Data search


search
Exact
Search

Results for MligTC455_19639

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_19639 194 4.04 Mlig455_006787

Neo: -

Age: -

GK5 Mlig455_006787 {REF} {Length: 4084} {Pfam: FGGY family of carbohydrate kinases, N-terminal domain [PF00370.23, score=125.8]; FGGY family of carbohydrate kinases, C-terminal domain [PF02782.18, score=122.9]} {Human: ENSG00000175066, GK5, glycerol kinase 5, [RH, Score=333, Expect=7e-108]} {Mouse: ENSMUSG00000041440, Gk5, glycerol kinase 5 (putative), [RH, Score=333, Expect=1e-107]} {Dmel: FBgn0035392, CG1271, [RH, Score=298, Expect=2e-94]} {Celegans: WBGene00016939, C55B6.1, [RH, Score=278, Expect=4e-87]} {Smed: dd_Smed_v6_3739_0_2, dd_Smed_v6_3739_0_2, [Score=160, Expect=5e-43]} {RNA1509_26133} {RNA1310_17772, RNA1509_26133} {RNA1509_26133, RNA815_7208}

Cumulative graph for MligTC455_19639

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.986 2.703 0.14994 0.76460
RegionR2 1.321 2.703 0.18101 0.53159
RegionR3 1.113 2.703 0.17222 0.69816
RegionR4 0.582 2.703 0.55933 0.87911
RegionR5 1.169 2.703 0.11858 0.34343
RegionR6 0.968 2.703 0.27478 0.86466
RegionR7 1.252 2.703 0.23809 0.86260
RegionR8 -0.42 2.703 0.94852 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 7.51 2.703 0.09055 0.79889
RegenerationR2 -0.921 2.703 0.17783 0.61947
RegenerationR3 0.619 2.703 0.29816 0.72957
RegenerationR4 0.321 2.703 0.59166 0.90978
RegenerationR5 0.565 2.703 0.26325 0.69472
RegenerationR6 0.448 2.703 0.48725 0.79703
RegenerationBL -0.069 2.703 0.94819 1.00000
RegenerationTP 1.932 2.703 0.03063 0.29356


Genes with expression patterns similar to MligTC455_19639

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_19639 194 4.04 Mlig455_006787

Neo: -

Age: -

GK5 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_006787 {REF} {Length: 4084} {Pfam: FGGY family of carbohydrate kinases, N-terminal domain [PF00370.23, score=125.8]; FGGY family of carbohydrate kinases, C-terminal domain [PF02782.18, score=122.9]} {Human: ENSG00000175066, GK5, glycerol kinase 5, [RH, Score=333, Expect=7e-108]} {Mouse: ENSMUSG00000041440, Gk5, glycerol kinase 5 (putative), [RH, Score=333, Expect=1e-107]} {Dmel: FBgn0035392, CG1271, [RH, Score=298, Expect=2e-94]} {Celegans: WBGene00016939, C55B6.1, [RH, Score=278, Expect=4e-87]} {Smed: dd_Smed_v6_3739_0_2, dd_Smed_v6_3739_0_2, [Score=160, Expect=5e-43]} {RNA1509_26133} {RNA1310_17772, RNA1509_26133} {RNA1509_26133, RNA815_7208}
2. MligTC455_26105 77 1.61 Mlig455_009361

Neo: -

Age: logFC(26M/2M)=-0.384

1.74 - - - 0.953 - 0.787 Mlig455_009361 {REF} {Length: 3566} {RNA1509_41127} {RNA1310_28777.1} {RNA815_5881.1}
3. MligTC455_39877 321 6.69 Mlig455_068056

Neo: -

Age: Down-Up-Down

Region-enriched R5: 1.975/0.00587

NOC3L 1.711 0.749 - - 0.962 - - Mlig455_068056 {REF} {Length: 3343} {TRANSSPLICED} {Pfam: Nucleolar complex-associated protein [PF07540.13, score=67.4]} {Human: ENSG00000173145, NOC3L, NOC3 like DNA replication regulator, [Score=180, Expect=9e-48]} {Mouse: ENSMUSG00000024999, Noc3l, NOC3 like DNA replication regulator, [Score=175, Expect=4e-46]} {Dmel: FBgn0037489, CG1234, [Score=141, Expect=7e-35]} {Celegans: WBGene00016508, C37H5.5, Nucleolar complex protein 3 homolog, [Score=118, Expect=1e-27]} {Smed: dd_Smed_v6_13062_0_1, dd_Smed_v6_13062_0_1, [Score=91.7, Expect=2e-19]} {RNA1509_7132} {RNA1310_9494} {RNA815_11181}
4. MligTC455_47496 107 2.23 Mlig455_044892

Neo: -

Age: Up-Down-Up

PRKCSH 1.678 0.724 - - 0.954 - - Mlig455_044892 {REF} {Length: 2550} {TRANSSPLICED} {Pfam: Glucosidase II beta subunit-like [PF12999.9, score=141.3]; Glucosidase II beta subunit-like protein [PF13015.8, score=86.1]; Glucosidase II beta subunit-like protein [PF07915.15, score=37.6]; EF hand [PF00036.34, score=25.9]; EF-hand domain pair [PF13499.8, score=25.4]; EF-hand domain [PF13405.8, score=23.7]; EF hand [PF13202.8, score=20.0]} {Human: ENSG00000130175, PRKCSH, protein kinase C substrate 80K-H, [RH, Score=360, Expect=7e-119]} {Mouse: ENSMUSG00000003402, Prkcsh, protein kinase C substrate 80K-H, [RH, Score=360, Expect=6e-119]} {Dmel: FBgn0032643, GCS2beta, Glucosidase 2 beta subunit, [RH, Score=278, Expect=4e-87]} {Celegans: WBGene00014249, ZK1307.8, [RH, Score=347, Expect=5e-114]} {Smed: dd_Smed_v6_1730_0_1, dd_Smed_v6_1730_0_1, [RH, Score=408, Expect=2e-138]} {RNA1509_3103} {RNA1310_16892, RNA1509_3103} {RNA1509_3103, RNA815_6798}
5. MligTC455_16382 61 1.28 Mlig455_070761

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.031

0.983 - - - 0.983 - - Mlig455_070761 {REF} {Length: 337} {TRANSSPLICED} {RNA1310_117527}
6. MligTC455_36936 69 1.45 Mlig455_036570

Neo: -

Age: -

0.959 - - - 0.959 - - Mlig455_036570 {REF} {Length: 238} {NoTransDecoderORF} {RNA1509_59553} {RNA1310_99471} {RNA815_64986}
7. MligTC455_22840 314 6.53 Mlig455_043844, Mlig455_047405

Neo: -

Age: logFC(26M/2M)=0.636

0.955 - - - 0.955 - -

Mlig455_043844 {REF} {Length: 1558} {TRANSSPLICED} {Pfam: SOSS complex subunit C [PF15925.7, score=37.9]} {Dmel: FBgn0259720, CG42374, [Score=41.2, Expect=1e-05]} {RNA1509_60113} {RNA1310_37938.2} {RNA815_28362.1}

Mlig455_047405 {REF} {Length: 1500} {TRANSSPLICED} {Pfam: SOSS complex subunit C [PF15925.7, score=37.9]} {Dmel: FBgn0259720, CG42374, [Score=41.2, Expect=1e-05]} {RNA1509_60113} {RNA1310_37938.2} {RNA815_28362.1}
8. MligTC455_54267 737 15.36 Mlig455_051071

Neo: Int S/G2/M

Age: Up-Down-Up

SUPT5H 0.953 - - - 0.953 - - Mlig455_051071 {REF} {Length: 5544} {TRANSSPLICED} {Pfam: KOW motif [PF00467.31, score=88.3]; Early transcription elongation factor of RNA pol II, NGN section [PF03439.15, score=86.4]; Spt5 transcription elongation factor, acidic N-terminal [PF11942.10, score=36.8]; Spt5 C-terminal nonapeptide repeat binding Spt4 [PF12815.9, score=33.2]} {Human: ENSG00000196235, SUPT5H, SPT5 homolog, DSIF elongation factor subunit, [RH, Score=805, Expect=0.0]} {Mouse: ENSMUSG00000003435, Supt5, suppressor of Ty 5, [RH, Score=808, Expect=0.0]} {Dmel: FBgn0040273, Spt5, [RH, Score=756, Expect=0.0]} {Celegans: WBGene00005015, spt-5, Transcription elongation factor SPT5, [RH, Score=572, Expect=0.0]} {Smed: dd_Smed_v6_3492_0_1, dd_Smed_v6_3492_0_1, [RH, Score=478, Expect=5e-152]} {RNA1509_2802} {RNA1310_3974.1} {RNA815_4949}
9. MligTC455_25526 371 7.73 Mlig455_033027, Mlig455_044084

Neo: Int S/G2/M

Age: -

TAF1 0.952 - - - 0.952 - -

Mlig455_033027 {REF} {Length: 6838} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF3591) [PF12157.10, score=436.5]; Bromodomain [PF00439.27, score=138.2]; Zinc knuckle [PF15288.8, score=32.6]; TATA box-binding protein binding [PF09247.13, score=32.0]} {Human: ENSG00000147133, TAF1, TATA-box binding protein associated factor 1, [RH, Score=917, Expect=0.0]; ENSG00000122728, TAF1L, TATA-box binding protein associated factor 1 like, [RH, Score=883, Expect=0.0]} {Mouse: ENSMUSG00000031314, Taf1, TATA-box binding protein associated factor 1, [RH, Score=911, Expect=0.0]} {Dmel: FBgn0010355, Taf1, TBP-associated factor 1, [RH, Score=904, Expect=0.0]} {Celegans: WBGene00006382, taf-1, Transcription initiation factor TFIID subunit 1, [RH, Score=506, Expect=3e-149]} {Smed: dd_Smed_v6_11149_0_1, dd_Smed_v6_11149_0_1, [RH, Score=828, Expect=0.0]} {RNA1509_8177} {RNA1310_712.1} {RNA815_947}

Mlig455_044084 {REF} {Length: 6720} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF3591) [PF12157.10, score=437.4]; Bromodomain [PF00439.27, score=139.1]; Zinc knuckle [PF15288.8, score=33.0]} {Human: ENSG00000147133, TAF1, TATA-box binding protein associated factor 1, [RH, Score=895, Expect=0.0]; ENSG00000122728, TAF1L, TATA-box binding protein associated factor 1 like, [RH, Score=864, Expect=0.0]} {Mouse: ENSMUSG00000031314, Taf1, TATA-box binding protein associated factor 1, [RH, Score=887, Expect=0.0]} {Dmel: FBgn0010355, Taf1, TBP-associated factor 1, [RH, Score=645, Expect=0.0]} {Celegans: WBGene00006382, taf-1, Transcription initiation factor TFIID subunit 1, [Score=470, Expect=1e-139]} {Smed: dd_Smed_v6_11149_0_1, dd_Smed_v6_11149_0_1, [Score=714, Expect=0.0]} {RNA1509_52440, RNA1509_52926, RNA1509_55670, RNA1509_8177} {RNA1310_712.1, RNA1509_52440, RNA1509_52926, RNA1509_55670, RNA1509_8177} {RNA1509_52440, RNA1509_52926, RNA1509_55670, RNA1509_8177, RNA815_947}
10. MligTC455_41884 56 1.16 Mlig455_066543

Neo: -

Age: -

ANKRD50 0.951 - - 0.951 - - - Mlig455_066543 {REF} {Length: 3297} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=75.2]; Ankyrin repeats (many copies) [PF13637.8, score=64.2]; Ankyrin repeats (many copies) [PF13857.8, score=53.3]; Ankyrin repeat [PF13606.8, score=48.7]; Mab-21 protein [PF03281.16, score=42.2]; Ankyrin repeat [PF00023.32, score=37.8]} {Human: ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=85.1, Expect=4e-16]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=86.7, Expect=9e-17]} {Dmel: FBgn0041096, rols, rolling pebbles, [Score=86.7, Expect=7e-17]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=63.5, Expect=7e-10]} {Smed: dd_Smed_v6_6779_0_1, dd_Smed_v6_6779_0_1, [Score=87.0, Expect=3e-17]} {RNA1509_27730} {RNA1310_22442} {RNA815_2426.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA