Data search
Results for MligTC455_19497
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_19497 | 211 | 4.40 | Mlig455_057208 | Neo: Germline Age: Up-Down-Down Region-enriched R4: 1.834/0.04664 |
SPTBN1 | Mlig455_057208 {REF} {Length: 2673} {Pfam: Pleckstrin homology domain [PF15410.8, score=69.7]; PH domain [PF00169.31, score=47.6]; Spectrin repeat [PF00435.23, score=43.2]} {Human: ENSG00000115306, SPTBN1, spectrin beta, non-erythrocytic 1, [Score=155, Expect=2e-41]} {Mouse: ENSMUSG00000021061, Sptb, spectrin beta, erythrocytic, [Score=83.6, Expect=4e-17]; ENSMUSG00000020315, Sptbn1, spectrin beta, non-erythrocytic 1, [Score=83.2, Expect=5e-17]; ENSMUSG00000011751, Sptbn4, spectrin beta, non-erythrocytic 4, [Score=81.3, Expect=2e-16]} {Dmel: FBgn0250788, beta-Spec, beta Spectrin, [Score=190, Expect=1e-53]} {Celegans: WBGene00006803, unc-70, Spectrin beta chain, [Score=173, Expect=5e-48]} {Smed: dd_Smed_v6_1684_0_1, dd_Smed_v6_1684_0_1, [Score=222, Expect=5e-65]} {RNA1509_4180, RNA1509_48935} {RNA1310_25383, RNA1509_48935} {RNA1509_48935, RNA815_11411} |
Cumulative graph for MligTC455_19497
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.588 | 2.824 | 0.71927 | 1.00000 | |
| RegionR2 | 0.604 | 2.824 | 0.40807 | 0.80152 | |
| RegionR3 | -0.868 | 2.824 | 0.20166 | 0.74162 | |
| RegionR4 | 1.834 | 2.824 | 0.00694 | 0.04664 | |
| RegionR5 | -0.976 | 2.824 | 0.12303 | 0.35243 | |
| RegionR6 | -0.28 | 2.824 | 0.67694 | 1.00000 | |
| RegionR7 | 0.629 | 2.824 | 0.37469 | 1.00000 | |
| RegionR8 | -0.354 | 2.824 | 0.73593 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.955 | 2.824 | 0.25199 | 0.96682 | |
| RegenerationR2 | -0.932 | 2.824 | 0.13695 | 0.56484 | |
| RegenerationR3 | -0.375 | 2.824 | 0.62797 | 0.91942 | |
| RegenerationR4 | -1.605 | 2.824 | 0.02558 | 0.25672 | |
| RegenerationR5 | -1.089 | 2.824 | 0.14453 | 0.55959 | |
| RegenerationR6 | -0.773 | 2.824 | 0.31022 | 0.65831 | |
| RegenerationBL | -2.914 | 2.824 | 0.01731 | 0.14033 | |
| RegenerationTP | -0.828 | 2.824 | 0.38362 | 0.81785 |
Genes with expression patterns similar to MligTC455_19497
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_19497 | 211 | 4.4 | Mlig455_057208 | Neo: Germline Age: Up-Down-Down Region-enriched R4: 1.834/0.04664 |
SPTBN1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_057208 {REF} {Length: 2673} {Pfam: Pleckstrin homology domain [PF15410.8, score=69.7]; PH domain [PF00169.31, score=47.6]; Spectrin repeat [PF00435.23, score=43.2]} {Human: ENSG00000115306, SPTBN1, spectrin beta, non-erythrocytic 1, [Score=155, Expect=2e-41]} {Mouse: ENSMUSG00000021061, Sptb, spectrin beta, erythrocytic, [Score=83.6, Expect=4e-17]; ENSMUSG00000020315, Sptbn1, spectrin beta, non-erythrocytic 1, [Score=83.2, Expect=5e-17]; ENSMUSG00000011751, Sptbn4, spectrin beta, non-erythrocytic 4, [Score=81.3, Expect=2e-16]} {Dmel: FBgn0250788, beta-Spec, beta Spectrin, [Score=190, Expect=1e-53]} {Celegans: WBGene00006803, unc-70, Spectrin beta chain, [Score=173, Expect=5e-48]} {Smed: dd_Smed_v6_1684_0_1, dd_Smed_v6_1684_0_1, [Score=222, Expect=5e-65]} {RNA1509_4180, RNA1509_48935} {RNA1310_25383, RNA1509_48935} {RNA1509_48935, RNA815_11411} |
| 2. | MligTC455_42891 | 677 | 14.09 | Mlig455_055031, Mlig455_055048 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 2.875 Region-enriched R4: 1.977/0.00689 |
NOTCH1 | 1.804 | - | - | - | - | 0.830 | 0.974 | Mlig455_055031 {REF} {Length: 2484} {Pfam: Calcium-binding EGF domain [PF07645.17, score=81.4]; EGF-like domain [PF00008.29, score=68.4]; Human growth factor-like EGF [PF12661.9, score=42.0]; Delta serrate ligand [PF01414.21, score=35.1]; EGF-like domain [PF07974.15, score=21.7]; EGF domain [PF12947.9, score=19.5]} {Human: ENSG00000148400, NOTCH1, notch 1, [Score=134, Expect=6e-32]; ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=133, Expect=2e-31]} {Mouse: ENSMUSG00000028369, Svep1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=132, Expect=4e-31]; ENSMUSG00000036766, Dner, delta/notch-like EGF repeat containing, [Score=130, Expect=5e-31]; ENSMUSG00000027878, Notch2, notch 2, [Score=126, Expect=2e-29]} {Dmel: FBgn0004647, N, Notch, [Score=135, Expect=1e-32]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=117, Expect=6e-27]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=119, Expect=1e-27]} {RNA1509_36279} {RNA1310_12661} {RNA815_3995.1} Mlig455_055048 {REF} {Length: 2388} {Pfam: Calcium-binding EGF domain [PF07645.17, score=81.7]; EGF-like domain [PF00008.29, score=72.1]; Human growth factor-like EGF [PF12661.9, score=42.5]; Delta serrate ligand [PF01414.21, score=35.1]; EGF domain [PF12947.9, score=24.5]; EGF-like domain [PF07974.15, score=22.1]} {Human: ENSG00000148400, NOTCH1, notch 1, [Score=134, Expect=7e-32]; ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=133, Expect=1e-31]} {Mouse: ENSMUSG00000028369, Svep1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=131, Expect=4e-31]; ENSMUSG00000036766, Dner, delta/notch-like EGF repeat containing, [Score=129, Expect=7e-31]; ENSMUSG00000027878, Notch2, notch 2, [Score=125, Expect=2e-29]} {Dmel: FBgn0004647, N, Notch, [Score=135, Expect=1e-32]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=117, Expect=5e-27]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=119, Expect=9e-28]} {RNA1509_36279} {RNA1310_12661} {RNA815_3995.1} |
| 3. | MligTC455_33403 | 318 | 6.63 | Mlig455_045272 | Neo: - Age: - |
0.985 | - | - | 0.985 | - | - | - | Mlig455_045272 {REF} {Length: 6058} {Dmel: FBgn0030887, CG6867, [Score=52.0, Expect=4e-06]} {Celegans: WBGene00003169, mec-5, MEC-5, [Score=59.3, Expect=8e-09]} {Smed: dd_Smed_v6_10785_0_1, dd_Smed_v6_10785_0_1, [RH, Score=399, Expect=2e-115]} {RNA1509_32085} {RNA1310_4414.1} {RNA815_11897} | |
| 4. | MligTC455_27702 | 351 | 7.32 | Mlig455_015011 | Neo: Germline Age: - Region-specific R4: 4.546 Region-enriched R4: 3.035/0.00000 |
MRTFA | 0.965 | - | - | - | - | - | 0.965 | Mlig455_015011 {REF} {Length: 6690} {TRANSSPLICED} {Pfam: RPEL repeat [PF02755.17, score=45.7]; SAP domain [PF02037.29, score=24.7]} {Human: ENSG00000196588, MRTFA, myocardin related transcription factor A, [RH, Score=78.6, Expect=2e-14]} {Mouse: ENSMUSG00000042292, Mkl1, MKL (megakaryoblastic leukemia)/myocardin-like 1, [RH, Score=79.0, Expect=1e-14]} {Dmel: FBgn0052296, Mrtf, Myocardin-related transcription factor, [RH, Score=80.1, Expect=4e-15]} {Smed: dd_Smed_v6_8558_0_1, dd_Smed_v6_8558_0_1, [RH, Score=51.2, Expect=2e-06]} {RNA1509_6119} {RNA1310_5482} {RNA815_7669.1} |