Data search
Results for MligTC455_19754
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_19754 | 518 | 10.78 | Mlig455_020325 | Neo: Irradiation Age: - Region-enriched R5: 1.078/0.01210 |
CCDC8 | Mlig455_020325 {REF} {Length: 3980} {TRANSSPLICED} {Pfam: Tudor domain [PF00567.26, score=92.0]; Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=19.2]} {Human: ENSG00000169515, CCDC8, coiled-coil domain containing 8, [Score=53.5, Expect=2e-06]} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=50.4, Expect=1e-05]} {RNA1509_21322, RNA1509_32588} {RNA1310_2858, RNA1509_21322, RNA1509_32588} {RNA1509_21322, RNA1509_32588, RNA815_5261} |
Cumulative graph for MligTC455_19754
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.724 | 3.871 | 0.53927 | 1.00000 | |
| RegionR2 | 0.209 | 3.871 | 0.70519 | 1.00000 | |
| RegionR3 | -0.608 | 3.871 | 0.17123 | 0.69720 | |
| RegionR4 | -0.401 | 3.871 | 0.39515 | 0.72187 | |
| RegionR5 | 1.078 | 3.871 | 0.00124 | 0.01210 | |
| RegionR6 | 0.106 | 3.871 | 0.80149 | 1.00000 | |
| RegionR7 | -0.098 | 3.871 | 0.87535 | 1.00000 | |
| RegionR8 | 0.438 | 3.871 | 0.55664 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.912 | 3.871 | 0.22487 | 0.95604 | |
| RegenerationR2 | 0.74 | 3.871 | 0.08207 | 0.46101 | |
| RegenerationR3 | 1.272 | 3.871 | 0.00885 | 0.17206 | |
| RegenerationR4 | 0.36 | 3.871 | 0.43594 | 0.83442 | |
| RegenerationR5 | 0.117 | 3.871 | 0.76211 | 0.97616 | |
| RegenerationR6 | 0.21 | 3.871 | 0.66481 | 0.90596 | |
| RegenerationBL | 0.499 | 3.871 | 0.39602 | 0.76483 | |
| RegenerationTP | 0.08 | 3.871 | 0.90645 | 1.00000 |
Genes with expression patterns similar to MligTC455_19754
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_19754 | 518 | 10.78 | Mlig455_020325 | Neo: Irradiation Age: - Region-enriched R5: 1.078/0.01210 |
CCDC8 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_020325 {REF} {Length: 3980} {TRANSSPLICED} {Pfam: Tudor domain [PF00567.26, score=92.0]; Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=19.2]} {Human: ENSG00000169515, CCDC8, coiled-coil domain containing 8, [Score=53.5, Expect=2e-06]} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=50.4, Expect=1e-05]} {RNA1509_21322, RNA1509_32588} {RNA1310_2858, RNA1509_21322, RNA1509_32588} {RNA1509_21322, RNA1509_32588, RNA815_5261} |
| 2. | MligTC455_46154 | 1268 | 26.43 | Mlig455_037558, Mlig455_057319 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.248/0.00494 |
MSH2 | 2.501 | - | - | 0.747 | - | 0.802 | 0.952 | Mlig455_037558 {REF} {Length: 3167} {TRANSSPLICED} {Pfam: MutS domain V [PF00488.23, score=246.6]; MutS domain III [PF05192.20, score=113.4]; MutS family domain IV [PF05190.20, score=57.1]; MutS domain II [PF05188.19, score=21.6]} {Human: ENSG00000095002, MSH2, mutS homolog 2, [RH, Score=624, Expect=0.0]} {Mouse: ENSMUSG00000024151, Msh2, mutS homolog 2, [RH, Score=610, Expect=0.0]} {Dmel: FBgn0015546, spel1, spellchecker1, [RH, Score=542, Expect=1e-179]} {Celegans: WBGene00003418, msh-2, MSH (MutS Homolog) family, [RH, Score=397, Expect=6e-125]} {Smed: dd_Smed_v6_11434_0_1, dd_Smed_v6_11434_0_1, [RH, Score=513, Expect=4e-169]} {RNA1509_7318} {RNA1310_4696.1} {RNA815_1447} Mlig455_057319 {REF} {Length: 3167} {TRANSSPLICED} {Pfam: MutS domain V [PF00488.23, score=246.6]; MutS domain III [PF05192.20, score=113.1]; MutS family domain IV [PF05190.20, score=57.1]; MutS domain II [PF05188.19, score=21.6]} {Human: ENSG00000095002, MSH2, mutS homolog 2, [RH, Score=623, Expect=0.0]} {Mouse: ENSMUSG00000024151, Msh2, mutS homolog 2, [RH, Score=608, Expect=0.0]} {Dmel: FBgn0015546, spel1, spellchecker1, [RH, Score=544, Expect=2e-180]} {Celegans: WBGene00003418, msh-2, MSH (MutS Homolog) family, [RH, Score=399, Expect=1e-125]} {Smed: dd_Smed_v6_11434_0_1, dd_Smed_v6_11434_0_1, [RH, Score=514, Expect=2e-169]} {RNA1509_7318} {RNA1310_4696.1, RNA1509_7318} {RNA1509_7318, RNA815_1447} |
| 3. | MligTC455_43030 | 1590 | 33.13 | Mlig455_022235, Mlig455_022252 | Neo: - Age: - Region-enriched R5: 1.254/0.00017 |
ALG9 | 1.771 | - | - | - | - | 0.807 | 0.964 | Mlig455_022235 {REF} {Length: 1860} {TRANSSPLICED} {Pfam: Alg9-like mannosyltransferase family [PF03901.19, score=268.4]} {Human: ENSG00000086848, ALG9, ALG9, alpha-1,2-mannosyltransferase, [RH, Score=338, Expect=5e-109]; ENSG00000258529, AP001781.2, novel protein, [RH, Score=337, Expect=4e-106]} {Mouse: ENSMUSG00000032059, Alg9, asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase), [RH, Score=340, Expect=6e-110]} {Dmel: FBgn0039293, CG11851, [RH, Score=323, Expect=3e-103]} {Celegans: WBGene00007556, C14A4.3, Putative glycosyltransferase C14A4.3, [RH, Score=320, Expect=1e-102]} {Smed: dd_Smed_v6_8172_0_1, dd_Smed_v6_8172_0_1, [RH, Score=363, Expect=9e-120]} {RNA1509_58906} {RNA1310_14741} {RNA815_5743} Mlig455_022252 {REF} {Length: 1864} {TRANSSPLICED} {Pfam: Alg9-like mannosyltransferase family [PF03901.19, score=268.3]} {Human: ENSG00000086848, ALG9, ALG9, alpha-1,2-mannosyltransferase, [RH, Score=337, Expect=2e-108]; ENSG00000258529, AP001781.2, novel protein, [RH, Score=336, Expect=2e-105]} {Mouse: ENSMUSG00000032059, Alg9, asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase), [RH, Score=340, Expect=9e-110]} {Dmel: FBgn0039293, CG11851, [RH, Score=323, Expect=2e-103]} {Celegans: WBGene00007556, C14A4.3, Putative glycosyltransferase C14A4.3, [RH, Score=320, Expect=2e-102]} {Smed: dd_Smed_v6_8172_0_1, dd_Smed_v6_8172_0_1, [RH, Score=364, Expect=3e-120]} {RNA1509_47138, RNA1509_49241, RNA1509_58906} {RNA1310_14741, RNA1509_47138, RNA1509_49241, RNA1509_58906} {RNA1509_47138, RNA1509_49241, RNA1509_58906, RNA815_5743} |
| 4. | MligTC455_41574 | 944 | 19.66 | Mlig455_030799 | Neo: Irradiation Age: Down-Up-Down, logFC(26M/2M)=0.710 Region-enriched R5: 3.072/0.00000 |
1.686 | 0.959 | - | 0.727 | - | - | - | Mlig455_030799 {REF} {Length: 2009} {TRANSSPLICED} {Pfam: DNA polymerase subunit Cdc27 [PF09507.12, score=34.7]} {RNA1509_41902} {RNA1310_13885} {RNA815_5435.1} | |
| 5. | MligTC455_38081 | 291 | 6.07 | Mlig455_033767 | Neo: - Age: - Region-enriched R5: 2.060/0.00325 |
NOSTRIN | 0.967 | - | - | - | - | - | 0.967 | Mlig455_033767 {REF} {Length: 3179} {TRANSSPLICED} {Pfam: Variant SH3 domain [PF14604.8, score=60.2]; SH3 domain [PF00018.30, score=58.8]; Fes/CIP4, and EFC/F-BAR homology domain [PF00611.25, score=43.2]; Variant SH3 domain [PF07653.19, score=40.4]} {Human: ENSG00000163072, NOSTRIN, nitric oxide synthase trafficking, [RH, Score=153, Expect=3e-39]} {Mouse: ENSMUSG00000034738, Nostrin, nitric oxide synthase trafficker, [RH, Score=133, Expect=2e-32]} {Dmel: FBgn0259734, Nost, Nostrin, [RH, Score=239, Expect=2e-66]} {Celegans: WBGene00012891, sorb-1, SORBin homolog, [Score=65.5, Expect=7e-11]} {Smed: dd_Smed_v6_4715_0_3, dd_Smed_v6_4715_0_3, [RH, Score=244, Expect=5e-72]} {RNA1509_18969} {RNA1310_11383.1, RNA1509_18969} {RNA1509_18969, RNA815_7401} |
| 6. | MligTC455_49437 | 703 | 14.65 | Mlig455_002016, Mlig455_002106, Mlig455_002215 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.496 Region-enriched R5: 1.589/0.00401 |
SHQ1 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_002016 {REF} {Length: 1510} {TRANSSPLICED} {Pfam: SHQ1 protein [PF04925.17, score=100.0]} {Human: ENSG00000144736, SHQ1, SHQ1, H/ACA ribonucleoprotein assembly factor, [RH, Score=124, Expect=4e-30]} {Mouse: ENSMUSG00000035378, Shq1, SHQ1 homolog (S. cerevisiae), [RH, Score=112, Expect=2e-26]} {Celegans: WBGene00021655, Y48A5A.1, Protein SHQ1 homolog, [RH, Score=110, Expect=2e-26]} {RNA1509_46416} {RNA1310_26917.1} {RNA815_38552} Mlig455_002106 {REF} {Length: 1511} {TRANSSPLICED} {Pfam: SHQ1 protein [PF04925.17, score=100.1]} {Human: ENSG00000144736, SHQ1, SHQ1, H/ACA ribonucleoprotein assembly factor, [RH, Score=124, Expect=3e-30]} {Mouse: ENSMUSG00000035378, Shq1, SHQ1 homolog (S. cerevisiae), [RH, Score=113, Expect=1e-26]} {Celegans: WBGene00021655, Y48A5A.1, Protein SHQ1 homolog, [RH, Score=109, Expect=5e-26]} {RNA1509_46416} {RNA1310_26917.1, RNA1509_46416} {RNA1509_46416, RNA815_38552} Mlig455_002215 {REF} {Length: 1510} {TRANSSPLICED} {Pfam: SHQ1 protein [PF04925.17, score=100.1]} {Human: ENSG00000144736, SHQ1, SHQ1, H/ACA ribonucleoprotein assembly factor, [RH, Score=124, Expect=3e-30]} {Mouse: ENSMUSG00000035378, Shq1, SHQ1 homolog (S. cerevisiae), [RH, Score=113, Expect=1e-26]} {Celegans: WBGene00021655, Y48A5A.1, Protein SHQ1 homolog, [RH, Score=109, Expect=5e-26]} {RNA1509_46416} {RNA1310_26917.1} {RNA815_38552} |
| 7. | MligTC455_44014 | 525 | 10.94 | Mlig455_055228 | Neo: Int S/G2/M Age: Down-Up-Up |
U2SURP | 0.955 | - | - | 0.955 | - | - | - | Mlig455_055228 {REF} {Length: 2648} {TRANSSPLICED} {Pfam: Surp module [PF01805.22, score=51.3]; CID domain [PF04818.15, score=46.2]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=45.7]; RNA recognition motif [PF16367.7, score=20.9]} {Human: ENSG00000163714, U2SURP, U2 snRNP associated SURP domain containing, [RH, Score=407, Expect=2e-127]} {Mouse: ENSMUSG00000032407, U2surp, U2 snRNP-associated SURP domain containing, [RH, Score=409, Expect=4e-128]} {Dmel: FBgn0034572, CG9346, [RH, Score=379, Expect=9e-118]} {Celegans: WBGene00015581, C07H6.4, [RH, Score=315, Expect=4e-94]} {Smed: dd_Smed_v6_3029_0_1, dd_Smed_v6_3029_0_1, [RH, Score=476, Expect=2e-155]} {RNA1509_14951} {RNA1310_6191, RNA1509_14951} {RNA1509_14951, RNA815_1206.1} |
| 8. | MligTC455_21671 | 433 | 9.02 | Mlig455_034206 | Neo: Irradiation Age: - Region-enriched R5: 1.128/0.02068 |
PRR9 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_034206 {REF} {Length: 2697} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=50.1, Expect=3e-07]} {Celegans: WBGene00018026, F35A5.4, [Score=63.5, Expect=6e-11]} {RNA1509_59164} {RNA1310_45940} {RNA815_9330.1} |