M. lignano Tomo-Seq
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Results for MligTC455_19613

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_19613 6773 141.10 Mlig455_019218, Mlig455_035562, Mlig455_035583

Neo: -

Age: -

Mlig455_019218 {REF} {Length: 1677} {Pfam: Sap, sulfolipid-1-addressing protein [PF11139.10, score=20.0]} {Smed: dd_Smed_v6_2739_0_1, dd_Smed_v6_2739_0_1, [RH, Score=128, Expect=7e-36]} {RNA1509_12291} {RNA1310_18238} {RNA815_7589}

Mlig455_035562 {REF} {Length: 1635} {Pfam: Sap, sulfolipid-1-addressing protein [PF11139.10, score=20.9]} {Smed: dd_Smed_v6_5091_0_1, dd_Smed_v6_5091_0_1, [Score=137, Expect=4e-39]} {RNA1509_32793} {RNA1310_19066, RNA1509_32793} {RNA1509_32793, RNA815_7589}

Mlig455_035583 {REF} {Length: 1636} {Pfam: Sap, sulfolipid-1-addressing protein [PF11139.10, score=20.9]} {Smed: dd_Smed_v6_5091_0_1, dd_Smed_v6_5091_0_1, [Score=137, Expect=4e-39]} {RNA1509_36263} {RNA1310_19066, RNA1509_36263} {RNA1509_36263, RNA815_7589}

Cumulative graph for MligTC455_19613

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.085 7.183 0.82399 1.00000
RegionR2 -0.419 7.183 0.09782 0.38433
RegionR3 0.009 7.183 0.96552 1.00000
RegionR4 0.337 7.183 0.17259 0.43732
RegionR5 -0.008 7.183 0.97032 1.00000
RegionR6 0.349 7.183 0.10278 0.58840
RegionR7 -0.147 7.183 0.54706 1.00000
RegionR8 -0.207 7.183 0.46115 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.793 7.183 0.00232 0.25192
RegenerationR2 -0.102 7.183 0.70186 0.95711
RegenerationR3 -0.033 7.183 0.90477 1.00000
RegenerationR4 -0.015 7.183 0.95778 1.00000
RegenerationR5 0.239 7.183 0.36789 0.77861
RegenerationR6 -0.013 7.183 0.96083 1.00000
RegenerationBL 0.533 7.183 0.02869 0.18827
RegenerationTP -0.004 7.183 0.99004 1.00000


Genes with expression patterns similar to MligTC455_19613

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_19613 6773 141.1 Mlig455_019218, Mlig455_035562, Mlig455_035583

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_019218 {REF} {Length: 1677} {Pfam: Sap, sulfolipid-1-addressing protein [PF11139.10, score=20.0]} {Smed: dd_Smed_v6_2739_0_1, dd_Smed_v6_2739_0_1, [RH, Score=128, Expect=7e-36]} {RNA1509_12291} {RNA1310_18238} {RNA815_7589}

Mlig455_035562 {REF} {Length: 1635} {Pfam: Sap, sulfolipid-1-addressing protein [PF11139.10, score=20.9]} {Smed: dd_Smed_v6_5091_0_1, dd_Smed_v6_5091_0_1, [Score=137, Expect=4e-39]} {RNA1509_32793} {RNA1310_19066, RNA1509_32793} {RNA1509_32793, RNA815_7589}

Mlig455_035583 {REF} {Length: 1636} {Pfam: Sap, sulfolipid-1-addressing protein [PF11139.10, score=20.9]} {Smed: dd_Smed_v6_5091_0_1, dd_Smed_v6_5091_0_1, [Score=137, Expect=4e-39]} {RNA1509_36263} {RNA1310_19066, RNA1509_36263} {RNA1509_36263, RNA815_7589}
2. MligTC455_40925 203 4.22 Mlig455_015022, Mlig455_038428, Mlig455_038634

Neo: -

Age: -

 LHFPL6 0.959 - - - 0.959 - -

Mlig455_015022 {REF} {Length: 3308} {Pfam: Lipoma HMGIC fusion partner-like protein [PF10242.11, score=86.9]} {Human: ENSG00000183722, LHFPL6, LHFPL tetraspan subfamily member 6, [Score=63.5, Expect=3e-11]} {Smed: dd_Smed_v6_6182_0_1, dd_Smed_v6_6182_0_1, [RH, Score=190, Expect=2e-58]} {RNA1310_26278} {RNA815_35631}

Mlig455_038428 {REF} {Length: 2384} {Pfam: Lipoma HMGIC fusion partner-like protein [PF10242.11, score=86.9]} {Human: ENSG00000183722, LHFPL6, LHFPL tetraspan subfamily member 6, [Score=63.5, Expect=3e-11]} {Smed: dd_Smed_v6_6182_0_1, dd_Smed_v6_6182_0_1, [RH, Score=190, Expect=2e-58]} {RNA1310_26278} {RNA815_35631}

Mlig455_038634 {REF} {Length: 2810} {Pfam: Lipoma HMGIC fusion partner-like protein [PF10242.11, score=86.9]} {Human: ENSG00000183722, LHFPL6, LHFPL tetraspan subfamily member 6, [Score=63.5, Expect=3e-11]} {Smed: dd_Smed_v6_6182_0_1, dd_Smed_v6_6182_0_1, [RH, Score=191, Expect=1e-58]} {RNA1310_26278} {RNA815_35631}
3. MligTC455_43436 111 2.32 Mlig455_009962

Neo: -

Age: -

Region-enriched R5: 2.669/0.01112

 ATP23 0.954 - - - 0.954 - - Mlig455_009962 {REF} {Length: 1513} {TRANSSPLICED} {Pfam: Peptidase M76 family [PF09768.11, score=108.8]} {Human: ENSG00000166896, ATP23, ATP23 metallopeptidase and ATP synthase assembly factor homolog, [RH, Score=120, Expect=5e-33]; ENSG00000262145, ATP23, ATP23 metallopeptidase and ATP synthase assembly factor homolog, [RH, Score=120, Expect=5e-33]} {Mouse: ENSMUSG00000025436, Atp23, ATP23 metallopeptidase and ATP synthase assembly factor homolog, [Score=120, Expect=3e-33]} {Dmel: FBgn0032644, CG5131, [Score=138, Expect=1e-39]} {Smed: dd_Smed_v6_7262_0_1, dd_Smed_v6_7262_0_1, [Score=137, Expect=1e-39]} {RNA1509_21130} {RNA1310_21043, RNA1509_21130} {RNA1509_21130, RNA815_8650}
4. MligTC455_05622 661 13.77 Mlig455_022610, Mlig455_063633

Neo: -

Age: -

Region-enriched R5: 1.393/0.01070

 MTRR 0.95 - - - 0.950 - -

Mlig455_022610 {REF} {Length: 3064} {TRANSSPLICED} {Pfam: FAD binding domain [PF00667.22, score=111.3]; Flavodoxin [PF00258.27, score=78.5]; Oxidoreductase NAD-binding domain [PF00175.23, score=36.5]; Flavodoxin domain [PF12724.9, score=23.7]} {Human: ENSG00000124275, MTRR, 5-methyltetrahydrofolate-homocysteine methyltransferase reductase, [RH, Score=279, Expect=3e-83]} {Mouse: ENSMUSG00000034617, Mtrr, 5-methyltetrahydrofolate-homocysteine methyltransferase reductase, [RH, Score=285, Expect=6e-86]} {Dmel: FBgn0015623, Cpr, Cytochrome P450 reductase, [Score=143, Expect=2e-35]} {Celegans: WBGene00006510, mtrr-1, Putative methionine synthase reductase, [RH, Score=249, Expect=8e-73]} {Smed: dd_Smed_v6_3947_0_1, dd_Smed_v6_3947_0_1, [RH, Score=315, Expect=6e-98]} {RNA1509_30683} {RNA1310_10032.1} {RNA815_3421.1}

Mlig455_063633 {REF} {Length: 3360} {TRANSSPLICED} {Pfam: FAD binding domain [PF00667.22, score=111.3]; Flavodoxin [PF00258.27, score=78.5]; Oxidoreductase NAD-binding domain [PF00175.23, score=36.2]; Flavodoxin domain [PF12724.9, score=23.8]} {Human: ENSG00000124275, MTRR, 5-methyltetrahydrofolate-homocysteine methyltransferase reductase, [RH, Score=280, Expect=1e-83]} {Mouse: ENSMUSG00000034617, Mtrr, 5-methyltetrahydrofolate-homocysteine methyltransferase reductase, [RH, Score=284, Expect=2e-85]} {Dmel: FBgn0015623, Cpr, Cytochrome P450 reductase, [Score=142, Expect=2e-35]} {Celegans: WBGene00006510, mtrr-1, Putative methionine synthase reductase, [RH, Score=253, Expect=4e-74]} {Smed: dd_Smed_v6_3947_0_1, dd_Smed_v6_3947_0_1, [RH, Score=317, Expect=2e-98]} {RNA1509_30683, RNA1509_52263} {RNA1310_10032.1, RNA1509_30683, RNA1509_52263} {RNA1509_30683, RNA1509_52263, RNA815_3421.1}

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