TomoSeq data search

Data search

Results for MligTC455_19881

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_19881	267	5.57	Mlig455_022598	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.257		Mlig455_022598 {REF} {Length: 1989} {TRANSSPLICED} {Pfam: LEM domain [PF03020.17, score=30.8]} {RNA1509_16029, RNA1509_41037, RNA1509_46248} {RNA1310_16899, RNA1509_16029, RNA1509_41037, RNA1509_46248} {RNA1509_16029, RNA1509_41037, RNA1509_46248, RNA815_11023}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_19881

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.826	2.989	0.52933	1.00000
RegionR2	1.202	2.989	0.06982	0.32174
RegionR3	-0.028	2.989	0.95210	1.00000
RegionR4	-1.218	2.989	0.05596	0.20821
RegionR5	0.573	2.989	0.15900	0.41913
RegionR6	0.145	2.989	0.77342	1.00000
RegionR7	0.311	2.989	0.63568	1.00000
RegionR8	-0.158	2.989	0.87359	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-3.943	2.989	0.51223	1.00000
RegenerationR2	-1.682	2.989	0.01659	0.21102
RegenerationR3	0.377	2.989	0.55057	0.88403
RegenerationR4	0.174	2.989	0.78359	0.98207
RegenerationR5	-0.051	2.989	0.94710	1.00000
RegenerationR6	-0.771	2.989	0.30115	0.65099
RegenerationBL	-0.475	2.989	0.65706	0.99234
RegenerationTP	0.099	2.989	0.91634	1.00000

Genes with expression patterns similar to MligTC455_19881

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_19881	267	5.57	Mlig455_022598	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.257		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_022598 {REF} {Length: 1989} {TRANSSPLICED} {Pfam: LEM domain [PF03020.17, score=30.8]} {RNA1509_16029, RNA1509_41037, RNA1509_46248} {RNA1310_16899, RNA1509_16029, RNA1509_41037, RNA1509_46248} {RNA1509_16029, RNA1509_41037, RNA1509_46248, RNA815_11023}
2.	MligTC455_27450	591	12.3	Mlig455_044917	Neo: - Age: Up-Down-Up Region-enriched R5: 1.456/0.00009 Region-enriched R4: 1.141/0.04869	PPP6R3	1.659	0.709	-	-	-	-	0.950	Mlig455_044917 {REF} {Length: 4149} {TRANSSPLICED} {Pfam: SIT4 phosphatase-associated protein [PF04499.17, score=27.3]} {Human: ENSG00000110075, PPP6R3, protein phosphatase 6 regulatory subunit 3, [Score=138, Expect=4e-33]} {Mouse: ENSMUSG00000052296, Ppp6r1, protein phosphatase 6, regulatory subunit 1, [Score=139, Expect=2e-33]; ENSMUSG00000024908, Ppp6r3, protein phosphatase 6, regulatory subunit 3, [Score=139, Expect=2e-33]} {Dmel: FBgn0035688, CG10289, [Score=106, Expect=3e-23]} {Celegans: WBGene00008166, saps-1, SAPS (Phosphatase associated) domain protein, [Score=61.2, Expect=2e-09]} {Smed: dd_Smed_v6_2815_0_1, dd_Smed_v6_2815_0_1, [Score=76.3, Expect=4e-14]} {RNA1509_15946} {RNA1310_4877} {RNA815_12600.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_19881

267

5.57

Mlig455_022598

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.257

1.000

MligTC455_27450

591

12.3

Mlig455_044917

Neo: -

Age: Up-Down-Up

Region-enriched R5: 1.456/0.00009
Region-enriched R4: 1.141/0.04869

PPP6R3

1.659

0.709

0.950

Mlig455_044917 {REF} {Length: 4149} {TRANSSPLICED} {Pfam: SIT4 phosphatase-associated protein [PF04499.17, score=27.3]} {Human: ENSG00000110075, PPP6R3, protein phosphatase 6 regulatory subunit 3, [Score=138, Expect=4e-33]} {Mouse: ENSMUSG00000052296, Ppp6r1, protein phosphatase 6, regulatory subunit 1, [Score=139, Expect=2e-33]; ENSMUSG00000024908, Ppp6r3, protein phosphatase 6, regulatory subunit 3, [Score=139, Expect=2e-33]} {Dmel: FBgn0035688, CG10289, [Score=106, Expect=3e-23]} {Celegans: WBGene00008166, saps-1, SAPS (Phosphatase associated) domain protein, [Score=61.2, Expect=2e-09]} {Smed: dd_Smed_v6_2815_0_1, dd_Smed_v6_2815_0_1, [Score=76.3, Expect=4e-14]} {RNA1509_15946} {RNA1310_4877} {RNA815_12600.1}