

CWC15 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_005604 {REF} {Length: 979} {TRANSSPLICED} {Pfam: Cwf15/Cwc15 cell cycle control protein [PF04889.14, score=245.7]} {Human: ENSG00000150316, CWC15, CWC15 spliceosome associated protein homolog, [RH, Score=194, Expect=1e-61]} {Mouse: ENSMUSG00000004096, Cwc15, CWC15 spliceosome-associated protein, [RH, Score=194, Expect=1e-61]} {Dmel: FBgn0040235, c12.1, [RH, Score=194, Expect=2e-61]} {Celegans: WBGene00011687, cwc-15, Protein CWC15 homolog, [RH, Score=202, Expect=6e-65]} {Smed: dd_Smed_v6_2881_0_1, dd_Smed_v6_2881_0_1, [RH, Score=159, Expect=4e-48]} {RNA1509_12912} {RNA1310_35872, RNA1509_12912} {RNA1509_12912, RNA815_16583}

Mlig455_014456 {REF} {Length: 979} {TRANSSPLICED} {Pfam: Cwf15/Cwc15 cell cycle control protein [PF04889.14, score=245.7]} {Human: ENSG00000150316, CWC15, CWC15 spliceosome associated protein homolog, [RH, Score=194, Expect=1e-61]} {Mouse: ENSMUSG00000004096, Cwc15, CWC15 spliceosome-associated protein, [RH, Score=194, Expect=1e-61]} {Dmel: FBgn0040235, c12.1, [RH, Score=194, Expect=2e-61]} {Celegans: WBGene00011687, cwc-15, Protein CWC15 homolog, [RH, Score=202, Expect=6e-65]} {Smed: dd_Smed_v6_2881_0_1, dd_Smed_v6_2881_0_1, [RH, Score=159, Expect=4e-48]} {RNA1509_19802} {RNA1310_35872} {RNA815_16583}

Mlig455_070394 {REF} {Length: 976} {TRANSSPLICED} {Pfam: Cwf15/Cwc15 cell cycle control protein [PF04889.14, score=245.7]} {Human: ENSG00000150316, CWC15, CWC15 spliceosome associated protein homolog, [RH, Score=194, Expect=1e-61]} {Mouse: ENSMUSG00000004096, Cwc15, CWC15 spliceosome-associated protein, [RH, Score=194, Expect=1e-61]} {Dmel: FBgn0040235, c12.1, [RH, Score=194, Expect=2e-61]} {Celegans: WBGene00011687, cwc-15, Protein CWC15 homolog, [RH, Score=202, Expect=6e-65]} {Smed: dd_Smed_v6_2881_0_1, dd_Smed_v6_2881_0_1, [RH, Score=159, Expect=4e-48]} {RNA1509_19802, RNA1509_33913} {RNA1310_35872, RNA1509_19802, RNA1509_33913} {RNA1509_19802, RNA1509_33913, RNA815_16583}
2. MligTC455_51249 3146 65.54 Mlig455_055091, Mlig455_055138, Mlig455_064031

Neo: -

Age: -

Region-enriched R5: 1.125/0.00002

DYNLT1 3.255 0.785 0.723 - 0.789 - 0.958

Mlig455_055091 {REF} {Length: 880} {TRANSSPLICED} {Pfam: Tctex-1 family [PF03645.15, score=108.9]} {Human: ENSG00000146425, DYNLT1, dynein light chain Tctex-type 1, [Score=158, Expect=3e-51]} {Mouse: ENSMUSG00000092074, Dynlt1a, dynein light chain Tctex-type 1A, [Score=154, Expect=8e-50]; ENSMUSG00000095677, Dynlt1f, dynein light chain Tctex-type 1F, [Score=154, Expect=8e-50]; ENSMUSG00000096255, Dynlt1b, dynein light chain Tctex-type 1B, [Score=154, Expect=8e-50]; ENSMUSG00000000579, Dynlt1c, dynein light chain Tctex-type 1C, [Score=154, Expect=8e-50]} {Dmel: FBgn0024432, Dlc90F, Dynein light chain 90F, [Score=142, Expect=3e-45]} {Celegans: WBGene00008764, dylt-1, DYnein Light chain (Tctex type), [RH, Score=75.9, Expect=5e-19]} {Smed: dd_Smed_v6_1166_0_1, dd_Smed_v6_1166_0_1, [Score=162, Expect=3e-53]} {RNA1509_16875, RNA1509_29658, RNA1509_42607, RNA1509_50623} {RNA1310_32911, RNA1509_16875, RNA1509_29658, RNA1509_42607} {RNA1509_16875, RNA1509_29658, RNA1509_42607, RNA815_19138}

Mlig455_055138 {REF} {Length: 879} {TRANSSPLICED} {Pfam: Tctex-1 family [PF03645.15, score=110.1]} {Human: ENSG00000146425, DYNLT1, dynein light chain Tctex-type 1, [Score=161, Expect=7e-52]} {Mouse: ENSMUSG00000000579, Dynlt1c, dynein light chain Tctex-type 1C, [Score=157, Expect=2e-50]; ENSMUSG00000092074, Dynlt1a, dynein light chain Tctex-type 1A, [Score=157, Expect=2e-50]; ENSMUSG00000095677, Dynlt1f, dynein light chain Tctex-type 1F, [Score=157, Expect=2e-50]; ENSMUSG00000096255, Dynlt1b, dynein light chain Tctex-type 1B, [Score=157, Expect=2e-50]} {Dmel: FBgn0024432, Dlc90F, Dynein light chain 90F, [Score=144, Expect=1e-45]} {Celegans: WBGene00008764, dylt-1, DYnein Light chain (Tctex type), [RH, Score=76.3, Expect=7e-19]} {Smed: dd_Smed_v6_1166_0_1, dd_Smed_v6_1166_0_1, [Score=164, Expect=1e-53]} {RNA1509_50623} {RNA1310_32911} {RNA815_19138}

Mlig455_064031 {REF} {Length: 985} {Pfam: Tctex-1 family [PF03645.15, score=110.1]} {Human: ENSG00000146425, DYNLT1, dynein light chain Tctex-type 1, [Score=161, Expect=7e-52]} {Mouse: ENSMUSG00000000579, Dynlt1c, dynein light chain Tctex-type 1C, [Score=157, Expect=2e-50]; ENSMUSG00000092074, Dynlt1a, dynein light chain Tctex-type 1A, [Score=157, Expect=2e-50]; ENSMUSG00000095677, Dynlt1f, dynein light chain Tctex-type 1F, [Score=157, Expect=2e-50]; ENSMUSG00000096255, Dynlt1b, dynein light chain Tctex-type 1B, [Score=157, Expect=2e-50]} {Dmel: FBgn0024432, Dlc90F, Dynein light chain 90F, [Score=144, Expect=1e-45]} {Celegans: WBGene00008764, dylt-1, DYnein Light chain (Tctex type), [RH, Score=76.3, Expect=7e-19]} {Smed: dd_Smed_v6_1166_0_1, dd_Smed_v6_1166_0_1, [Score=164, Expect=1e-53]} {RNA1509_50623} {RNA1310_32911, RNA1509_50623} {RNA1509_50623, RNA815_19138}
3. MligTC455_37566 487 10.15 Mlig455_012335

Neo: -

Age: -

Region-enriched R4: 2.321/0.00580
Region-enriched R5: 2.072/0.00095

MPV17L2 1.852 - - - 0.970 - 0.882 Mlig455_012335 {REF} {Length: 970} {Pfam: Mpv17 / PMP22 family [PF04117.14, score=64.5]} {Human: ENSG00000254858, MPV17L2, MPV17 mitochondrial inner membrane protein like 2, [Score=97.8, Expect=8e-25]} {Mouse: ENSMUSG00000035559, Mpv17l2, MPV17 mitochondrial membrane protein-like 2, [Score=93.6, Expect=2e-23]; ENSMUSG00000111476, Mpv17l2, MPV17 mitochondrial membrane protein-like 2, [Score=93.6, Expect=2e-23]} {Dmel: FBgn0030481, CG1662, [Score=112, Expect=2e-30]} {Celegans: WBGene00022744, ZK470.1, [Score=73.9, Expect=2e-16]} {Smed: dd_Smed_v6_13953_0_1, dd_Smed_v6_13953_0_1, [Score=54.3, Expect=3e-09]} {RNA1509_35977, RNA1509_58154} {RNA1310_39934, RNA1509_35977, RNA1509_58154} {RNA1509_35977, RNA1509_58154, RNA815_18530.1}
4. MligTC455_44167 1076 22.43 Mlig455_059891

Neo: -

Age: logFC(26M/2M)=0.416

Regeneration-upregulated BL: 1.576

Regeneration-enriched BL: 1.576

SRSF7 1.822 - - - 0.851 - 0.971 Mlig455_059891 {REF} {Length: 1013} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=61.9]; RNA recognition motif [PF16367.7, score=23.9]; Zinc knuckle [PF00098.25, score=22.0]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=19.8]; Zinc knuckle [PF13917.8, score=19.5]} {Human: ENSG00000115875, SRSF7, serine and arginine rich splicing factor 7, [RH, Score=147, Expect=3e-45]} {Mouse: ENSMUSG00000024097, Srsf7, serine/arginine-rich splicing factor 7, [RH, Score=147, Expect=2e-45]} {Dmel: FBgn0028554, x16, x16 splicing factor, [RH, Score=105, Expect=5e-28]} {Celegans: WBGene00013293, Y57G11A.5, [Score=76.6, Expect=2e-18]} {Smed: dd_Smed_v6_2424_0_1, dd_Smed_v6_2424_0_1, [RH, Score=129, Expect=9e-39]} {RNA1509_37237, RNA1509_48999} {RNA1310_34684.1, RNA1509_48999} {RNA1509_48999, RNA815_20639}
5. MligTC455_50593 1562 32.54 Mlig455_016015, Mlig455_059733

Neo: Neoblast, stringent

Age: -

TK2 1.794 - - - 0.953 - 0.841

Mlig455_016015 {REF} {Length: 1538} {TRANSSPLICED} {Pfam: Deoxynucleoside kinase [PF01712.21, score=57.7]} {Human: ENSG00000166548, TK2, thymidine kinase 2, mitochondrial, [Score=65.9, Expect=3e-13]} {Mouse: ENSMUSG00000014554, Dguok, deoxyguanosine kinase, [Score=62.0, Expect=4e-12]; ENSMUSG00000029366, Dck, deoxycytidine kinase, [Score=59.7, Expect=3e-11]} {Dmel: FBgn0022338, dnk, deoxyribonucleoside kinase, [Score=70.9, Expect=1e-15]} {RNA1509_10988} {RNA1310_30595.1} {RNA815_13849}

Mlig455_059733 {REF} {Length: 1097} {TRANSSPLICED} {Pfam: Deoxynucleoside kinase [PF01712.21, score=167.9]; AAA domain [PF13238.8, score=31.5]; AAA domain [PF13671.8, score=24.2]} {Human: ENSG00000166548, TK2, thymidine kinase 2, mitochondrial, [Score=166, Expect=1e-49]} {Mouse: ENSMUSG00000035824, Tk2, thymidine kinase 2, mitochondrial, [Score=162, Expect=1e-48]} {Dmel: FBgn0022338, dnk, deoxyribonucleoside kinase, [Score=167, Expect=3e-51]} {RNA1509_10988} {RNA1310_30595.1} {RNA815_13849}
6. MligTC455_32593 951 19.81 Mlig455_064263

Neo: Int S/G2/M

Age: -

1.778 - - - 0.815 - 0.963 Mlig455_064263 {REF} {Length: 1861} {RNA1509_7288} {RNA1310_2032.1} {RNA815_9282}
7. MligTC455_32592 949 19.77 Mlig455_001404

Neo: -

Age: -

INTS3 1.777 - - - 0.815 - 0.962 Mlig455_001404 {REF} {Length: 4232} {Pfam: Integrator complex subunit 3 N-terminal [PF10189.11, score=457.6]} {Human: ENSG00000262826, INTS3, integrator complex subunit 3, [RH, Score=380, Expect=4e-113]; ENSG00000143624, INTS3, integrator complex subunit 3, [RH, Score=380, Expect=4e-113]} {Mouse: ENSMUSG00000027933, Ints3, integrator complex subunit 3, [RH, Score=382, Expect=5e-114]} {Dmel: FBgn0262117, IntS3, Integrator 3, [RH, Score=345, Expect=1e-100]} {Celegans: WBGene00022360, Y92H12A.4, [RH, Score=119, Expect=5e-27]} {Smed: dd_Smed_v6_4426_0_1, dd_Smed_v6_4426_0_1, [RH, Score=496, Expect=1e-155]} {RNA1509_7288} {RNA1310_2032.1, RNA1509_7288} {RNA1509_7288, RNA815_5593}
8. MligTC455_46440 389 8.11 Mlig455_016382

Neo: -

Age: -

Region-enriched R4: 3.391/0.00015
Region-enriched R5: 1.757/0.03631

ARF6 1.744 - - - 0.785 - 0.959 Mlig455_016382 {REF} {Length: 2538} {TRANSSPLICED} {Pfam: ADP-ribosylation factor family [PF00025.23, score=243.2]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=56.2]; Ras family [PF00071.24, score=50.6]; Signal recognition particle receptor beta subunit [PF09439.12, score=46.0]; G-protein alpha subunit [PF00503.22, score=40.7]; Gtr1/RagA G protein conserved region [PF04670.14, score=31.2]; 50S ribosome-binding GTPase [PF01926.25, score=21.3]; 6-phosphofructo-2-kinase [PF01591.20, score=19.4]} {Human: ENSG00000165527, ARF6, ADP ribosylation factor 6, [RH, Score=307, Expect=4e-108]} {Mouse: ENSMUSG00000044147, Arf6, ADP-ribosylation factor 6, [RH, Score=307, Expect=3e-108]} {Dmel: FBgn0013750, Arf51F, ADP ribosylation factor at 51F, [RH, Score=300, Expect=2e-105]} {Celegans: WBGene00000184, arf-6, ADP-Ribosylation Factor related, [RH, Score=289, Expect=3e-101]} {Smed: dd_Smed_v6_2125_0_1, dd_Smed_v6_2125_0_1, [RH, Score=288, Expect=3e-101]} {RNA1509_40160, RNA1509_41550, RNA1509_48721} {RNA1310_39051.1, RNA1509_40160, RNA1509_41550, RNA1509_48721} {RNA1509_40160, RNA1509_41550, RNA1509_48721, RNA815_18791}
9. MligTC455_20006 1581 32.94 Mlig455_029560, Mlig455_040442, Mlig455_040470

Neo: -

Age: Down-Down-Up

Region-enriched R4: 1.124/0.02503

RXRA 1.69 - - - 0.722 - 0.968

Mlig455_029560 {REF} {Length: 1833} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=102.6]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=85.5]} {Human: ENSG00000186350, RXRA, retinoid X receptor alpha, [Score=360, Expect=4e-122]; ENSG00000143171, RXRG, retinoid X receptor gamma, [Score=344, Expect=1e-117]} {Mouse: ENSMUSG00000015846, Rxra, retinoid X receptor alpha, [Score=358, Expect=7e-122]; ENSMUSG00000015843, Rxrg, retinoid X receptor gamma, [Score=343, Expect=2e-117]} {Dmel: FBgn0003651, svp, seven up, [Score=210, Expect=2e-63]} {Celegans: WBGene00003639, nhr-49, Nuclear hormone receptor family member nhr-49, [Score=136, Expect=2e-36]} {Smed: dd_Smed_v6_12699_0_1, dd_Smed_v6_12699_0_1, [Score=207, Expect=5e-62]} {RNA1509_54992} {RNA1310_20454} {RNA815_10257}

Mlig455_040442 {REF} {Length: 1996} {TRANSSPLICED} {Pfam: Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=125.8]; Zinc finger, C4 type (two domains) [PF00105.20, score=102.3]} {Human: ENSG00000186350, RXRA, retinoid X receptor alpha, [RH, Score=437, Expect=1e-151]; ENSG00000143171, RXRG, retinoid X receptor gamma, [RH, Score=431, Expect=4e-151]} {Mouse: ENSMUSG00000015846, Rxra, retinoid X receptor alpha, [RH, Score=438, Expect=5e-152]; ENSMUSG00000015843, Rxrg, retinoid X receptor gamma, [RH, Score=420, Expect=1e-146]} {Dmel: FBgn0003651, svp, seven up, [Score=242, Expect=9e-75]} {Celegans: WBGene00003639, nhr-49, Nuclear hormone receptor family member nhr-49, [RH, Score=172, Expect=7e-49]} {Smed: dd_Smed_v6_12699_0_1, dd_Smed_v6_12699_0_1, [RH, Score=261, Expect=1e-81]} {RNA1509_24567, RNA1509_54992} {RNA1310_20454, RNA1509_54992} {RNA1509_54992, RNA815_10257}

Mlig455_040470 {REF} {Length: 2001} {TRANSSPLICED} {Pfam: Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=125.8]; Zinc finger, C4 type (two domains) [PF00105.20, score=102.3]} {Human: ENSG00000186350, RXRA, retinoid X receptor alpha, [RH, Score=437, Expect=1e-151]; ENSG00000143171, RXRG, retinoid X receptor gamma, [RH, Score=431, Expect=4e-151]} {Mouse: ENSMUSG00000015846, Rxra, retinoid X receptor alpha, [RH, Score=438, Expect=5e-152]; ENSMUSG00000015843, Rxrg, retinoid X receptor gamma, [RH, Score=420, Expect=1e-146]} {Dmel: FBgn0003651, svp, seven up, [Score=242, Expect=9e-75]} {Celegans: WBGene00003639, nhr-49, Nuclear hormone receptor family member nhr-49, [RH, Score=172, Expect=7e-49]} {Smed: dd_Smed_v6_12699_0_1, dd_Smed_v6_12699_0_1, [RH, Score=261, Expect=1e-81]} {RNA1509_24567, RNA1509_52519} {RNA1310_20454, RNA1509_24567, RNA1509_52519} {RNA1509_24567, RNA1509_52519, RNA815_10257}
10. MligTC455_32077 240 4.99 Mlig455_032957

Neo: -

Age: -

1.675 - - - 0.954 - 0.721 Mlig455_032957 {REF} {Length: 4172} {TRANSSPLICED} {RNA1509_19305, RNA1509_34564} {RNA1310_20429.1, RNA1509_19305, RNA1509_34564} {RNA1509_19305, RNA1509_34564, RNA815_7869}
11. MligTC455_37890 984 20.5 Mlig455_042120

Neo: -

Age: Up-Down-Down

MOB1B 0.972 - - - - - 0.972 Mlig455_042120 {REF} {Length: 5175} {TRANSSPLICED} {Pfam: Mob1/phocein family [PF03637.19, score=262.4]} {Human: ENSG00000173542, MOB1B, MOB kinase activator 1B, [RH, Score=374, Expect=1e-132]; ENSG00000114978, MOB1A, MOB kinase activator 1A, [RH, Score=371, Expect=1e-131]} {Mouse: ENSMUSG00000006262, Mob1b, MOB kinase activator 1B, [RH, Score=374, Expect=7e-133]; ENSMUSG00000043131, Mob1a, MOB kinase activator 1A, [RH, Score=371, Expect=1e-131]} {Dmel: FBgn0038965, mats, mob as tumor suppressor, [RH, Score=368, Expect=1e-130]} {Celegans: WBGene00020447, mob-3, [Score=223, Expect=3e-73]} {Smed: dd_Smed_v6_6548_0_1, dd_Smed_v6_6548_0_1, [RH, Score=370, Expect=3e-131]} {RNA1509_17457, RNA1509_35281, RNA1509_9427} {RNA1310_36797, RNA1509_17457, RNA1509_35281, RNA1509_9427} {RNA1509_17457, RNA1509_35281, RNA1509_9427, RNA815_14863}
12. MligTC455_39056 444 9.25 Mlig455_067790

Neo: -

Age: -

PTPA 0.971 - - - - - 0.971 Mlig455_067790 {REF} {Length: 1472} {TRANSSPLICED} {Pfam: Phosphotyrosyl phosphate activator (PTPA) protein [PF03095.17, score=377.2]} {Human: ENSG00000119383, PTPA, protein phosphatase 2 phosphatase activator, [RH, Score=313, Expect=8e-106]} {Mouse: ENSMUSG00000039515, Ptpa, protein phosphatase 2 protein activator, [RH, Score=313, Expect=5e-106]} {Dmel: FBgn0016698, Ptpa, Phosphotyrosyl phosphatase activator, [RH, Score=279, Expect=6e-92]} {Celegans: WBGene00022185, Y71H2AM.20, Serine/threonine-protein phosphatase 2A activator, [RH, Score=246, Expect=2e-79]} {Smed: dd_Smed_v6_9304_0_1, dd_Smed_v6_9304_0_1, [RH, Score=267, Expect=2e-88]} {RNA1509_28140, RNA1509_35622, RNA1509_55557} {RNA1310_16874, RNA1509_28140, RNA1509_35622, RNA1509_55557} {RNA1509_28140, RNA1509_35622, RNA1509_55557, RNA815_7245}
13. MligTC455_41788 2241 46.68 Mlig455_062584

Neo: Int S/G2/M

Age: -

HNRNPU 0.966 - - - 0.966 - - Mlig455_062584 {REF} {Length: 4700} {Pfam: AAA domain [PF13671.8, score=65.4]; SAP domain [PF02037.29, score=41.0]; SPRY domain [PF00622.30, score=36.9]} {Human: ENSG00000153187, HNRNPU, heterogeneous nuclear ribonucleoprotein U, [Score=231, Expect=2e-62]} {Mouse: ENSMUSG00000111145, Hnrnpu, heterogeneous nuclear ribonucleoprotein U, [Score=233, Expect=2e-63]; ENSMUSG00000039630, Hnrnpu, heterogeneous nuclear ribonucleoprotein U, [Score=233, Expect=2e-63]} {Dmel: FBgn0050122, CG30122, [Score=145, Expect=1e-34]} {Celegans: WBGene00012769, hrpu-1, Heterogeneous nuclear RibonucleoProtein U, [Score=125, Expect=5e-29]} {Smed: dd_Smed_v6_1485_0_1, dd_Smed_v6_1485_0_1, [Score=264, Expect=3e-72]} {RNA1509_16487, RNA1509_2596, RNA1509_47282, RNA1509_57980} {RNA1310_1119, RNA1509_16487, RNA1509_2596, RNA1509_47282, RNA1509_57980} {RNA1509_16487, RNA1509_2596, RNA1509_47282, RNA1509_57980, RNA815_630.1}
14. MligTC455_51076 304 6.33 Mlig455_060575

Neo: -

Age: Down-Down-Up

ARFGEF3 0.96 - - - - - 0.960 Mlig455_060575 {REF} {Length: 7036} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF1981) [PF09324.12, score=27.7]} {Human: ENSG00000112379, ARFGEF3, ARFGEF family member 3, [RH, Score=316, Expect=5e-87]} {Mouse: ENSMUSG00000019852, Arfgef3, ARFGEF family member 3, [Score=290, Expect=6e-79]} {Dmel: FBgn0029834, CG5937, [Score=243, Expect=1e-64]} {Celegans: WBGene00012386, agef-1, Arf-1 Guanine nucleotide Exchange Factor homolog, [Score=73.6, Expect=1e-12]} {Smed: dd_Smed_v6_5314_0_2, dd_Smed_v6_5314_0_2, [Score=69.7, Expect=1e-11]} {RNA1509_14718} {RNA1310_5931} {RNA815_20733}
15. MligTC455_49811 323 6.73 Mlig455_035309

Neo: Int S/G2/M

Age: -

ASCC2 0.957 - - - - - 0.957 Mlig455_035309 {REF} {Length: 4782} {Pfam: CUE domain [PF02845.18, score=31.9]} {Human: ENSG00000100325, ASCC2, activating signal cointegrator 1 complex subunit 2, [Score=224, Expect=2e-61]} {Mouse: ENSMUSG00000020412, Ascc2, activating signal cointegrator 1 complex subunit 2, [Score=189, Expect=9e-50]} {Dmel: FBgn0024973, CG2701, [Score=82.8, Expect=8e-16]} {RNA1509_34484, RNA1509_7044} {RNA1310_7597, RNA1509_34484} {RNA1509_34484, RNA815_1952.1}
16. MligTC455_25959 453 9.44 Mlig455_023213

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.340

Region-enriched R4: 2.491/0.00064
Region-enriched R5: 1.209/0.04560

0.954 - - - - - 0.954 Mlig455_023213 {REF} {Length: 2999} {TRANSSPLICED} {Pfam: PTB domain (IRS-1 type) [PF02174.19, score=25.1]} {RNA1509_27081} {RNA1310_31981} {RNA815_11740}
17. MligTC455_49625 1156 24.09 Mlig455_060365

Neo: -

Age: -

ZFR2 0.954 - - - - - 0.954 Mlig455_060365 {REF} {Length: 2416} {TRANSSPLICED} {Pfam: Zinc-finger of C2H2 type [PF12874.9, score=73.6]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=37.3]; SF3a60/Prp9 C-terminal [PF11931.10, score=24.3]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=20.2]} {Human: ENSG00000105278, ZFR2, zinc finger RNA binding protein 2, [Score=51.6, Expect=2e-06]; ENSG00000161642, ZNF385A, zinc finger protein 385A, [Score=50.1, Expect=7e-06]} {Mouse: ENSMUSG00000000552, Zfp385a, zinc finger protein 385A, [Score=50.4, Expect=4e-06]} {RNA1509_54420} {RNA1310_18764} {RNA815_3566}
18. MligTC455_37916 1391 28.98 Mlig455_068757

Neo: -

Age: -

DNAJC3 0.953 - - - - - 0.953 Mlig455_068757 {REF} {Length: 5115} {Pfam: Tetratricopeptide repeat [PF00515.30, score=127.1]; Tetratricopeptide repeat [PF07719.19, score=109.6]; TPR repeat [PF13414.8, score=99.6]; Tetratricopeptide repeat [PF13181.8, score=90.8]; Tetratricopeptide repeat [PF14559.8, score=81.7]; DnaJ domain [PF00226.33, score=75.0]; Tetratricopeptide repeat [PF13431.8, score=70.6]; Tetratricopeptide repeat [PF13428.8, score=68.2]; Tetratricopeptide repeat [PF13432.8, score=66.3]; Tetratricopeptide repeat [PF13371.8, score=64.4]; Tetratricopeptide repeat [PF13424.8, score=50.4]; Tetratricopeptide repeat [PF13174.8, score=41.6]; Alkyl sulfatase dimerisation [PF14863.8, score=29.7]; Tetratricopeptide repeat [PF13176.8, score=28.5]; Fis1 C-terminal tetratricopeptide repeat [PF14853.8, score=27.9]; Tetratricopeptide repeat [PF14561.8, score=27.0]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=25.4]; Tetratricopeptide repeat [PF13374.8, score=21.6]} {Human: ENSG00000102580, DNAJC3, DnaJ heat shock protein family (Hsp40) member C3, [RH, Score=410, Expect=8e-139]} {Mouse: ENSMUSG00000022136, Dnajc3, DnaJ heat shock protein family (Hsp40) member C3, [RH, Score=405, Expect=5e-137]} {Dmel: FBgn0037718, P58IPK, [RH, Score=382, Expect=7e-128]} {Celegans: WBGene00001025, dnj-7, DNaJ domain (Prokaryotic heat shock protein), [RH, Score=352, Expect=1e-116]} {Smed: dd_Smed_v6_4016_0_1, dd_Smed_v6_4016_0_1, [RH, Score=462, Expect=5e-160]} {RNA1509_43673, RNA1509_4903} {RNA1310_4191.1, RNA1509_43673, RNA1509_4903} {RNA1509_43673, RNA1509_4903, RNA815_4472}
19. MligTC455_53585 369 7.68 Mlig455_034445

Neo: -

Age: -

YRDC 0.953 - - - - - 0.953 Mlig455_034445 {REF} {Length: 1952} {Pfam: Telomere recombination [PF01300.20, score=144.6]} {Human: ENSG00000196449, YRDC, yrdC N6-threonylcarbamoyltransferase domain containing, [RH, Score=143, Expect=9e-41]} {Mouse: ENSMUSG00000028889, Yrdc, yrdC domain containing (E.coli), [RH, Score=138, Expect=5e-39]} {Dmel: FBgn0061361, CG33786, [RH, Score=144, Expect=7e-42]} {Celegans: WBGene00012997, Y48C3A.18, [RH, Score=128, Expect=3e-36]} {Smed: dd_Smed_v6_8890_0_1, dd_Smed_v6_8890_0_1, [RH, Score=147, Expect=2e-43]} {RNA1509_7035} {RNA1310_27330} {RNA815_16077.1}
20. MligTC455_20351 1824 38 Mlig455_019951, Mlig455_020022

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.144/0.00068

DDX17 0.952 - - - - - 0.952

Mlig455_019951 {REF} {Length: 2463} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=162.7]; Helicase conserved C-terminal domain [PF00271.33, score=107.8]; Type III restriction enzyme, res subunit [PF04851.17, score=20.2]} {Human: ENSG00000100201, DDX17, DEAD-box helicase 17, [RH, Score=523, Expect=3e-179]; ENSG00000108654, DDX5, DEAD-box helicase 5, [RH, Score=517, Expect=2e-178]} {Mouse: ENSMUSG00000055065, Ddx17, DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, [RH, Score=523, Expect=1e-180]; ENSMUSG00000020719, Ddx5, DEAD (Asp-Glu-Ala-Asp) box polypeptide 5, [RH, Score=515, Expect=5e-178]} {Dmel: FBgn0035720, CG10077, [RH, Score=504, Expect=3e-171]} {Celegans: WBGene00010260, ddx-17, DEAD boX helicase homolog, [RH, Score=462, Expect=3e-158]} {Smed: dd_Smed_v6_3743_0_2, dd_Smed_v6_3743_0_2, [RH, Score=525, Expect=0.0]} {RNA1509_4339, RNA1509_46098} {RNA1310_12456.1, RNA1509_46098} {RNA1509_46098, RNA815_4698}

Mlig455_020022 {REF} {Length: 2509} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=163.3]; Helicase conserved C-terminal domain [PF00271.33, score=108.3]; Type III restriction enzyme, res subunit [PF04851.17, score=19.0]} {Human: ENSG00000100201, DDX17, DEAD-box helicase 17, [RH, Score=522, Expect=5e-179]; ENSG00000108654, DDX5, DEAD-box helicase 5, [RH, Score=517, Expect=1e-178]} {Mouse: ENSMUSG00000055065, Ddx17, DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, [RH, Score=523, Expect=2e-180]; ENSMUSG00000020719, Ddx5, DEAD (Asp-Glu-Ala-Asp) box polypeptide 5, [RH, Score=516, Expect=2e-178]} {Dmel: FBgn0035720, CG10077, [RH, Score=503, Expect=8e-171]} {Celegans: WBGene00010260, ddx-17, DEAD boX helicase homolog, [RH, Score=464, Expect=4e-159]} {Smed: dd_Smed_v6_3743_0_2, dd_Smed_v6_3743_0_2, [RH, Score=527, Expect=0.0]} {RNA1509_4339} {RNA1310_12456.1} {RNA815_4698}
21. MligTC455_29098 1393 29.02 Mlig455_045705, Mlig455_071016

Neo: Int S/G2/M

Age: -

UTP15 0.951 - - - 0.951 - -

Mlig455_045705 {REF} {Length: 3350} {Pfam: UTP15 C terminal [PF09384.12, score=86.0]; WD domain, G-beta repeat [PF00400.34, score=24.5]} {Human: ENSG00000164338, UTP15, UTP15, small subunit processome component, [RH, Score=150, Expect=6e-39]} {Mouse: ENSMUSG00000041747, Utp15, UTP15 small subunit processome component, [RH, Score=151, Expect=3e-39]} {Dmel: FBgn0023527, CG3071, [RH, Score=126, Expect=1e-30]} {Celegans: WBGene00021276, Y23H5B.5, [RH, Score=94.7, Expect=3e-20]} {Smed: dd_Smed_v6_11754_0_1, dd_Smed_v6_11754_0_1, [RH, Score=66.6, Expect=2e-11]} {RNA1509_10775, RNA1509_37861} {RNA1310_10989, RNA1509_10775, RNA1509_37861} {RNA1509_10775, RNA1509_37861, RNA815_4099}

Mlig455_071016 {REF} {Length: 2889} {Pfam: UTP15 C terminal [PF09384.12, score=86.0]; WD domain, G-beta repeat [PF00400.34, score=24.5]} {Human: ENSG00000164338, UTP15, UTP15, small subunit processome component, [RH, Score=150, Expect=6e-39]} {Mouse: ENSMUSG00000041747, Utp15, UTP15 small subunit processome component, [RH, Score=151, Expect=3e-39]} {Dmel: FBgn0023527, CG3071, [RH, Score=126, Expect=1e-30]} {Celegans: WBGene00021276, Y23H5B.5, [RH, Score=94.7, Expect=3e-20]} {Smed: dd_Smed_v6_11754_0_1, dd_Smed_v6_11754_0_1, [RH, Score=66.6, Expect=2e-11]} {RNA1509_10775} {RNA1310_10989} {RNA815_4099}
22. MligTC455_34113 1984 41.33 Mlig455_017524

Neo: -

Age: -

EIF4B 0.951 - - - - - 0.951 Mlig455_017524 {REF} {Length: 4615} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=42.1]} {Human: ENSG00000063046, EIF4B, eukaryotic translation initiation factor 4B, [RH, Score=90.5, Expect=3e-18]} {Mouse: ENSMUSG00000058655, Eif4b, eukaryotic translation initiation factor 4B, [RH, Score=90.5, Expect=2e-18]} {Dmel: FBgn0020660, eIF4B, eukaryotic translation initiation factor 4B, [RH, Score=90.1, Expect=7e-19]} {Smed: dd_Smed_v6_3282_1_1, dd_Smed_v6_3282_1_1, [Score=54.3, Expect=2e-07]} {RNA1509_29122} {RNA1310_2611} {RNA815_2592.1}
23. MligTC455_44224 1425 29.69 Mlig455_029951, Mlig455_067209

Neo: -

Age: -

Regeneration-upregulated BL: 1.921

Regeneration-enriched BL: 1.921

TRIM3, TRIM71 0.95 - - - - - 0.950

Mlig455_029951 {REF} {Length: 8382} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=78.4]; B-box zinc finger [PF00643.26, score=30.4]; 6-bladed beta-propeller [PF17170.6, score=22.3]; RING-type zinc-finger [PF13445.8, score=19.5]} {Human: ENSG00000206557, TRIM71, tripartite motif containing 71, [Score=119, Expect=9e-27]; ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=119, Expect=7e-27]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=118, Expect=9e-27]} {Dmel: FBgn0026206, mei-P26, meiotic P26, [RH, Score=466, Expect=9e-147]} {Celegans: WBGene00003598, nhl-2, NHL (Ring finger b-box coiled coil) domain containing, [RH, Score=195, Expect=5e-51]} {Smed: dd_Smed_v6_6250_0_1, dd_Smed_v6_6250_0_1, [RH, Score=583, Expect=0.0]} {RNA1509_3154} {RNA1310_1339} {RNA815_5017}

Mlig455_067209 {REF} {Length: 8386} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=78.4]; B-box zinc finger [PF00643.26, score=30.4]; 6-bladed beta-propeller [PF17170.6, score=22.4]; RING-type zinc-finger [PF13445.8, score=19.4]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=119, Expect=4e-27]; ENSG00000206557, TRIM71, tripartite motif containing 71, [Score=119, Expect=7e-27]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=119, Expect=6e-27]} {Dmel: FBgn0026206, mei-P26, meiotic P26, [RH, Score=468, Expect=3e-147]} {Celegans: WBGene00003598, nhl-2, NHL (Ring finger b-box coiled coil) domain containing, [RH, Score=195, Expect=4e-51]} {Smed: dd_Smed_v6_6250_0_1, dd_Smed_v6_6250_0_1, [RH, Score=584, Expect=0.0]} {RNA1509_3154, RNA1509_40626, RNA1509_47998} {RNA1310_1339, RNA1509_3154, RNA1509_40626, RNA1509_47998} {RNA1509_3154, RNA1509_40626, RNA1509_47998, RNA815_5017}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA