M. lignano Tomo-Seq
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Results for MligTC455_19640

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_19640 115 2.39 Mlig455_054747

Neo: -

Age: -

 Mlig455_054747 {REF} {Length: 1489} {RNA1509_38960} {RNA1310_21695.1} {RNA815_21553}

Cumulative graph for MligTC455_19640

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.96 2.28 0.99969 1.00000
RegionR2 0.812 2.28 0.48628 0.86917
RegionR3 1.146 2.28 0.27843 0.82212
RegionR4 2.592 2.28 0.02657 0.12455
RegionR5 1.967 2.28 0.02326 0.10796
RegionR6 0.671 2.28 0.51008 1.00000
RegionR7 0.975 2.28 0.44541 1.00000
RegionR8 -5.202 2.28 0.99990 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.335 2.28 0.99988 1.00000
RegenerationR2 -0.593 2.28 0.43731 0.83866
RegenerationR3 -0.39 2.28 0.59240 0.90460
RegenerationR4 -0.876 2.28 0.25507 0.70305
RegenerationR5 -0.089 2.28 0.89411 1.00000
RegenerationR6 0.082 2.28 0.92094 1.00000
RegenerationBL 2.295 2.28 0.18592 0.51707
RegenerationTP 2.75 2.28 0.17038 0.60364


Genes with expression patterns similar to MligTC455_19640

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_19640 115 2.39 Mlig455_054747

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_054747 {REF} {Length: 1489} {RNA1509_38960} {RNA1310_21695.1} {RNA815_21553}
2. MligTC455_50790 272 5.67 Mlig455_032966, Mlig455_041856

Neo: -

Age: -

 GTF2E2 2.499 0.825 - - 0.953 - 0.721

Mlig455_032966 {REF} {Length: 1725} {TRANSSPLICED} {Pfam: TFIIE beta subunit core domain [PF02186.17, score=48.6]; TFA2 Winged helix domain 2 [PF18121.3, score=21.0]} {Human: ENSG00000197265, GTF2E2, general transcription factor IIE subunit 2, [RH, Score=166, Expect=4e-49]} {Mouse: ENSMUSG00000031585, Gtf2e2, general transcription factor II E, polypeptide 2 (beta subunit), [RH, Score=160, Expect=2e-47]} {Dmel: FBgn0015829, TfIIEbeta, Transcription factor IIEbeta, [RH, Score=152, Expect=3e-44]} {Celegans: WBGene00010054, F54D5.11, Transcription initiation factor IIE subunit beta, [RH, Score=115, Expect=3e-30]} {Smed: dd_Smed_v6_3857_0_1, dd_Smed_v6_3857_0_1, [RH, Score=111, Expect=8e-29]} {RNA1509_23345, RNA1509_54525} {RNA1310_29920, RNA1509_23345, RNA1509_54525} {RNA1509_23345, RNA1509_54525, RNA815_14347.1}

Mlig455_041856 {REF} {Length: 1722} {TRANSSPLICED} {Pfam: TFIIE beta subunit core domain [PF02186.17, score=48.6]; TFA2 Winged helix domain 2 [PF18121.3, score=21.0]} {Human: ENSG00000197265, GTF2E2, general transcription factor IIE subunit 2, [RH, Score=166, Expect=4e-49]} {Mouse: ENSMUSG00000031585, Gtf2e2, general transcription factor II E, polypeptide 2 (beta subunit), [RH, Score=160, Expect=2e-47]} {Dmel: FBgn0015829, TfIIEbeta, Transcription factor IIEbeta, [RH, Score=152, Expect=3e-44]} {Celegans: WBGene00010054, F54D5.11, Transcription initiation factor IIE subunit beta, [RH, Score=115, Expect=3e-30]} {Smed: dd_Smed_v6_3857_0_1, dd_Smed_v6_3857_0_1, [RH, Score=111, Expect=8e-29]} {RNA1509_23345} {RNA1310_29920} {RNA815_14347.1}
3. MligTC455_22004 427 8.89 Mlig455_009691, Mlig455_063051

Neo: -

Age: -

 DNMBP 2.397 0.702 - - 0.724 - 0.971

Mlig455_009691 {REF} {Length: 5602} {TRANSSPLICED} {Pfam: RhoGEF domain [PF00621.22, score=79.2]; Variant SH3 domain [PF14604.8, score=76.2]; BAR domain [PF03114.20, score=72.4]; SH3 domain [PF00018.30, score=62.1]; Variant SH3 domain [PF07653.19, score=41.2]} {Human: ENSG00000107554, DNMBP, dynamin binding protein, [Score=126, Expect=1e-28]} {Mouse: ENSMUSG00000025195, Dnmbp, dynamin binding protein, [Score=130, Expect=6e-30]} {Dmel: FBgn0024277, trio, [Score=73.9, Expect=4e-13]} {Celegans: WBGene00044989, Y37A1B.17, [RH, Score=87.8, Expect=4e-17]} {Smed: dd_Smed_v6_7179_0_1, dd_Smed_v6_7179_0_1, [RH, Score=129, Expect=5e-30]} {RNA1509_16290} {RNA1310_3067} {RNA815_9576}

Mlig455_063051 {REF} {Length: 4708} {TRANSSPLICED} {Pfam: RhoGEF domain [PF00621.22, score=78.9]; BAR domain [PF03114.20, score=78.0]; Variant SH3 domain [PF14604.8, score=76.1]; SH3 domain [PF00018.30, score=62.3]; Variant SH3 domain [PF07653.19, score=40.3]} {Human: ENSG00000107554, DNMBP, dynamin binding protein, [RH, Score=134, Expect=4e-31]} {Mouse: ENSMUSG00000025195, Dnmbp, dynamin binding protein, [RH, Score=137, Expect=5e-32]} {Dmel: FBgn0024277, trio, [Score=73.6, Expect=6e-13]} {Celegans: WBGene00044989, Y37A1B.17, [RH, Score=88.2, Expect=3e-17]} {Smed: dd_Smed_v6_7179_0_1, dd_Smed_v6_7179_0_1, [RH, Score=125, Expect=7e-29]} {RNA1509_16290} {RNA1310_3067} {RNA815_9576}
4. MligTC455_53476 1856 38.67 Mlig455_044897, Mlig455_055553

Neo: Neoblast

Age: Down-Up-Up

Region-enriched R5: 1.549/0.00017
Region-enriched R4: 1.452/0.00573

 1.716 0.759 - - - - 0.957

Mlig455_044897 {REF} {Length: 566} {TRANSSPLICED} {RNA1509_36301} {RNA1310_26227} {RNA815_13760}

Mlig455_055553 {REF} {Length: 1165} {RNA1509_13236, RNA1509_36301} {RNA1310_26227, RNA1509_13236, RNA1509_36301} {RNA1509_13236, RNA1509_36301, RNA815_13760}
5. MligTC455_40115 578 12.05 Mlig455_066999

Neo: -

Age: Down-Up-Up

Region-enriched R5: 1.595/0.00015

 DNAJC21 0.957 - - - - - 0.957 Mlig455_066999 {REF} {Length: 1258} {TRANSSPLICED} {Pfam: DnaJ domain [PF00226.33, score=72.6]} {Human: ENSG00000168724, DNAJC21, DnaJ heat shock protein family (Hsp40) member C21, [Score=125, Expect=2e-31]} {Mouse: ENSMUSG00000044224, Dnajc21, DnaJ heat shock protein family (Hsp40) member C21, [Score=129, Expect=7e-33]} {Dmel: FBgn0027599, CG2790, [Score=135, Expect=4e-35]} {Celegans: WBGene00001035, dnj-17, DNaJ domain (Prokaryotic heat shock protein), [Score=143, Expect=1e-38]} {Smed: dd_Smed_v6_5775_0_1, dd_Smed_v6_5775_0_1, [Score=114, Expect=5e-28]} {RNA1509_35039} {RNA1310_24216, RNA1509_35039} {RNA1509_35039, RNA815_5277.2}

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