TomoSeq data search

Data search

Results for MligTC455_19650

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_19650	1948	40.58	Mlig455_013102, Mlig455_013194	Neo: - Age: logFC(26M/2M)=0.492 Region-enriched R4: 1.170/0.01225 Region-enriched R5: 1.166/0.00064	MRPL13	Mlig455_013102 {REF} {Length: 782} {TRANSSPLICED} {Pfam: Ribosomal protein L13 [PF00572.20, score=67.8]} {Human: ENSG00000172172, MRPL13, mitochondrial ribosomal protein L13, [RH, Score=124, Expect=1e-35]} {Mouse: ENSMUSG00000022370, Mrpl13, mitochondrial ribosomal protein L13, [RH, Score=117, Expect=5e-33]} {Dmel: FBgn0032720, mRpL13, mitochondrial ribosomal protein L13, [RH, Score=112, Expect=4e-31]} {Celegans: WBGene00008769, mrpl-13, Mitochondrial Ribosomal Protein, Large, [RH, Score=82.8, Expect=1e-19]} {Smed: dd_Smed_v6_5844_0_1, dd_Smed_v6_5844_0_1, [RH, Score=179, Expect=1e-57]} {RNA1509_10955} {RNA1310_32923} {RNA815_22378.1} Mlig455_013194 {REF} {Length: 782} {TRANSSPLICED} {Pfam: Ribosomal protein L13 [PF00572.20, score=67.8]} {Human: ENSG00000172172, MRPL13, mitochondrial ribosomal protein L13, [RH, Score=124, Expect=1e-35]} {Mouse: ENSMUSG00000022370, Mrpl13, mitochondrial ribosomal protein L13, [RH, Score=117, Expect=5e-33]} {Dmel: FBgn0032720, mRpL13, mitochondrial ribosomal protein L13, [RH, Score=112, Expect=4e-31]} {Celegans: WBGene00008769, mrpl-13, Mitochondrial Ribosomal Protein, Large, [RH, Score=82.8, Expect=1e-19]} {Smed: dd_Smed_v6_5844_0_1, dd_Smed_v6_5844_0_1, [RH, Score=179, Expect=1e-57]} {RNA1509_10955} {RNA1310_32923, RNA1509_10955} {RNA1509_10955, RNA815_22378.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_19650

1948

40.58

Mlig455_013102, Mlig455_013194

Neo: -

Age: logFC(26M/2M)=0.492

Region-enriched R4: 1.170/0.01225
Region-enriched R5: 1.166/0.00064

MRPL13

Mlig455_013102 {REF} {Length: 782} {TRANSSPLICED} {Pfam: Ribosomal protein L13 [PF00572.20, score=67.8]} {Human: ENSG00000172172, MRPL13, mitochondrial ribosomal protein L13, [RH, Score=124, Expect=1e-35]} {Mouse: ENSMUSG00000022370, Mrpl13, mitochondrial ribosomal protein L13, [RH, Score=117, Expect=5e-33]} {Dmel: FBgn0032720, mRpL13, mitochondrial ribosomal protein L13, [RH, Score=112, Expect=4e-31]} {Celegans: WBGene00008769, mrpl-13, Mitochondrial Ribosomal Protein, Large, [RH, Score=82.8, Expect=1e-19]} {Smed: dd_Smed_v6_5844_0_1, dd_Smed_v6_5844_0_1, [RH, Score=179, Expect=1e-57]} {RNA1509_10955} {RNA1310_32923} {RNA815_22378.1}

Mlig455_013194 {REF} {Length: 782} {TRANSSPLICED} {Pfam: Ribosomal protein L13 [PF00572.20, score=67.8]} {Human: ENSG00000172172, MRPL13, mitochondrial ribosomal protein L13, [RH, Score=124, Expect=1e-35]} {Mouse: ENSMUSG00000022370, Mrpl13, mitochondrial ribosomal protein L13, [RH, Score=117, Expect=5e-33]} {Dmel: FBgn0032720, mRpL13, mitochondrial ribosomal protein L13, [RH, Score=112, Expect=4e-31]} {Celegans: WBGene00008769, mrpl-13, Mitochondrial Ribosomal Protein, Large, [RH, Score=82.8, Expect=1e-19]} {Smed: dd_Smed_v6_5844_0_1, dd_Smed_v6_5844_0_1, [RH, Score=179, Expect=1e-57]} {RNA1509_10955} {RNA1310_32923, RNA1509_10955} {RNA1509_10955, RNA815_22378.1}

Cumulative graph for MligTC455_19650

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.58	5.589	0.43261	1.00000
RegionR2	-0.812	5.589	0.03911	0.22963
RegionR3	0.244	5.589	0.43785	0.95479
RegionR4	1.17	5.589	0.00123	0.01225
RegionR5	1.166	5.589	0.00003	0.00064
RegionR6	0.296	5.589	0.34507	0.93143
RegionR7	-0.107	5.589	0.77533	1.00000
RegionR8	-1.377	5.589	0.00896	0.17715

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.358	5.589	0.72979	1.00000
RegenerationR2	-0.106	5.589	0.77352	0.98122
RegenerationR3	-0.052	5.589	0.88970	1.00000
RegenerationR4	-0.242	5.589	0.53239	0.88480
RegenerationR5	-0.152	5.589	0.66747	0.93952
RegenerationR6	-0.025	5.589	0.94626	1.00000
RegenerationBL	0.099	5.589	0.80771	1.00000
RegenerationTP	0.841	5.589	0.05816	0.39213

Genes with expression patterns similar to MligTC455_19650

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_19650	1948	40.58	Mlig455_013102, Mlig455_013194	Neo: - Age: logFC(26M/2M)=0.492 Region-enriched R4: 1.170/0.01225 Region-enriched R5: 1.166/0.00064	MRPL13	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_013102 {REF} {Length: 782} {TRANSSPLICED} {Pfam: Ribosomal protein L13 [PF00572.20, score=67.8]} {Human: ENSG00000172172, MRPL13, mitochondrial ribosomal protein L13, [RH, Score=124, Expect=1e-35]} {Mouse: ENSMUSG00000022370, Mrpl13, mitochondrial ribosomal protein L13, [RH, Score=117, Expect=5e-33]} {Dmel: FBgn0032720, mRpL13, mitochondrial ribosomal protein L13, [RH, Score=112, Expect=4e-31]} {Celegans: WBGene00008769, mrpl-13, Mitochondrial Ribosomal Protein, Large, [RH, Score=82.8, Expect=1e-19]} {Smed: dd_Smed_v6_5844_0_1, dd_Smed_v6_5844_0_1, [RH, Score=179, Expect=1e-57]} {RNA1509_10955} {RNA1310_32923} {RNA815_22378.1} Mlig455_013194 {REF} {Length: 782} {TRANSSPLICED} {Pfam: Ribosomal protein L13 [PF00572.20, score=67.8]} {Human: ENSG00000172172, MRPL13, mitochondrial ribosomal protein L13, [RH, Score=124, Expect=1e-35]} {Mouse: ENSMUSG00000022370, Mrpl13, mitochondrial ribosomal protein L13, [RH, Score=117, Expect=5e-33]} {Dmel: FBgn0032720, mRpL13, mitochondrial ribosomal protein L13, [RH, Score=112, Expect=4e-31]} {Celegans: WBGene00008769, mrpl-13, Mitochondrial Ribosomal Protein, Large, [RH, Score=82.8, Expect=1e-19]} {Smed: dd_Smed_v6_5844_0_1, dd_Smed_v6_5844_0_1, [RH, Score=179, Expect=1e-57]} {RNA1509_10955} {RNA1310_32923, RNA1509_10955} {RNA1509_10955, RNA815_22378.1}
2.	MligTC455_42571	3251	67.72	Mlig455_035168	Neo: - Age: logFC(26M/2M)=-0.472 Region-enriched R4: 1.085/0.02080 Region-enriched R5: 1.005/0.00868	RIDA	0.957	-	-	-	0.957	-	-	Mlig455_035168 {REF} {Length: 747} {TRANSSPLICED} {Pfam: Endoribonuclease L-PSP [PF01042.23, score=139.7]} {Human: ENSG00000132541, RIDA, reactive intermediate imine deaminase A homolog, [RH, Score=149, Expect=4e-47]} {Mouse: ENSMUSG00000022323, Rida, reactive intermediate imine deaminase A homolog, [RH, Score=151, Expect=5e-48]} {Dmel: FBgn0086691, UK114, [RH, Score=127, Expect=2e-38]} {Celegans: WBGene00016011, C23G10.2, RutC family protein C23G10.2, [RH, Score=143, Expect=2e-44]} {Smed: dd_Smed_v6_1895_0_1, dd_Smed_v6_1895_0_1, [RH, Score=154, Expect=3e-49]} {RNA1509_10509, RNA1509_25270, RNA1509_5491} {RNA1310_43287, RNA1509_10509, RNA1509_25270, RNA1509_5491} {RNA1509_10509, RNA1509_25270, RNA1509_5491, RNA815_23194}
3.	MligTC455_34297	1817	37.86	Mlig455_065126	Neo: - Age: - Region-enriched R5: 1.122/0.00001	EIF5B	0.954	-	-	-	-	-	0.954	Mlig455_065126 {REF} {Length: 4850} {TRANSSPLICED} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=114.8]; Translation-initiation factor 2 [PF11987.10, score=71.4]; Elongation factor Tu domain 2 [PF03144.27, score=51.2]; Elongation factor Tu domain 4 [PF14578.8, score=47.0]; 50S ribosome-binding GTPase [PF01926.25, score=33.8]; Conserved hypothetical ATP binding protein [PF03029.19, score=25.3]; Cwf15/Cwc15 cell cycle control protein [PF04889.14, score=25.0]} {Human: ENSG00000158417, EIF5B, eukaryotic translation initiation factor 5B, [RH, Score=839, Expect=0.0]} {Mouse: ENSMUSG00000026083, Eif5b, eukaryotic translation initiation factor 5B, [RH, Score=833, Expect=0.0]} {Dmel: FBgn0026259, eIF5B, eukaryotic translation initiation factor 5B, [RH, Score=807, Expect=0.0]} {Celegans: WBGene00021857, iffb-1, Eukaryotic translation initiation factor eIF5B; Initiation Factor Five B (eIF5B), [RH, Score=764, Expect=0.0]} {Smed: dd_Smed_v6_1274_1_1, dd_Smed_v6_1274_1_1, [RH, Score=671, Expect=0.0]} {RNA1509_31809, RNA1509_41391, RNA1509_46822, RNA1509_59282, RNA1509_59486, RNA1509_7171} {RNA1310_3913.1, RNA1509_31809, RNA1509_41391, RNA1509_46822, RNA1509_59282, RNA1509_59486} {RNA1509_31809, RNA1509_41391, RNA1509_46822, RNA1509_59282, RNA1509_59486, RNA815_1112}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_19650

1948

40.58

Mlig455_013102, Mlig455_013194

Neo: -

Age: logFC(26M/2M)=0.492

Region-enriched R4: 1.170/0.01225
Region-enriched R5: 1.166/0.00064

MRPL13

1.000

MligTC455_42571

3251

67.72

Mlig455_035168

Neo: -

Age: logFC(26M/2M)=-0.472

Region-enriched R4: 1.085/0.02080
Region-enriched R5: 1.005/0.00868

RIDA

0.957

Mlig455_035168 {REF} {Length: 747} {TRANSSPLICED} {Pfam: Endoribonuclease L-PSP [PF01042.23, score=139.7]} {Human: ENSG00000132541, RIDA, reactive intermediate imine deaminase A homolog, [RH, Score=149, Expect=4e-47]} {Mouse: ENSMUSG00000022323, Rida, reactive intermediate imine deaminase A homolog, [RH, Score=151, Expect=5e-48]} {Dmel: FBgn0086691, UK114, [RH, Score=127, Expect=2e-38]} {Celegans: WBGene00016011, C23G10.2, RutC family protein C23G10.2, [RH, Score=143, Expect=2e-44]} {Smed: dd_Smed_v6_1895_0_1, dd_Smed_v6_1895_0_1, [RH, Score=154, Expect=3e-49]} {RNA1509_10509, RNA1509_25270, RNA1509_5491} {RNA1310_43287, RNA1509_10509, RNA1509_25270, RNA1509_5491} {RNA1509_10509, RNA1509_25270, RNA1509_5491, RNA815_23194}

MligTC455_34297

1817

37.86

Mlig455_065126

Neo: -

Age: -

Region-enriched R5: 1.122/0.00001

EIF5B

0.954

Mlig455_065126 {REF} {Length: 4850} {TRANSSPLICED} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=114.8]; Translation-initiation factor 2 [PF11987.10, score=71.4]; Elongation factor Tu domain 2 [PF03144.27, score=51.2]; Elongation factor Tu domain 4 [PF14578.8, score=47.0]; 50S ribosome-binding GTPase [PF01926.25, score=33.8]; Conserved hypothetical ATP binding protein [PF03029.19, score=25.3]; Cwf15/Cwc15 cell cycle control protein [PF04889.14, score=25.0]} {Human: ENSG00000158417, EIF5B, eukaryotic translation initiation factor 5B, [RH, Score=839, Expect=0.0]} {Mouse: ENSMUSG00000026083, Eif5b, eukaryotic translation initiation factor 5B, [RH, Score=833, Expect=0.0]} {Dmel: FBgn0026259, eIF5B, eukaryotic translation initiation factor 5B, [RH, Score=807, Expect=0.0]} {Celegans: WBGene00021857, iffb-1, Eukaryotic translation initiation factor eIF5B; Initiation Factor Five B (eIF5B), [RH, Score=764, Expect=0.0]} {Smed: dd_Smed_v6_1274_1_1, dd_Smed_v6_1274_1_1, [RH, Score=671, Expect=0.0]} {RNA1509_31809, RNA1509_41391, RNA1509_46822, RNA1509_59282, RNA1509_59486, RNA1509_7171} {RNA1310_3913.1, RNA1509_31809, RNA1509_41391, RNA1509_46822, RNA1509_59282, RNA1509_59486} {RNA1509_31809, RNA1509_41391, RNA1509_46822, RNA1509_59282, RNA1509_59486, RNA815_1112}