Data search
Results for MligTC455_19810
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_19810 | 7 | 0.15 | Mlig455_022745 | Neo: - Age: - |
Mlig455_022745 {REF} {Length: 2202} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_19205} {RNA1310_78996} {RNA815_47382} |
Cumulative graph for MligTC455_19810
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | - | - | - | - | |
| RegionR2 | - | - | - | - | |
| RegionR3 | - | - | - | - | |
| RegionR4 | - | - | - | - | |
| RegionR5 | - | - | - | - | |
| RegionR6 | - | - | - | - | |
| RegionR7 | - | - | - | - | |
| RegionR8 | - | - | - | - |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | - | - | - | - | |
| RegenerationR2 | - | - | - | - | |
| RegenerationR3 | - | - | - | - | |
| RegenerationR4 | - | - | - | - | |
| RegenerationR5 | - | - | - | - | |
| RegenerationR6 | - | - | - | - | |
| RegenerationBL | - | - | - | - | |
| RegenerationTP | - | - | - | - |
Genes with expression patterns similar to MligTC455_19810
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_19810 | 7 | 0.15 | Mlig455_022745 | Neo: - Age: - |
1 | - | - | - | - | 1.000 | - | Mlig455_022745 {REF} {Length: 2202} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_19205} {RNA1310_78996} {RNA815_47382} | |
| 2. | MligTC455_10996 | 431 | 8.99 | Mlig455_008169 | Neo: Germline Age: - |
0.969 | - | - | - | - | 0.969 | - | Mlig455_008169 {REF} {Length: 1152} {RNA1509_10082} {RNA1310_36137.1} {RNA815_19707.1} | |
| 3. | MligTC455_21775 | 61 | 1.27 | Mlig455_028143 | Neo: - Age: - Region-enriched R4: 6.480/0.00013 |
0.969 | - | - | - | - | 0.969 | - | Mlig455_028143 {REF} {Length: 1724} {RNA1509_42567} {RNA1310_29963} {RNA815_28272} | |
| 4. | MligTC455_11145 | 126 | 2.62 | Mlig455_059502 | Neo: Germline Age: - Region-enriched R4: 4.489/0.00599 |
0.963 | - | - | - | - | 0.963 | - | Mlig455_059502 {REF} {Length: 843} {RNA1509_33755, RNA1509_47692} {RNA1310_43967.2, RNA1509_33755, RNA1509_47692} {RNA1509_33755, RNA1509_47692, RNA815_13783} | |
| 5. | MligTC455_26247 | 188 | 3.92 | Mlig455_000904, Mlig455_056687 | Neo: - Age: - Region-specific R4: 6.556 Region-enriched R4: 3.288/0.00515 |
0.958 | - | - | - | - | 0.958 | - | Mlig455_000904 {REF} {Length: 2654} {Pfam: Retrotransposon gag protein [PF03732.19, score=21.6]} {RNA1509_42532} {RNA1310_13513.1} {RNA815_11366.1} Mlig455_056687 {REF} {Length: 2662} {Pfam: Retrotransposon gag protein [PF03732.19, score=21.6]} {RNA1509_42532, RNA1509_54014} {RNA1310_13513.1, RNA1509_54014} {RNA1509_54014, RNA815_11366.1} |
|
| 6. | MligTC455_52398 | 57 | 1.19 | Mlig455_025409 | Neo: - Age: Up-Down-Down Region-enriched R4: 3.224/0.00756 |
PRRX1 | 0.958 | - | - | - | - | 0.958 | - | Mlig455_025409 {REF} {Length: 1857} {Pfam: Homeodomain [PF00046.31, score=78.5]} {Human: ENSG00000116132, PRRX1, paired related homeobox 1, [RH, Score=101, Expect=2e-24]; ENSG00000167157, PRRX2, paired related homeobox 2, [RH, Score=97.8, Expect=5e-23]} {Mouse: ENSMUSG00000026586, Prrx1, paired related homeobox 1, [RH, Score=101, Expect=1e-24]; ENSMUSG00000039476, Prrx2, paired related homeobox 2, [RH, Score=98.2, Expect=2e-23]} {Dmel: FBgn0034821, CG9876, [RH, Score=105, Expect=4e-26]} {Celegans: WBGene00044330, alr-1, AristaLess (Drosophila homeodomain) Related, [Score=100, Expect=7e-24]} {Smed: dd_Smed_v6_29211_0_1, dd_Smed_v6_29211_0_1, [Score=100, Expect=1e-23]} {RNA1509_43894} {RNA1310_15380, RNA1509_43894} {RNA1509_43894, RNA815_19462} |
Berezikov Lab - 2020-2021 © ERIBA