Data search
Results for MligTC455_19518
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_19518 | 2886 | 60.13 | Mlig455_063743 | Neo: - Age: Down-Down-Up Region-enriched R4: 1.622/0.02750 |
Mlig455_063743 {REF} {Length: 2072} {RNA1509_40614} {RNA1310_47807} {RNA815_25820.1} |
Cumulative graph for MligTC455_19518
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.55 | 6.12 | 0.01395 | 0.33275 | |
| RegionR2 | 0.348 | 6.12 | 0.53932 | 0.90823 | |
| RegionR3 | 0.734 | 6.12 | 0.12315 | 0.60559 | |
| RegionR4 | 1.622 | 6.12 | 0.00350 | 0.02750 | |
| RegionR5 | 0.594 | 6.12 | 0.21652 | 0.51615 | |
| RegionR6 | 0.76 | 6.12 | 0.11262 | 0.61319 | |
| RegionR7 | 0.106 | 6.12 | 0.83084 | 1.00000 | |
| RegionR8 | -1.614 | 6.12 | 0.01585 | 0.24505 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -7.795 | 6.12 | 0.03884 | 0.66085 | |
| RegenerationR2 | 0.377 | 6.12 | 0.50614 | 0.87387 | |
| RegenerationR3 | 0.426 | 6.12 | 0.46686 | 0.84187 | |
| RegenerationR4 | 0.254 | 6.12 | 0.67894 | 0.94545 | |
| RegenerationR5 | 0.658 | 6.12 | 0.25944 | 0.69103 | |
| RegenerationR6 | 0.112 | 6.12 | 0.85039 | 1.00000 | |
| RegenerationBL | 0.187 | 6.12 | 0.72592 | 1.00000 | |
| RegenerationTP | -0.118 | 6.12 | 0.85001 | 1.00000 |
Genes with expression patterns similar to MligTC455_19518
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_19518 | 2886 | 60.13 | Mlig455_063743 | Neo: - Age: Down-Down-Up Region-enriched R4: 1.622/0.02750 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_063743 {REF} {Length: 2072} {RNA1509_40614} {RNA1310_47807} {RNA815_25820.1} | |
| 2. | MligTC455_42890 | 236 | 4.91 | Mlig455_022504 | Neo: - Age: logFC(26M/2M)=-0.269 Region-enriched R4: 2.592/0.03886 |
NOTCH1 | 1.685 | - | - | - | 0.955 | 0.730 | - | Mlig455_022504 {REF} {Length: 3820} {Pfam: Calcium-binding EGF domain [PF07645.17, score=77.2]; EGF-like domain [PF00008.29, score=65.8]; Delta serrate ligand [PF01414.21, score=41.8]; Human growth factor-like EGF [PF12661.9, score=38.5]; EGF-like domain [PF07974.15, score=26.9]; EGF domain [PF12947.9, score=23.0]} {Human: ENSG00000148400, NOTCH1, notch 1, [Score=134, Expect=6e-32]; ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=132, Expect=2e-31]} {Mouse: ENSMUSG00000026923, Notch1, notch 1, [Score=130, Expect=5e-31]; ENSMUSG00000014773, Dll1, delta like canonical Notch ligand 1, [Score=129, Expect=6e-31]; ENSMUSG00000036766, Dner, delta/notch-like EGF repeat containing, [Score=127, Expect=3e-30]; ENSMUSG00000028369, Svep1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=126, Expect=1e-29]; ENSMUSG00000027878, Notch2, notch 2, [Score=125, Expect=3e-29]} {Dmel: FBgn0004647, N, Notch, [Score=134, Expect=3e-32]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=119, Expect=2e-27]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=119, Expect=7e-28]} {RNA1509_36279} {RNA1310_12661} {RNA815_3995.1} |
| 3. | MligTC455_20521 | 3579 | 74.55 | Mlig455_000075 | Neo: - Age: - Regeneration-upregulated BL: 1.131 Regeneration-enriched BL: 1.131 |
PCK2 | 0.969 | - | - | - | - | - | 0.969 | Mlig455_000075 {REF} {Length: 2377} {Pfam: Phosphoenolpyruvate carboxykinase C-terminal P-loop domain [PF00821.20, score=553.7]; Phosphoenolpyruvate carboxykinase N-terminal domain [PF17297.4, score=250.6]} {Human: ENSG00000100889, PCK2, phosphoenolpyruvate carboxykinase 2, mitochondrial, [Score=804, Expect=0.0]; ENSG00000285241, PCK2, phosphoenolpyruvate carboxykinase 2, mitochondrial, [Score=804, Expect=0.0]; ENSG00000124253, PCK1, phosphoenolpyruvate carboxykinase 1, [Score=787, Expect=0.0]} {Mouse: ENSMUSG00000040618, Pck2, phosphoenolpyruvate carboxykinase 2 (mitochondrial), [Score=796, Expect=0.0]; ENSMUSG00000027513, Pck1, phosphoenolpyruvate carboxykinase 1, cytosolic, [Score=795, Expect=0.0]} {Dmel: FBgn0003067, Pepck, Phosphoenolpyruvate carboxykinase, [Score=787, Expect=0.0]} {Celegans: WBGene00011232, pck-2, Phosphoenolypyruvate CarboxyKinase, [Score=671, Expect=0.0]} {Smed: dd_Smed_v6_536_0_1, dd_Smed_v6_536_0_1, [Score=762, Expect=0.0]} {RNA1509_12530} {RNA1310_2907} {RNA815_2921.1} |
| 4. | MligTC455_20522 | 3327 | 69.32 | Mlig455_063742 | Neo: - Age: logFC(26M/2M)=0.198 Regeneration-upregulated BL: 1.122 Regeneration-enriched BL: 1.122 |
PCK2 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_063742 {REF} {Length: 2607} {Pfam: Phosphoenolpyruvate carboxykinase C-terminal P-loop domain [PF00821.20, score=553.6]; Phosphoenolpyruvate carboxykinase N-terminal domain [PF17297.4, score=306.7]} {Human: ENSG00000100889, PCK2, phosphoenolpyruvate carboxykinase 2, mitochondrial, [RH, Score=862, Expect=0.0]; ENSG00000285241, PCK2, phosphoenolpyruvate carboxykinase 2, mitochondrial, [RH, Score=862, Expect=0.0]; ENSG00000124253, PCK1, phosphoenolpyruvate carboxykinase 1, [RH, Score=847, Expect=0.0]} {Mouse: ENSMUSG00000040618, Pck2, phosphoenolpyruvate carboxykinase 2 (mitochondrial), [RH, Score=853, Expect=0.0]; ENSMUSG00000027513, Pck1, phosphoenolpyruvate carboxykinase 1, cytosolic, [RH, Score=853, Expect=0.0]} {Dmel: FBgn0034356, CG10924, [RH, Score=827, Expect=0.0]} {Celegans: WBGene00011232, pck-2, Phosphoenolypyruvate CarboxyKinase, [Score=722, Expect=0.0]} {Smed: dd_Smed_v6_6169_0_1, dd_Smed_v6_6169_0_1, [RH, Score=816, Expect=0.0]} {RNA1509_10551, RNA1509_12530, RNA1509_13603, RNA1509_16652, RNA1509_18778, RNA1509_2583, RNA1509_34776, RNA1509_37676, RNA1509_44269} {RNA1310_2907, RNA1509_10551, RNA1509_12530, RNA1509_13603, RNA1509_16652, RNA1509_18778, RNA1509_2583, RNA1509_34776, RNA1509_37676, RNA1509_44269} {RNA1509_10551, RNA1509_12530, RNA1509_13603, RNA1509_16652, RNA1509_18778, RNA1509_2583, RNA1509_34776, RNA1509_37676, RNA1509_44269, RNA815_2921.1} |
| 5. | MligTC455_45812 | 3799 | 79.15 | Mlig455_003940, Mlig455_003957 | Neo: - Age: logFC(26M/2M)=-0.258 |
SLC25A36 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_003940 {REF} {Length: 2501} {Pfam: Mitochondrial carrier protein [PF00153.29, score=206.9]} {Human: ENSG00000114120, SLC25A36, solute carrier family 25 member 36, [RH, Score=261, Expect=3e-85]} {Mouse: ENSMUSG00000032449, Slc25a36, solute carrier family 25, member 36, [RH, Score=259, Expect=2e-84]} {Dmel: FBgn0031359, Rim2, Replication in mitochondria 2, [RH, Score=251, Expect=1e-80]} {Celegans: WBGene00011662, T09F3.2, Carrier protein (C2), [RH, Score=169, Expect=5e-49]} {Smed: dd_Smed_v6_8768_0_1, dd_Smed_v6_8768_0_1, [Score=222, Expect=4e-70]} {RNA1509_2941, RNA1509_29957, RNA1509_59949} {RNA1310_8533.1, RNA1509_2941, RNA1509_29957, RNA1509_59949} {RNA1509_2941, RNA1509_29957, RNA1509_59949, RNA815_2972.1} Mlig455_003957 {REF} {Length: 2419} {Pfam: Mitochondrial carrier protein [PF00153.29, score=207.5]} {Human: ENSG00000114120, SLC25A36, solute carrier family 25 member 36, [RH, Score=261, Expect=5e-85]} {Mouse: ENSMUSG00000032449, Slc25a36, solute carrier family 25, member 36, [RH, Score=258, Expect=4e-84]} {Dmel: FBgn0031359, Rim2, Replication in mitochondria 2, [RH, Score=250, Expect=2e-80]} {Celegans: WBGene00011662, T09F3.2, Carrier protein (C2), [RH, Score=169, Expect=4e-49]} {Smed: dd_Smed_v6_8768_0_1, dd_Smed_v6_8768_0_1, [Score=222, Expect=5e-70]} {RNA1509_2941} {RNA1310_8533.1} {RNA815_2972.1} |
Berezikov Lab - 2020-2021 © ERIBA