Data search
Results for MligTC455_19627
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_19627 | 304 | 6.34 | Mlig455_020196 | Neo: - Age: - |
Mlig455_020196 {REF} {Length: 2104} {TRANSSPLICED} {RNA1509_28813, RNA1509_54366} {RNA1310_33459, RNA1509_28813, RNA1509_54366} {RNA1509_28813, RNA1509_54366, RNA815_12744} |
Cumulative graph for MligTC455_19627
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.693 | 3.271 | 0.17749 | 0.80486 | |
| RegionR2 | 0.564 | 3.271 | 0.54984 | 0.91551 | |
| RegionR3 | 0.842 | 3.271 | 0.29573 | 0.83763 | |
| RegionR4 | 1.24 | 3.271 | 0.13228 | 0.36880 | |
| RegionR5 | 0.678 | 3.271 | 0.40589 | 0.76412 | |
| RegionR6 | 0.456 | 3.271 | 0.60273 | 1.00000 | |
| RegionR7 | 1.524 | 3.271 | 0.06660 | 0.49596 | |
| RegionR8 | 0.389 | 3.271 | 0.70619 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.302 | 3.271 | 0.99994 | 1.00000 | |
| RegenerationR2 | 0.294 | 3.271 | 0.49547 | 0.86962 | |
| RegenerationR3 | -0.769 | 3.271 | 0.12109 | 0.54009 | |
| RegenerationR4 | -1.133 | 3.271 | 0.02243 | 0.23924 | |
| RegenerationR5 | -0.473 | 3.271 | 0.27636 | 0.70539 | |
| RegenerationR6 | -0.056 | 3.271 | 0.91162 | 1.00000 | |
| RegenerationBL | -0.632 | 3.271 | 0.39458 | 0.76321 | |
| RegenerationTP | 0.012 | 3.271 | 0.98819 | 1.00000 |
Genes with expression patterns similar to MligTC455_19627
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_19627 | 304 | 6.34 | Mlig455_020196 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_020196 {REF} {Length: 2104} {TRANSSPLICED} {RNA1509_28813, RNA1509_54366} {RNA1310_33459, RNA1509_28813, RNA1509_54366} {RNA1509_28813, RNA1509_54366, RNA815_12744} | |
| 2. | MligTC455_44726 | 315 | 6.57 | Mlig455_010903 | Neo: - Age: - |
CLCN3 | 1.677 | - | - | - | - | 0.724 | 0.953 | Mlig455_010903 {REF} {Length: 3753} {Pfam: Voltage gated chloride channel [PF00654.22, score=265.7]; CBS domain [PF00571.30, score=45.5]} {Human: ENSG00000109572, CLCN3, chloride voltage-gated channel 3, [Score=695, Expect=0.0]; ENSG00000073464, CLCN4, chloride voltage-gated channel 4, [Score=679, Expect=0.0]; ENSG00000171365, CLCN5, chloride voltage-gated channel 5, [Score=662, Expect=0.0]} {Mouse: ENSMUSG00000004319, Clcn3, chloride channel, voltage-sensitive 3, [Score=696, Expect=0.0]; ENSMUSG00000000605, Clcn4, chloride channel, voltage-sensitive 4, [Score=677, Expect=0.0]} {Dmel: FBgn0036566, ClC-c, Chloride channel-c, [Score=690, Expect=0.0]} {Celegans: WBGene00000532, clh-5, Chloride channel protein, [Score=588, Expect=0.0]} {Smed: dd_Smed_v6_4076_1_1, dd_Smed_v6_4076_1_1, [Score=642, Expect=0.0]} {RNA1509_27287} {RNA1310_201.2} {RNA815_18093} |
| 3. | MligTC455_53075 | 169 | 3.52 | Mlig455_032794 | Neo: - Age: - Region-enriched R8: 4.022/0.00674 Regeneration-downregulated BL: -7.797 Regeneration-depleted BL: -7.797 |
NTN1 | 0.972 | - | - | - | 0.972 | - | - | Mlig455_032794 {REF} {Length: 1705} {Pfam: Laminin EGF domain [PF00053.26, score=66.0]} {Human: ENSG00000065320, NTN1, netrin 1, [Score=125, Expect=4e-31]; ENSG00000162068, NTN3, netrin 3, [Score=120, Expect=9e-30]} {Mouse: ENSMUSG00000020902, Ntn1, netrin 1, [Score=123, Expect=9e-31]; ENSMUSG00000117406, Ntn3, netrin 3, [Score=119, Expect=2e-29]; ENSMUSG00000070564, Ntn5, netrin 5, [Score=118, Expect=8e-30]} {Dmel: FBgn0015774, NetB, Netrin-B, [Score=123, Expect=8e-31]} {Celegans: WBGene00006746, unc-6, Netrin unc-6, [Score=117, Expect=1e-28]} {Smed: dd_Smed_v6_9795_0_1, dd_Smed_v6_9795_0_1, [Score=127, Expect=2e-32]} {RNA1310_21656} {RNA815_31734} |
| 4. | MligTC455_45523 | 528 | 11 | Mlig455_063535 | Neo: - Age: Up-Down-Down |
DCAF6 | 0.97 | - | - | - | - | - | 0.970 | Mlig455_063535 {REF} {Length: 3252} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=57.5]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=24.9]} {Human: ENSG00000143164, DCAF6, DDB1 and CUL4 associated factor 6, [RH, Score=174, Expect=2e-45]} {Mouse: ENSMUSG00000026571, Dcaf6, DDB1 and CUL4 associated factor 6, [RH, Score=177, Expect=1e-46]} {Dmel: FBgn0000057, adp, adipose, [Score=105, Expect=1e-23]} {Celegans: WBGene00044440, adpr-1, ADiPose (Drosophila obesity gene) Related, [Score=77.4, Expect=1e-14]} {Smed: dd_Smed_v6_5540_0_1, dd_Smed_v6_5540_0_1, [Score=110, Expect=4e-25]} {RNA1509_11637} {RNA1310_10014.2} {RNA815_7894.1} |
| 5. | MligTC455_45684 | 114 | 2.38 | Mlig455_016688 | Neo: - Age: - |
KCNIP4 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_016688 {REF} {Length: 3071} {Pfam: EF-hand domain pair [PF13499.8, score=63.0]; EF hand [PF00036.34, score=59.2]; EF-hand domain [PF13405.8, score=50.6]; EF hand [PF13202.8, score=46.9]; EF-hand domain pair [PF13833.8, score=40.3]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=19.5]} {Human: ENSG00000185774, KCNIP4, potassium voltage-gated channel interacting protein 4, [RH, Score=205, Expect=7e-66]; ENSG00000120049, KCNIP2, potassium voltage-gated channel interacting protein 2, [RH, Score=198, Expect=9e-63]} {Mouse: ENSMUSG00000029088, Kcnip4, Kv channel interacting protein 4, [RH, Score=205, Expect=5e-66]; ENSMUSG00000025221, Kcnip2, Kv channel-interacting protein 2, [RH, Score=196, Expect=2e-62]} {Dmel: FBgn0265595, CG44422, [RH, Score=172, Expect=7e-51]} {Celegans: WBGene00003563, ncs-1, Neuronal calcium sensor 1, [Score=146, Expect=2e-43]} {Smed: dd_Smed_v6_9434_0_1, dd_Smed_v6_9434_0_1, [RH, Score=175, Expect=1e-54]} {RNA1509_44439} {RNA1310_26774} {RNA815_23603} |
| 6. | MligTC455_19779 | 1025 | 21.35 | Mlig455_043571 | Neo: - Age: - |
ARIH2 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_043571 {REF} {Length: 3995} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=60.2]; Ariadne domain [PF19422.1, score=44.2]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=20.8]; zinc-RING finger domain [PF14634.8, score=19.4]; RING-type zinc-finger [PF13445.8, score=18.7]} {Human: ENSG00000177479, ARIH2, ariadne RBR E3 ubiquitin protein ligase 2, [RH, Score=430, Expect=5e-146]} {Mouse: ENSMUSG00000064145, Arih2, ariadne RBR E3 ubiquitin protein ligase 2, [RH, Score=428, Expect=2e-145]} {Dmel: FBgn0025186, ari-2, ariadne 2, [RH, Score=470, Expect=6e-162]} {Celegans: WBGene00020462, T12E12.1, Potential E3 ubiquitin-protein ligase ariadne-2, [RH, Score=405, Expect=3e-137]} {Smed: dd_Smed_v6_7986_0_1, dd_Smed_v6_7986_0_1, [RH, Score=423, Expect=1e-143]} {RNA1509_31356, RNA1509_4785} {RNA1310_15084, RNA1509_31356} {RNA1509_31356, RNA815_5803} |
| 7. | MligTC455_50633 | 125 | 2.61 | Mlig455_005638 | Neo: - Age: - |
ENKD1 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_005638 {REF} {Length: 2679} {TRANSSPLICED} {Pfam: Calmodulin-binding [PF13864.8, score=72.6]} {Human: ENSG00000124074, ENKD1, enkurin domain containing 1, [RH, Score=120, Expect=2e-30]} {Mouse: ENSMUSG00000013155, Enkd1, enkurin domain containing 1, [RH, Score=117, Expect=6e-30]} {Dmel: FBgn0033174, CG11125, [RH, Score=70.5, Expect=3e-13]} {Smed: dd_Smed_v6_12339_0_1, dd_Smed_v6_12339_0_1, [RH, Score=177, Expect=1e-52]} {RNA1509_21917} {RNA1310_12437.2} {RNA815_12111} |
| 8. | MligTC455_52201 | 712 | 14.84 | Mlig455_000379 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 3.455 Region-enriched R4: 2.637/0.00000 Regeneration-downregulated R4: -1.839 Regeneration-depleted R4: -1.839 |
CHEK2 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_000379 {REF} {Length: 2826} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=205.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=111.0]; FHA domain [PF00498.28, score=45.6]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=25.5]; Kinase-like [PF14531.8, score=19.4]; ABC1 atypical kinase-like domain [PF03109.18, score=19.2]} {Human: ENSG00000183765, CHEK2, checkpoint kinase 2, [Score=231, Expect=1e-67]} {Mouse: ENSMUSG00000029521, Chek2, checkpoint kinase 2, [Score=226, Expect=7e-66]} {Dmel: FBgn0019686, lok, loki, [Score=219, Expect=3e-64]} {Celegans: WBGene00000499, chk-2, Serine/threonine-protein kinase chk-2, [Score=174, Expect=1e-47]} {Smed: dd_Smed_v6_6620_0_1, dd_Smed_v6_6620_0_1, [Score=234, Expect=2e-70]} {RNA1509_3579} {RNA1310_6215, RNA1509_3579} {RNA1509_3579, RNA815_2071.1} |
| 9. | MligTC455_19659 | 324 | 6.74 | Mlig455_051975 | Neo: - Age: Down-Up-Up |
ENDOG | 0.952 | - | - | - | - | - | 0.952 | Mlig455_051975 {REF} {Length: 5888} {TRANSSPLICED} {Pfam: DNA/RNA non-specific endonuclease [PF01223.25, score=176.8]} {Human: ENSG00000167136, ENDOG, endonuclease G, [RH, Score=204, Expect=8e-64]} {Mouse: ENSMUSG00000015337, Endog, endonuclease G, [RH, Score=207, Expect=3e-65]} {Dmel: FBgn0033690, EndoG, Endonuclease G, [RH, Score=247, Expect=1e-80]} {Celegans: WBGene00000787, cps-6, Endonuclease G, mitochondrial, [RH, Score=208, Expect=2e-65]} {Smed: dd_Smed_v6_14758_0_1, dd_Smed_v6_14758_0_1, [RH, Score=222, Expect=2e-71]} {RNA1509_48918} {RNA1310_33978, RNA1509_48918} {RNA1509_48918, RNA815_16080} |
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