TomoSeq data search

Data search

Results for MligTC455_19631

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_19631	150	3.13	Mlig455_026597	Neo: - Age: Down-Up-Up		Mlig455_026597 {REF} {Length: 600} {NoTransDecoderORF} {RNA1509_32813} {RNA1310_51673} {RNA815_25910}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_19631

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.483	2.392	0.78197	1.00000
RegionR2	-0.26	2.392	0.74734	1.00000
RegionR3	0.292	2.392	0.58589	1.00000
RegionR4	-0.079	2.392	0.90862	1.00000
RegionR5	-0.001	2.392	0.99432	1.00000
RegionR6	0.113	2.392	0.84957	1.00000
RegionR7	0.662	2.392	0.36844	1.00000
RegionR8	-0.244	2.392	0.82333	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-3.818	2.392	0.53816	1.00000
RegenerationR2	0.99	2.392	0.13855	0.56726
RegenerationR3	0.616	2.392	0.33159	0.75742
RegenerationR4	0.084	2.392	0.89094	1.00000
RegenerationR5	0.475	2.392	0.40180	0.80037
RegenerationR6	0.1	2.392	0.88917	1.00000
RegenerationBL	0.388	2.392	0.69319	1.00000
RegenerationTP	-2.724	2.392	0.08092	0.45190

Genes with expression patterns similar to MligTC455_19631

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_19631	150	3.13	Mlig455_026597	Neo: - Age: Down-Up-Up		5	1.000	1.000	-	1.000	1.000	1.000	Mlig455_026597 {REF} {Length: 600} {NoTransDecoderORF} {RNA1509_32813} {RNA1310_51673} {RNA815_25910}
2.	MligTC455_12797	59	1.23	Mlig455_049659	Neo: - Age: -	PCDHA5	0.957	-	-	-	0.957	-	-	Mlig455_049659 {REF} {Length: 4667} {Pfam: Cadherin domain [PF00028.19, score=196.7]; Cadherin-like [PF16184.7, score=28.8]; Cadherin-like [PF08266.14, score=24.3]} {Human: ENSG00000204965, PCDHA5, protocadherin alpha 5, [Score=174, Expect=5e-44]; ENSG00000253846, PCDHGA10, protocadherin gamma subfamily A, 10, [Score=169, Expect=3e-42]; ENSG00000165194, PCDH19, protocadherin 19, [Score=166, Expect=4e-41]} {Mouse: ENSMUSG00000055421, Pcdh9, protocadherin 9, [Score=176, Expect=2e-44]; ENSMUSG00000102697, Pcdhac2, protocadherin alpha subfamily C, 2, [Score=169, Expect=3e-42]} {Dmel: FBgn0284247, ds, dachsous, [Score=182, Expect=5e-46]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=154, Expect=2e-37]} {Smed: dd_Smed_v6_12697_0_1, dd_Smed_v6_12697_0_1, [Score=219, Expect=7e-59]} {RNA1509_41935} {RNA1310_16730.1} {RNA815_7760}
3.	MligTC455_36542	60	1.26	Mlig455_053241, Mlig455_066368	Neo: - Age: logFC(26M/2M)=0.671	MFSD8	0.954	-	-	-	0.954	-	-	Mlig455_053241 {REF} {Length: 2620} {Pfam: Major Facilitator Superfamily [PF07690.18, score=87.0]; Phosphate regulon sensor protein PhoR [PF11808.10, score=19.6]} {Human: ENSG00000164073, MFSD8, major facilitator superfamily domain containing 8, [Score=58.9, Expect=1e-08]} {Mouse: ENSMUSG00000116169, Mfsd8, major facilitator superfamily domain containing 8, [Score=56.2, Expect=8e-08]; ENSMUSG00000025759, Mfsd8, major facilitator superfamily domain containing 8, [Score=56.2, Expect=8e-08]} {Smed: dd_Smed_v6_9883_0_1, dd_Smed_v6_9883_0_1, [RH, Score=370, Expect=3e-122]} {RNA1310_19930} {RNA815_20915} Mlig455_066368 {REF} {Length: 2504} {Pfam: Major Facilitator Superfamily [PF07690.18, score=87.3]; Phosphate regulon sensor protein PhoR [PF11808.10, score=19.7]} {Human: ENSG00000164073, MFSD8, major facilitator superfamily domain containing 8, [Score=58.5, Expect=2e-08]} {Mouse: ENSMUSG00000025759, Mfsd8, major facilitator superfamily domain containing 8, [Score=56.2, Expect=8e-08]; ENSMUSG00000116169, Mfsd8, major facilitator superfamily domain containing 8, [Score=56.2, Expect=8e-08]} {Smed: dd_Smed_v6_9883_0_1, dd_Smed_v6_9883_0_1, [RH, Score=371, Expect=3e-123]} {RNA1310_19930} {RNA815_20915}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_19631

150

3.13

Mlig455_026597

Neo: -

Age: Down-Up-Up

1.000

Mlig455_026597 {REF} {Length: 600} {NoTransDecoderORF} {RNA1509_32813} {RNA1310_51673} {RNA815_25910}

MligTC455_12797

1.23

Mlig455_049659

Neo: -

Age: -

PCDHA5

0.957

Mlig455_049659 {REF} {Length: 4667} {Pfam: Cadherin domain [PF00028.19, score=196.7]; Cadherin-like [PF16184.7, score=28.8]; Cadherin-like [PF08266.14, score=24.3]} {Human: ENSG00000204965, PCDHA5, protocadherin alpha 5, [Score=174, Expect=5e-44]; ENSG00000253846, PCDHGA10, protocadherin gamma subfamily A, 10, [Score=169, Expect=3e-42]; ENSG00000165194, PCDH19, protocadherin 19, [Score=166, Expect=4e-41]} {Mouse: ENSMUSG00000055421, Pcdh9, protocadherin 9, [Score=176, Expect=2e-44]; ENSMUSG00000102697, Pcdhac2, protocadherin alpha subfamily C, 2, [Score=169, Expect=3e-42]} {Dmel: FBgn0284247, ds, dachsous, [Score=182, Expect=5e-46]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=154, Expect=2e-37]} {Smed: dd_Smed_v6_12697_0_1, dd_Smed_v6_12697_0_1, [Score=219, Expect=7e-59]} {RNA1509_41935} {RNA1310_16730.1} {RNA815_7760}

MligTC455_36542

1.26

Mlig455_053241, Mlig455_066368

Neo: -

Age: logFC(26M/2M)=0.671

MFSD8

0.954

Mlig455_053241 {REF} {Length: 2620} {Pfam: Major Facilitator Superfamily [PF07690.18, score=87.0]; Phosphate regulon sensor protein PhoR [PF11808.10, score=19.6]} {Human: ENSG00000164073, MFSD8, major facilitator superfamily domain containing 8, [Score=58.9, Expect=1e-08]} {Mouse: ENSMUSG00000116169, Mfsd8, major facilitator superfamily domain containing 8, [Score=56.2, Expect=8e-08]; ENSMUSG00000025759, Mfsd8, major facilitator superfamily domain containing 8, [Score=56.2, Expect=8e-08]} {Smed: dd_Smed_v6_9883_0_1, dd_Smed_v6_9883_0_1, [RH, Score=370, Expect=3e-122]} {RNA1310_19930} {RNA815_20915}

Mlig455_066368 {REF} {Length: 2504} {Pfam: Major Facilitator Superfamily [PF07690.18, score=87.3]; Phosphate regulon sensor protein PhoR [PF11808.10, score=19.7]} {Human: ENSG00000164073, MFSD8, major facilitator superfamily domain containing 8, [Score=58.5, Expect=2e-08]} {Mouse: ENSMUSG00000025759, Mfsd8, major facilitator superfamily domain containing 8, [Score=56.2, Expect=8e-08]; ENSMUSG00000116169, Mfsd8, major facilitator superfamily domain containing 8, [Score=56.2, Expect=8e-08]} {Smed: dd_Smed_v6_9883_0_1, dd_Smed_v6_9883_0_1, [RH, Score=371, Expect=3e-123]} {RNA1310_19930} {RNA815_20915}