TomoSeq data search

Data search

Results for MligTC455_19811

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_19811	24	0.50	Mlig455_000476	Neo: - Age: -		Mlig455_000476 {REF} {Length: 1935} {NoTransDecoderORF} {RNA1509_18532} {RNA1310_1112.1} {RNA815_23034.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_19811

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.352	0.849	0.99998	1.00000
RegionR2	-0.536	0.849	0.99993	1.00000
RegionR3	0.112	0.849	0.99999	1.00000
RegionR4	0.732	0.849	1.00000	1.00000
RegionR5	0.421	0.849	1.00000	1.00000
RegionR6	0.129	0.849	0.99999	1.00000
RegionR7	-0.198	0.849	1.00000	1.00000
RegionR8	-0.308	0.849	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.277	0.849	1.00000	1.00000
RegenerationR2	3.736	0.849	0.00807	0.14322
RegenerationR3	2.648	0.849	0.14282	0.56909
RegenerationR4	2.63	0.849	0.09484	0.47941
RegenerationR5	3.849	0.849	0.01232	0.19562
RegenerationR6	3.11	0.849	0.12506	0.43447
RegenerationBL	3.085	0.849	0.16640	0.48923
RegenerationTP	2.931	0.849	0.32869	0.77311

Genes with expression patterns similar to MligTC455_19811

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_19811	24	0.5	Mlig455_000476	Neo: - Age: -		1	-	-	-	1.000	-	-	Mlig455_000476 {REF} {Length: 1935} {NoTransDecoderORF} {RNA1509_18532} {RNA1310_1112.1} {RNA815_23034.1}
2.	MligTC455_19632	59	1.22	Mlig455_042807	Neo: - Age: Up-Down-Up		0.966	-	-	-	0.966	-	-	Mlig455_042807 {REF} {Length: 793} {NoTransDecoderORF} {RNA1509_32813} {RNA1310_51673, RNA1509_32813} {RNA1509_32813, RNA815_25910}
3.	MligTC455_15446	84	1.76	Mlig455_049757	Neo: Irradiation Age: logFC(26M/2M)=0.275 Region-enriched R5: 3.436/0.00161	ESRRG	0.955	-	-	-	0.955	-	-	Mlig455_049757 {REF} {Length: 2879} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=80.9]} {Human: ENSG00000196482, ESRRG, estrogen related receptor gamma, [Score=85.1, Expect=4e-19]; ENSG00000116833, NR5A2, nuclear receptor subfamily 5 group A member 2, [Score=83.2, Expect=2e-18]; ENSG00000119715, ESRRB, estrogen related receptor beta, [Score=82.8, Expect=3e-18]; ENSG00000173153, ESRRA, estrogen related receptor alpha, [Score=82.8, Expect=2e-18]; ENSG00000175745, NR2F1, nuclear receptor subfamily 2 group F member 1, [Score=82.4, Expect=2e-18]; ENSG00000185551, NR2F2, nuclear receptor subfamily 2 group F member 2, [Score=82.0, Expect=4e-18]} {Mouse: ENSMUSG00000026610, Esrrg, estrogen-related receptor gamma, [Score=85.1, Expect=3e-19]; ENSMUSG00000024955, Esrra, estrogen related receptor, alpha, [Score=83.2, Expect=1e-18]; ENSMUSG00000069171, Nr2f1, nuclear receptor subfamily 2, group F, member 1, [Score=82.4, Expect=2e-18]; ENSMUSG00000030551, Nr2f2, nuclear receptor subfamily 2, group F, member 2, [Score=82.0, Expect=3e-18]; ENSMUSG00000021255, Esrrb, estrogen related receptor, beta, [Score=82.0, Expect=4e-18]; ENSMUSG00000026398, Nr5a2, nuclear receptor subfamily 5, group A, member 2, [Score=81.6, Expect=5e-18]; ENSMUSG00000023034, Nr4a1, nuclear receptor subfamily 4, group A, member 1, [Score=81.6, Expect=6e-18]} {Dmel: FBgn0035849, ERR, estrogen-related receptor, [Score=84.3, Expect=4e-19]} {Celegans: WBGene00003678, nhr-88, Nuclear Hormone Receptor family, [Score=77.4, Expect=1e-17]} {Smed: dd_Smed_v6_33286_0_2, dd_Smed_v6_33286_0_2, [Score=88.6, Expect=2e-21]} {RNA1509_22231, RNA1509_56454} {RNA1310_7459.2, RNA1509_56454} {RNA1509_56454, RNA815_5691.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_19811

0.5

Mlig455_000476

Neo: -

Age: -

1.000

Mlig455_000476 {REF} {Length: 1935} {NoTransDecoderORF} {RNA1509_18532} {RNA1310_1112.1} {RNA815_23034.1}

MligTC455_19632

1.22

Mlig455_042807

Neo: -

Age: Up-Down-Up

0.966

Mlig455_042807 {REF} {Length: 793} {NoTransDecoderORF} {RNA1509_32813} {RNA1310_51673, RNA1509_32813} {RNA1509_32813, RNA815_25910}

MligTC455_15446

1.76

Mlig455_049757

Neo: Irradiation

Age: logFC(26M/2M)=0.275

Region-enriched R5: 3.436/0.00161

ESRRG

0.955

Mlig455_049757 {REF} {Length: 2879} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=80.9]} {Human: ENSG00000196482, ESRRG, estrogen related receptor gamma, [Score=85.1, Expect=4e-19]; ENSG00000116833, NR5A2, nuclear receptor subfamily 5 group A member 2, [Score=83.2, Expect=2e-18]; ENSG00000119715, ESRRB, estrogen related receptor beta, [Score=82.8, Expect=3e-18]; ENSG00000173153, ESRRA, estrogen related receptor alpha, [Score=82.8, Expect=2e-18]; ENSG00000175745, NR2F1, nuclear receptor subfamily 2 group F member 1, [Score=82.4, Expect=2e-18]; ENSG00000185551, NR2F2, nuclear receptor subfamily 2 group F member 2, [Score=82.0, Expect=4e-18]} {Mouse: ENSMUSG00000026610, Esrrg, estrogen-related receptor gamma, [Score=85.1, Expect=3e-19]; ENSMUSG00000024955, Esrra, estrogen related receptor, alpha, [Score=83.2, Expect=1e-18]; ENSMUSG00000069171, Nr2f1, nuclear receptor subfamily 2, group F, member 1, [Score=82.4, Expect=2e-18]; ENSMUSG00000030551, Nr2f2, nuclear receptor subfamily 2, group F, member 2, [Score=82.0, Expect=3e-18]; ENSMUSG00000021255, Esrrb, estrogen related receptor, beta, [Score=82.0, Expect=4e-18]; ENSMUSG00000026398, Nr5a2, nuclear receptor subfamily 5, group A, member 2, [Score=81.6, Expect=5e-18]; ENSMUSG00000023034, Nr4a1, nuclear receptor subfamily 4, group A, member 1, [Score=81.6, Expect=6e-18]} {Dmel: FBgn0035849, ERR, estrogen-related receptor, [Score=84.3, Expect=4e-19]} {Celegans: WBGene00003678, nhr-88, Nuclear Hormone Receptor family, [Score=77.4, Expect=1e-17]} {Smed: dd_Smed_v6_33286_0_2, dd_Smed_v6_33286_0_2, [Score=88.6, Expect=2e-21]} {RNA1509_22231, RNA1509_56454} {RNA1310_7459.2, RNA1509_56454} {RNA1509_56454, RNA815_5691.1}