TomoSeq data search

Data search

Results for MligTC455_19564

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_19564	134	2.80	Mlig455_042243	Neo: - Age: -	RIMBP3C	Mlig455_042243 {REF} {Length: 4039} {Pfam: Variant SH3 domain [PF07653.19, score=26.2]} {Human: ENSG00000183246, RIMBP3C, RIMS binding protein 3C, [Score=53.9, Expect=1e-06]; ENSG00000275793, RIMBP3, RIMS binding protein 3, [Score=53.9, Expect=1e-06]; ENSG00000274600, RIMBP3B, RIMS binding protein 3B, [Score=53.9, Expect=1e-06]} {Mouse: ENSMUSG00000071636, Rimbp3, RIMS binding protein 3, [Score=53.5, Expect=1e-06]} {Smed: dd_Smed_v6_14584_0_1, dd_Smed_v6_14584_0_1, [Score=147, Expect=4e-37]} {RNA1509_31987, RNA1509_44177} {RNA1310_3515.1, RNA1509_44177} {RNA1509_44177, RNA815_8407}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_19564

134

2.80

Mlig455_042243

Neo: -

Age: -

RIMBP3C

Mlig455_042243 {REF} {Length: 4039} {Pfam: Variant SH3 domain [PF07653.19, score=26.2]} {Human: ENSG00000183246, RIMBP3C, RIMS binding protein 3C, [Score=53.9, Expect=1e-06]; ENSG00000275793, RIMBP3, RIMS binding protein 3, [Score=53.9, Expect=1e-06]; ENSG00000274600, RIMBP3B, RIMS binding protein 3B, [Score=53.9, Expect=1e-06]} {Mouse: ENSMUSG00000071636, Rimbp3, RIMS binding protein 3, [Score=53.5, Expect=1e-06]} {Smed: dd_Smed_v6_14584_0_1, dd_Smed_v6_14584_0_1, [Score=147, Expect=4e-37]} {RNA1509_31987, RNA1509_44177} {RNA1310_3515.1, RNA1509_44177} {RNA1509_44177, RNA815_8407}

Cumulative graph for MligTC455_19564

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	2.062	2.108	0.27513	0.92572
RegionR2	-0.67	2.108	0.47828	0.86268
RegionR3	-2.142	2.108	0.01359	0.18585
RegionR4	-1.184	2.108	0.20639	0.48898
RegionR5	-1.965	2.108	0.01016	0.05842
RegionR6	0.59	2.108	0.36729	0.94863
RegionR7	2.093	2.108	0.00640	0.13001
RegionR8	1.216	2.108	0.31518	0.94781

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-6.777	2.108	0.17183	0.91574
RegenerationR2	0.918	2.108	0.18302	0.62566
RegenerationR3	1.93	2.108	0.04648	0.37584
RegenerationR4	0.447	2.108	0.60696	0.91609
RegenerationR5	1.92	2.108	0.02081	0.25004
RegenerationR6	-0.569	2.108	0.45820	0.77622
RegenerationBL	-1.712	2.108	0.10522	0.38294
RegenerationTP	-1.614	2.108	0.12788	0.54017

Genes with expression patterns similar to MligTC455_19564

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_19564	134	2.8	Mlig455_042243	Neo: - Age: -	RIMBP3C	5	1.000	-	1.000	1.000	1.000	1.000	Mlig455_042243 {REF} {Length: 4039} {Pfam: Variant SH3 domain [PF07653.19, score=26.2]} {Human: ENSG00000183246, RIMBP3C, RIMS binding protein 3C, [Score=53.9, Expect=1e-06]; ENSG00000275793, RIMBP3, RIMS binding protein 3, [Score=53.9, Expect=1e-06]; ENSG00000274600, RIMBP3B, RIMS binding protein 3B, [Score=53.9, Expect=1e-06]} {Mouse: ENSMUSG00000071636, Rimbp3, RIMS binding protein 3, [Score=53.5, Expect=1e-06]} {Smed: dd_Smed_v6_14584_0_1, dd_Smed_v6_14584_0_1, [Score=147, Expect=4e-37]} {RNA1509_31987, RNA1509_44177} {RNA1310_3515.1, RNA1509_44177} {RNA1509_44177, RNA815_8407}
2.	MligTC455_24556	26	0.55	Mlig455_037624	Neo: Irradiation Age: Up-Down-Down		0.959	-	-	0.959	-	-	-	Mlig455_037624 {REF} {Length: 4728} {RNA1509_20301} {RNA1310_3545.1} {RNA815_47482}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts