Data search
Results for MligTC455_19678
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_19678 | 613 | 12.77 | Mlig455_046045 | Neo: - Age: logFC(26M/2M)=-0.420 Region-enriched R4: 1.480/0.00800 |
SEC22B | Mlig455_046045 {REF} {Length: 1389} {Pfam: Regulated-SNARE-like domain [PF13774.8, score=81.7]; Synaptobrevin [PF00957.23, score=52.1]} {Human: ENSG00000265808, SEC22B, SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), [Score=253, Expect=2e-85]} {Mouse: ENSMUSG00000027879, Sec22b, SEC22 homolog B, vesicle trafficking protein, [Score=253, Expect=1e-85]} {Dmel: FBgn0260855, Sec22, Secretory 22, [Score=213, Expect=6e-70]} {Celegans: WBGene00018853, sec-22, Yeast SEC homolog, [Score=178, Expect=2e-56]} {Smed: dd_Smed_v6_8369_0_1, dd_Smed_v6_8369_0_1, [Score=251, Expect=3e-85]} {RNA1509_8240} {RNA1310_23319.1} {RNA815_8971} |
Cumulative graph for MligTC455_19678
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.185 | 4.127 | 0.39714 | 1.00000 | |
| RegionR2 | -0.695 | 4.127 | 0.22580 | 0.59630 | |
| RegionR3 | 1.019 | 4.127 | 0.01072 | 0.16086 | |
| RegionR4 | 1.48 | 4.127 | 0.00071 | 0.00800 | |
| RegionR5 | 1.393 | 4.127 | 0.00010 | 0.00173 | |
| RegionR6 | 0.475 | 4.127 | 0.27520 | 0.86482 | |
| RegionR7 | -2.633 | 4.127 | 0.00208 | 0.05805 | |
| RegionR8 | 0.147 | 4.127 | 0.83834 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.593 | 4.127 | 0.77932 | 1.00000 | |
| RegenerationR2 | -1.029 | 4.127 | 0.02758 | 0.27428 | |
| RegenerationR3 | -1.585 | 4.127 | 0.00017 | 0.01655 | |
| RegenerationR4 | -1.008 | 4.127 | 0.01330 | 0.17917 | |
| RegenerationR5 | -1.161 | 4.127 | 0.00225 | 0.08272 | |
| RegenerationR6 | -0.362 | 4.127 | 0.39317 | 0.73219 | |
| RegenerationBL | -0.619 | 4.127 | 0.38570 | 0.75377 | |
| RegenerationTP | -0.161 | 4.127 | 0.85826 | 1.00000 |
Genes with expression patterns similar to MligTC455_19678
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_19678 | 613 | 12.77 | Mlig455_046045 | Neo: - Age: logFC(26M/2M)=-0.420 Region-enriched R4: 1.480/0.00800 |
SEC22B | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_046045 {REF} {Length: 1389} {Pfam: Regulated-SNARE-like domain [PF13774.8, score=81.7]; Synaptobrevin [PF00957.23, score=52.1]} {Human: ENSG00000265808, SEC22B, SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), [Score=253, Expect=2e-85]} {Mouse: ENSMUSG00000027879, Sec22b, SEC22 homolog B, vesicle trafficking protein, [Score=253, Expect=1e-85]} {Dmel: FBgn0260855, Sec22, Secretory 22, [Score=213, Expect=6e-70]} {Celegans: WBGene00018853, sec-22, Yeast SEC homolog, [Score=178, Expect=2e-56]} {Smed: dd_Smed_v6_8369_0_1, dd_Smed_v6_8369_0_1, [Score=251, Expect=3e-85]} {RNA1509_8240} {RNA1310_23319.1} {RNA815_8971} |
| 2. | MligTC455_35949 | 279 | 5.81 | Mlig455_011030 | Neo: - Age: - Region-enriched R3: 2.439/0.03369 |
DIRC2 | 3.384 | - | - | 0.743 | 0.969 | 0.789 | 0.883 | Mlig455_011030 {REF} {Length: 1623} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=70.1]} {Human: ENSG00000138463, DIRC2, disrupted in renal carcinoma 2, [RH, Score=194, Expect=4e-56]} {Mouse: ENSMUSG00000022848, Dirc2, disrupted in renal carcinoma 2 (human), [RH, Score=197, Expect=1e-57]} {Celegans: WBGene00015632, C09D4.1, Uncharacterized MFS-type transporter C09D4.1, [Score=102, Expect=2e-23]} {Smed: dd_Smed_v6_12577_0_1, dd_Smed_v6_12577_0_1, [Score=145, Expect=9e-39]} {RNA1509_19444} {RNA1310_8463, RNA1509_19444} {RNA1509_19444, RNA815_7671} |
| 3. | MligTC455_50494 | 578 | 12.05 | Mlig455_054711 | Neo: - Age: - |
NCEH1 | 2.645 | - | - | - | 0.889 | 0.955 | 0.801 | Mlig455_054711 {REF} {Length: 1399} {TRANSSPLICED} {Pfam: alpha/beta hydrolase fold [PF07859.15, score=174.8]; Steryl acetyl hydrolase [PF10340.11, score=22.7]; Carboxylesterase family [PF00135.30, score=21.8]} {Human: ENSG00000144959, NCEH1, neutral cholesterol ester hydrolase 1, [RH, Score=139, Expect=1e-36]} {Mouse: ENSMUSG00000027698, Nceh1, neutral cholesterol ester hydrolase 1, [RH, Score=132, Expect=2e-34]} {Dmel: FBgn0034491, Hsl, Hormone-sensitive lipase, [Score=60.8, Expect=1e-09]} {Celegans: WBGene00017515, F16F9.4, [Score=148, Expect=1e-40]} {Smed: dd_Smed_v6_4674_0_1, dd_Smed_v6_4674_0_1, [Score=138, Expect=8e-37]} {RNA1509_21580} {RNA1310_21445} {RNA815_9936} |
| 4. | MligTC455_24996 | 342 | 7.13 | Mlig455_019421 | Neo: - Age: - |
CYP3A5 | 2.566 | - | - | - | 0.958 | 0.827 | 0.781 | Mlig455_019421 {REF} {Length: 1953} {Pfam: Cytochrome P450 [PF00067.24, score=312.8]} {Human: ENSG00000106258, CYP3A5, cytochrome P450 family 3 subfamily A member 5, [Score=265, Expect=2e-82]; ENSG00000160868, CYP3A4, cytochrome P450 family 3 subfamily A member 4, [Score=261, Expect=7e-81]; ENSG00000021461, CYP3A43, cytochrome P450 family 3 subfamily A member 43, [Score=261, Expect=5e-81]; ENSG00000160870, CYP3A7, cytochrome P450 family 3 subfamily A member 7, [Score=256, Expect=3e-79]; ENSG00000282301, CYP3A7-CYP3A51P, CYP3A7-CYP3A51P readthrough, [Score=255, Expect=2e-78]} {Mouse: ENSMUSG00000029727, Cyp3a13, cytochrome P450, family 3, subfamily a, polypeptide 13, [Score=265, Expect=9e-83]; ENSMUSG00000056035, Cyp3a11, cytochrome P450, family 3, subfamily a, polypeptide 11, [Score=261, Expect=6e-81]; ENSMUSG00000038656, Cyp3a16, cytochrome P450, family 3, subfamily a, polypeptide 16, [Score=255, Expect=8e-79]; ENSMUSG00000075551, Cyp3a41a, cytochrome P450, family 3, subfamily a, polypeptide 41A, [Score=253, Expect=3e-78]; ENSMUSG00000029630, Cyp3a25, cytochrome P450, family 3, subfamily a, polypeptide 25, [Score=253, Expect=3e-78]; ENSMUSG00000075552, Cyp3a41b, cytochrome P450, family 3, subfamily a, polypeptide 41B, [Score=253, Expect=3e-78]} {Dmel: FBgn0013772, Cyp6a8, Cytochrome P450-6a8, [RH, Score=224, Expect=5e-67]} {Celegans: WBGene00011676, cyp-13A2, Putative cytochrome P450 CYP13A2, [Score=185, Expect=2e-52]} {Smed: dd_Smed_v6_4319_0_1, dd_Smed_v6_4319_0_1, [Score=296, Expect=7e-95]} {RNA1509_49442} {RNA1310_14452} {RNA815_6310} |
| 5. | MligTC455_31280 | 1211 | 25.23 | Mlig455_049696 | Neo: - Age: Up-Down-Down |
PCYT1B | 2.53 | - | - | - | 0.854 | 0.951 | 0.725 | Mlig455_049696 {REF} {Length: 4412} {TRANSSPLICED} {Pfam: Cytidylyltransferase-like [PF01467.28, score=91.7]} {Human: ENSG00000102230, PCYT1B, phosphate cytidylyltransferase 1, choline, beta, [RH, Score=298, Expect=1e-97]; ENSG00000161217, PCYT1A, phosphate cytidylyltransferase 1, choline, alpha, [RH, Score=288, Expect=5e-94]} {Mouse: ENSMUSG00000035246, Pcyt1b, phosphate cytidylyltransferase 1, choline, beta isoform, [RH, Score=295, Expect=7e-97]; ENSMUSG00000005615, Pcyt1a, phosphate cytidylyltransferase 1, choline, alpha isoform, [RH, Score=287, Expect=1e-93]} {Dmel: FBgn0035231, Pcyt2, Phosphocholine cytidylyltransferase 2, [RH, Score=311, Expect=3e-103]} {Celegans: WBGene00017241, pcyt-1, Putative choline-phosphate cytidylyltransferase, [RH, Score=270, Expect=3e-87]} {Smed: dd_Smed_v6_4008_0_1, dd_Smed_v6_4008_0_1, [RH, Score=331, Expect=2e-112]} {RNA1509_11303, RNA1509_24906, RNA1509_3384, RNA1509_35046, RNA1509_48823} {RNA1310_17425, RNA1509_11303, RNA1509_24906, RNA1509_35046, RNA1509_48823} {RNA1509_11303, RNA1509_24906, RNA1509_35046, RNA1509_48823, RNA815_9081.1} |
| 6. | MligTC455_45262 | 189 | 3.93 | Mlig455_007101 | Neo: - Age: - |
1.785 | - | - | - | 0.950 | 0.835 | - | Mlig455_007101 {REF} {Length: 2592} {Dmel: FBgn0053519, Unc-89, [Score=50.8, Expect=4e-06]} {Smed: dd_Smed_v6_5091_0_1, dd_Smed_v6_5091_0_1, [Score=137, Expect=2e-36]} {RNA1509_54868} {RNA1310_9306} {RNA815_2941.1} | |
| 7. | MligTC455_20047 | 1050 | 21.87 | Mlig455_006587, Mlig455_006748 | Neo: - Age: - Region-enriched R4: 2.085/0.00201 |
CASP3 | 1.778 | - | 0.813 | - | 0.965 | - | - | Mlig455_006587 {REF} {Length: 2381} {TRANSSPLICED} {Pfam: Caspase domain [PF00656.24, score=117.2]} {Human: ENSG00000164305, CASP3, caspase 3, [Score=210, Expect=1e-65]; ENSG00000165806, CASP7, caspase 7, [Score=204, Expect=6e-63]} {Mouse: ENSMUSG00000031628, Casp3, caspase 3, [Score=205, Expect=8e-64]; ENSMUSG00000025076, Casp7, caspase 7, [Score=201, Expect=7e-62]} {Dmel: FBgn0010501, Dcp-1, Death caspase-1, [RH, Score=189, Expect=2e-57]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=132, Expect=5e-36]} {Smed: dd_Smed_v6_4986_0_1, dd_Smed_v6_4986_0_1, [RH, Score=174, Expect=3e-52]} {RNA1509_21320, RNA1509_30446, RNA1509_55118} {RNA1310_15341.2, RNA1509_21320, RNA1509_30446, RNA1509_55118} {RNA1509_21320, RNA1509_30446, RNA1509_55118, RNA815_6492} Mlig455_006748 {REF} {Length: 1773} {TRANSSPLICED} {Pfam: Caspase domain [PF00656.24, score=117.2]} {Human: ENSG00000164305, CASP3, caspase 3, [Score=210, Expect=1e-65]; ENSG00000165806, CASP7, caspase 7, [Score=204, Expect=5e-63]} {Mouse: ENSMUSG00000031628, Casp3, caspase 3, [Score=205, Expect=8e-64]; ENSMUSG00000025076, Casp7, caspase 7, [Score=201, Expect=8e-62]} {Dmel: FBgn0010501, Dcp-1, Death caspase-1, [RH, Score=189, Expect=2e-57]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=132, Expect=4e-36]} {Smed: dd_Smed_v6_4986_0_1, dd_Smed_v6_4986_0_1, [RH, Score=174, Expect=3e-52]} {RNA1509_39221, RNA1509_55118} {RNA1310_15341.2, RNA1509_39221} {RNA1509_39221, RNA815_6492} |
| 8. | MligTC455_37964 | 3298 | 68.72 | Mlig455_056045 | Neo: - Age: logFC(26M/2M)=1.465 |
HSD17B4 | 1.75 | - | - | - | 0.799 | 0.951 | - | Mlig455_056045 {REF} {Length: 2688} {Pfam: short chain dehydrogenase [PF00106.27, score=134.8]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=112.0]; MaoC like domain [PF01575.21, score=101.4]; SCP-2 sterol transfer family [PF02036.19, score=70.6]; KR domain [PF08659.12, score=53.8]} {Human: ENSG00000133835, HSD17B4, hydroxysteroid 17-beta dehydrogenase 4, [RH, Score=810, Expect=0.0]} {Mouse: ENSMUSG00000024507, Hsd17b4, hydroxysteroid (17-beta) dehydrogenase 4, [RH, Score=781, Expect=0.0]} {Dmel: FBgn0030731, Mfe2, peroxisomal Multifunctional enzyme type 2, [RH, Score=595, Expect=0.0]} {Celegans: WBGene00000991, dhs-28, DeHydrogenases, Short chain, [RH, Score=358, Expect=1e-116]} {Smed: dd_Smed_v6_5867_0_1, dd_Smed_v6_5867_0_1, [RH, Score=605, Expect=0.0]} {RNA1509_9012} {RNA1310_590.1} {RNA815_2204} |
Berezikov Lab - 2020-2021 © ERIBA