Data search
Results for MligTC455_19863
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_19863 | 123 | 2.55 | Mlig455_024125 | Neo: Irradiation Age: Up-Down-Up |
Mlig455_024125 {REF} {Length: 2304} {Pfam: M-phase-specific PLK1-interacting protein [PF15502.8, score=29.0]} {RNA1509_10545, RNA1509_54817} {RNA1310_33995, RNA1509_54817} {RNA1509_54817, RNA815_28759} |
Cumulative graph for MligTC455_19863
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.366 | 2.244 | 0.84495 | 1.00000 | |
| RegionR2 | 0.527 | 2.244 | 0.56133 | 0.92338 | |
| RegionR3 | -0.371 | 2.244 | 0.61636 | 1.00000 | |
| RegionR4 | 0.08 | 2.244 | 0.91812 | 1.00000 | |
| RegionR5 | 1.244 | 2.244 | 0.02342 | 0.10854 | |
| RegionR6 | 0.295 | 2.244 | 0.66926 | 1.00000 | |
| RegionR7 | -1.163 | 2.244 | 0.30861 | 0.94268 | |
| RegionR8 | -0.978 | 2.244 | 0.48002 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.237 | 2.244 | 0.48558 | 1.00000 | |
| RegenerationR2 | 0.078 | 2.244 | 0.91582 | 1.00000 | |
| RegenerationR3 | 0.668 | 2.244 | 0.44084 | 0.82755 | |
| RegenerationR4 | 0.098 | 2.244 | 0.90780 | 1.00000 | |
| RegenerationR5 | -0.566 | 2.244 | 0.43113 | 0.81871 | |
| RegenerationR6 | 0.846 | 2.244 | 0.29145 | 0.64187 | |
| RegenerationBL | -0.317 | 2.244 | 0.82691 | 1.00000 | |
| RegenerationTP | 1.235 | 2.244 | 0.33426 | 0.77847 |
Genes with expression patterns similar to MligTC455_19863
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_19863 | 123 | 2.55 | Mlig455_024125 | Neo: Irradiation Age: Up-Down-Up |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_024125 {REF} {Length: 2304} {Pfam: M-phase-specific PLK1-interacting protein [PF15502.8, score=29.0]} {RNA1509_10545, RNA1509_54817} {RNA1310_33995, RNA1509_54817} {RNA1509_54817, RNA815_28759} | |
| 2. | MligTC455_26577 | 260 | 5.42 | Mlig455_013861 | Neo: Irradiation Age: Down-Up-Down Region-enriched R5: 2.870/0.00003 |
SEPT6 | 1.724 | 0.952 | 0.772 | - | - | - | - | Mlig455_013861 {REF} {Length: 1476} {Pfam: Septin [PF00735.20, score=141.1]} {Human: ENSG00000125354, SEPT6, septin 6, [Score=117, Expect=4e-29]} {Mouse: ENSMUSG00000058013, Sept11, septin 11, [Score=111, Expect=5e-27]; ENSMUSG00000050379, Sept6, septin 6, [Score=111, Expect=5e-27]; ENSMUSG00000019917, Sept10, septin 10, [Score=109, Expect=3e-26]} {Dmel: FBgn0026361, Sep5, Septin 5, [Score=112, Expect=8e-28]} {Celegans: WBGene00006793, unc-59, [Score=94.4, Expect=3e-21]} {Smed: dd_Smed_v6_4007_0_1, dd_Smed_v6_4007_0_1, [Score=96.7, Expect=3e-22]} {RNA1509_35287} {RNA1310_24126.1, RNA1509_35287} {RNA1509_35287, RNA815_25404} |
| 3. | MligTC455_20889 | 54 | 1.12 | Mlig455_005239 | Neo: - Age: - |
0.991 | - | - | 0.991 | - | - | - | Mlig455_005239 {REF} {Length: 1708} {NoTransDecoderORF} {RNA1509_46145} {RNA1310_42249} {RNA815_5444.1} | |
| 4. | MligTC455_42727 | 115 | 2.39 | Mlig455_028231 | Neo: - Age: Down-Up-Down Region-enriched R5: 1.994/0.02137 |
VPS54 | 0.972 | - | - | 0.972 | - | - | - | Mlig455_028231 {REF} {Length: 3695} {TRANSSPLICED} {Pfam: Vacuolar-sorting protein 54, of GARP complex [PF10475.11, score=59.7]} {Human: ENSG00000143952, VPS54, VPS54, GARP complex subunit, [Score=217, Expect=4e-58]} {Mouse: ENSMUSG00000020128, Vps54, VPS54 GARP complex subunit, [Score=214, Expect=2e-57]} {Dmel: FBgn0011232, scat, scattered, [Score=268, Expect=3e-76]} {Celegans: WBGene00006934, vps-54, Vacuolar protein sorting-associated protein 54, [RH, Score=174, Expect=2e-44]} {Smed: dd_Smed_v6_10319_0_1, dd_Smed_v6_10319_0_1, [Score=268, Expect=4e-76]} {RNA1509_9367} {RNA1310_5688.1} {RNA815_23566} |
| 5. | MligTC455_27817 | 125 | 2.61 | Mlig455_024260 | Neo: - Age: - |
0.967 | - | - | 0.967 | - | - | - | Mlig455_024260 {REF} {Length: 3633} {Pfam: Zinc knuckle [PF00098.25, score=21.3]} {RNA1509_6137} {RNA1310_131.1} {RNA815_52.1} | |
| 6. | MligTC455_51387 | 301 | 6.27 | Mlig455_041337, Mlig455_056224 | Neo: Irradiation Age: Up-Down-Down |
0.964 | - | - | - | - | 0.964 | - | Mlig455_041337 {REF} {Length: 3729} {TRANSSPLICED} {RNA1509_34326, RNA1509_54833} {RNA1310_25018.1, RNA1509_34326, RNA1509_54833} {RNA1509_34326, RNA1509_54833, RNA815_29663} Mlig455_056224 {REF} {Length: 3928} {TRANSSPLICED} {RNA1509_34326} {RNA1310_25018.1} {RNA815_29663} |
|
| 7. | MligTC455_24044 | 321 | 6.69 | Mlig455_042095 | Neo: - Age: logFC(26M/2M)=0.284 |
RAB11A | 0.959 | - | - | - | - | 0.959 | - | Mlig455_042095 {REF} {Length: 2333} {Pfam: Ras family [PF00071.24, score=185.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=112.7]; ADP-ribosylation factor family [PF00025.23, score=44.9]; 50S ribosome-binding GTPase [PF01926.25, score=27.9]; Signal recognition particle receptor beta subunit [PF09439.12, score=21.9]; Ethanolamine utilisation - propanediol utilisation [PF10662.11, score=20.4]; Elongation factor Tu GTP binding domain [PF00009.29, score=18.9]} {Human: ENSG00000103769, RAB11A, RAB11A, member RAS oncogene family, [Score=213, Expect=2e-69]; ENSG00000185236, RAB11B, RAB11B, member RAS oncogene family, [Score=206, Expect=7e-67]} {Mouse: ENSMUSG00000004771, Rab11a, RAB11A, member RAS oncogene family, [Score=213, Expect=1e-69]; ENSMUSG00000077450, Rab11b, RAB11B, member RAS oncogene family, [Score=206, Expect=4e-67]} {Dmel: FBgn0015790, Rab11, [Score=213, Expect=5e-70]} {Celegans: WBGene00004274, rab-11.1, Ras-related protein rab-11.1, [Score=209, Expect=2e-68]} {Smed: dd_Smed_v6_867_0_1, dd_Smed_v6_867_0_1, [Score=200, Expect=7e-65]} {RNA1509_31963, RNA1509_52120} {RNA1310_28163, RNA1509_31963, RNA1509_52120} {RNA1509_31963, RNA1509_52120, RNA815_20566} |
| 8. | MligTC455_16774 | 54 | 1.13 | Mlig455_056048 | Neo: - Age: - |
FBXL7 | 0.954 | - | - | 0.954 | - | - | - | Mlig455_056048 {REF} {Length: 2430} {Pfam: F-box-like [PF12937.9, score=49.8]; F-box domain [PF00646.35, score=35.9]} {Human: ENSG00000183580, FBXL7, F-box and leucine rich repeat protein 7, [Score=68.9, Expect=8e-12]} {Mouse: ENSMUSG00000043556, Fbxl7, F-box and leucine-rich repeat protein 7, [Score=69.3, Expect=4e-12]} {Dmel: FBgn0039667, CG2010, [RH, Score=463, Expect=2e-159]} {Celegans: WBGene00020884, T28B4.1, [RH, Score=401, Expect=7e-135]} {Smed: dd_Smed_v6_3719_0_1, dd_Smed_v6_3719_0_1, [RH, Score=610, Expect=0.0]} {RNA1509_48237} {RNA1310_12967} {RNA815_5948} |
| 9. | MligTC455_35908 | 798 | 16.62 | Mlig455_029724 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 6.384 Region-enriched R4: 3.056/0.03988 |
TTLL10 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_029724 {REF} {Length: 3159} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=88.4]; YheC/D like ATP-grasp [PF14398.8, score=19.2]} {Human: ENSG00000162571, TTLL10, tubulin tyrosine ligase like 10, [Score=99.0, Expect=4e-21]} {Mouse: ENSMUSG00000029074, Ttll10, tubulin tyrosine ligase-like family, member 10, [Score=104, Expect=2e-23]} {Dmel: FBgn0052238, CG32238, [Score=69.3, Expect=3e-12]} {Celegans: WBGene00014232, ttll-4, Tubulin polyglutamylase ttll-4, [Score=52.4, Expect=6e-07]} {Smed: dd_Smed_v6_9664_0_1, dd_Smed_v6_9664_0_1, [Score=117, Expect=1e-27]} {RNA1509_19049} {RNA1310_8962} {RNA815_5112} |
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