TomoSeq data search

Data search

Results for MligTC455_19898

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_19898	991	20.64	Mlig455_021357	Neo: - Age: Up-Down-Up	CLCN3	Mlig455_021357 {REF} {Length: 3437} {TRANSSPLICED} {Pfam: Voltage gated chloride channel [PF00654.22, score=278.2]; CBS domain [PF00571.30, score=55.1]} {Human: ENSG00000109572, CLCN3, chloride voltage-gated channel 3, [Score=870, Expect=0.0]; ENSG00000073464, CLCN4, chloride voltage-gated channel 4, [Score=844, Expect=0.0]; ENSG00000171365, CLCN5, chloride voltage-gated channel 5, [Score=833, Expect=0.0]} {Mouse: ENSMUSG00000004319, Clcn3, chloride channel, voltage-sensitive 3, [Score=870, Expect=0.0]; ENSMUSG00000000605, Clcn4, chloride channel, voltage-sensitive 4, [Score=838, Expect=0.0]; ENSMUSG00000004317, Clcn5, chloride channel, voltage-sensitive 5, [Score=832, Expect=0.0]} {Dmel: FBgn0036566, ClC-c, Chloride channel-c, [Score=824, Expect=0.0]} {Celegans: WBGene00000532, clh-5, Chloride channel protein, [Score=712, Expect=0.0]} {Smed: dd_Smed_v6_4076_1_1, dd_Smed_v6_4076_1_1, [Score=761, Expect=0.0]} {RNA1509_8396} {RNA1310_2145.1} {RNA815_3521}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_19898

991

20.64

Mlig455_021357

Neo: -

Age: Up-Down-Up

CLCN3

Mlig455_021357 {REF} {Length: 3437} {TRANSSPLICED} {Pfam: Voltage gated chloride channel [PF00654.22, score=278.2]; CBS domain [PF00571.30, score=55.1]} {Human: ENSG00000109572, CLCN3, chloride voltage-gated channel 3, [Score=870, Expect=0.0]; ENSG00000073464, CLCN4, chloride voltage-gated channel 4, [Score=844, Expect=0.0]; ENSG00000171365, CLCN5, chloride voltage-gated channel 5, [Score=833, Expect=0.0]} {Mouse: ENSMUSG00000004319, Clcn3, chloride channel, voltage-sensitive 3, [Score=870, Expect=0.0]; ENSMUSG00000000605, Clcn4, chloride channel, voltage-sensitive 4, [Score=838, Expect=0.0]; ENSMUSG00000004317, Clcn5, chloride channel, voltage-sensitive 5, [Score=832, Expect=0.0]} {Dmel: FBgn0036566, ClC-c, Chloride channel-c, [Score=824, Expect=0.0]} {Celegans: WBGene00000532, clh-5, Chloride channel protein, [Score=712, Expect=0.0]} {Smed: dd_Smed_v6_4076_1_1, dd_Smed_v6_4076_1_1, [Score=761, Expect=0.0]} {RNA1509_8396} {RNA1310_2145.1} {RNA815_3521}

Cumulative graph for MligTC455_19898

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.204	4.649	0.21353	0.85442
RegionR2	0.48	4.649	0.13714	0.46016
RegionR3	-0.112	4.649	0.68222	1.00000
RegionR4	-0.396	4.649	0.21082	0.49540
RegionR5	-0.103	4.649	0.67926	1.00000
RegionR6	0.09	4.649	0.74261	1.00000
RegionR7	0.893	4.649	0.00798	0.14916
RegionR8	0.352	4.649	0.45725	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-6.736	4.649	0.11975	0.84939
RegenerationR2	0.161	4.649	0.47501	0.86038
RegenerationR3	0.138	4.649	0.61143	0.91317
RegenerationR4	-0.077	4.649	0.78193	0.98154
RegenerationR5	0.04	4.649	0.86829	1.00000
RegenerationR6	0.276	4.649	0.30995	0.65824
RegenerationBL	-0.255	4.649	0.47870	0.84412
RegenerationTP	-0.388	4.649	0.31835	0.76370

Genes with expression patterns similar to MligTC455_19898

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_19898	991	20.64	Mlig455_021357	Neo: - Age: Up-Down-Up	CLCN3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_021357 {REF} {Length: 3437} {TRANSSPLICED} {Pfam: Voltage gated chloride channel [PF00654.22, score=278.2]; CBS domain [PF00571.30, score=55.1]} {Human: ENSG00000109572, CLCN3, chloride voltage-gated channel 3, [Score=870, Expect=0.0]; ENSG00000073464, CLCN4, chloride voltage-gated channel 4, [Score=844, Expect=0.0]; ENSG00000171365, CLCN5, chloride voltage-gated channel 5, [Score=833, Expect=0.0]} {Mouse: ENSMUSG00000004319, Clcn3, chloride channel, voltage-sensitive 3, [Score=870, Expect=0.0]; ENSMUSG00000000605, Clcn4, chloride channel, voltage-sensitive 4, [Score=838, Expect=0.0]; ENSMUSG00000004317, Clcn5, chloride channel, voltage-sensitive 5, [Score=832, Expect=0.0]} {Dmel: FBgn0036566, ClC-c, Chloride channel-c, [Score=824, Expect=0.0]} {Celegans: WBGene00000532, clh-5, Chloride channel protein, [Score=712, Expect=0.0]} {Smed: dd_Smed_v6_4076_1_1, dd_Smed_v6_4076_1_1, [Score=761, Expect=0.0]} {RNA1509_8396} {RNA1310_2145.1} {RNA815_3521}
2.	MligTC455_23719	581	12.1	Mlig455_000649	Neo: - Age: -	TRIP11	0.968	-	-	-	-	0.968	-	Mlig455_000649 {REF} {Length: 5677} {TRANSSPLICED} {Pfam: Plant protein of unknown function (DUF641) [PF04859.14, score=19.8]; Syntaxin [PF00804.27, score=18.4]} {Human: ENSG00000100815, TRIP11, thyroid hormone receptor interactor 11, [RH, Score=104, Expect=7e-22]} {Mouse: ENSMUSG00000021188, Trip11, thyroid hormone receptor interactor 11, [RH, Score=107, Expect=6e-23]} {Dmel: FBgn0027287, Gmap, Golgi microtubule-associated protein, [Score=52.0, Expect=4e-06]} {Smed: dd_Smed_v6_3407_0_4, dd_Smed_v6_3407_0_4, [Score=87.4, Expect=4e-17]} {RNA1509_8227} {RNA1310_188.1, RNA1509_8227} {RNA1509_8227, RNA815_4799.1}
3.	MligTC455_37141	1927	40.15	Mlig455_024772, Mlig455_058327	Neo: - Age: -	PRKAA2	0.957	-	-	-	-	0.957	-	Mlig455_024772 {REF} {Length: 2305} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=208.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=118.8]; Adenylate sensor of SNF1-like protein kinase [PF16579.7, score=32.9]; Kinase-like [PF14531.8, score=28.7]; ABC1 atypical kinase-like domain [PF03109.18, score=22.5]} {Human: ENSG00000162409, PRKAA2, protein kinase AMP-activated catalytic subunit alpha 2, [Score=532, Expect=0.0]} {Mouse: ENSMUSG00000028518, Prkaa2, protein kinase, AMP-activated, alpha 2 catalytic subunit, [Score=522, Expect=0.0]; ENSMUSG00000050697, Prkaa1, protein kinase, AMP-activated, alpha 1 catalytic subunit, [Score=497, Expect=3e-173]} {Dmel: FBgn0023169, AMPKalpha, AMP-activated protein kinase alpha subunit, [Score=503, Expect=3e-175]} {Celegans: WBGene00020142, aak-2, 5'-AMP-activated protein kinase catalytic subunit alpha-2, [Score=476, Expect=5e-165]} {Smed: dd_Smed_v6_2538_0_1, dd_Smed_v6_2538_0_1, [Score=534, Expect=0.0]} {RNA1509_3781} {RNA1310_5604.1, RNA1509_3781} {RNA1509_3781, RNA815_2493.1} Mlig455_058327 {REF} {Length: 2308} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=208.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=118.8]; Adenylate sensor of SNF1-like protein kinase [PF16579.7, score=32.9]; Kinase-like [PF14531.8, score=28.7]; ABC1 atypical kinase-like domain [PF03109.18, score=22.5]} {Human: ENSG00000162409, PRKAA2, protein kinase AMP-activated catalytic subunit alpha 2, [Score=532, Expect=0.0]} {Mouse: ENSMUSG00000028518, Prkaa2, protein kinase, AMP-activated, alpha 2 catalytic subunit, [Score=522, Expect=0.0]; ENSMUSG00000050697, Prkaa1, protein kinase, AMP-activated, alpha 1 catalytic subunit, [Score=497, Expect=3e-173]} {Dmel: FBgn0023169, AMPKalpha, AMP-activated protein kinase alpha subunit, [Score=503, Expect=3e-175]} {Celegans: WBGene00020142, aak-2, 5'-AMP-activated protein kinase catalytic subunit alpha-2, [Score=476, Expect=5e-165]} {Smed: dd_Smed_v6_2538_0_1, dd_Smed_v6_2538_0_1, [Score=534, Expect=0.0]} {RNA1509_3781} {RNA1310_5604.1} {RNA815_2493.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_19898

991

20.64

Mlig455_021357

Neo: -

Age: Up-Down-Up

CLCN3

1.000

MligTC455_23719

581

12.1

Mlig455_000649

Neo: -

Age: -

TRIP11

0.968

Mlig455_000649 {REF} {Length: 5677} {TRANSSPLICED} {Pfam: Plant protein of unknown function (DUF641) [PF04859.14, score=19.8]; Syntaxin [PF00804.27, score=18.4]} {Human: ENSG00000100815, TRIP11, thyroid hormone receptor interactor 11, [RH, Score=104, Expect=7e-22]} {Mouse: ENSMUSG00000021188, Trip11, thyroid hormone receptor interactor 11, [RH, Score=107, Expect=6e-23]} {Dmel: FBgn0027287, Gmap, Golgi microtubule-associated protein, [Score=52.0, Expect=4e-06]} {Smed: dd_Smed_v6_3407_0_4, dd_Smed_v6_3407_0_4, [Score=87.4, Expect=4e-17]} {RNA1509_8227} {RNA1310_188.1, RNA1509_8227} {RNA1509_8227, RNA815_4799.1}

MligTC455_37141

1927

40.15

Mlig455_024772, Mlig455_058327

Neo: -

Age: -

PRKAA2

0.957

Mlig455_024772 {REF} {Length: 2305} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=208.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=118.8]; Adenylate sensor of SNF1-like protein kinase [PF16579.7, score=32.9]; Kinase-like [PF14531.8, score=28.7]; ABC1 atypical kinase-like domain [PF03109.18, score=22.5]} {Human: ENSG00000162409, PRKAA2, protein kinase AMP-activated catalytic subunit alpha 2, [Score=532, Expect=0.0]} {Mouse: ENSMUSG00000028518, Prkaa2, protein kinase, AMP-activated, alpha 2 catalytic subunit, [Score=522, Expect=0.0]; ENSMUSG00000050697, Prkaa1, protein kinase, AMP-activated, alpha 1 catalytic subunit, [Score=497, Expect=3e-173]} {Dmel: FBgn0023169, AMPKalpha, AMP-activated protein kinase alpha subunit, [Score=503, Expect=3e-175]} {Celegans: WBGene00020142, aak-2, 5'-AMP-activated protein kinase catalytic subunit alpha-2, [Score=476, Expect=5e-165]} {Smed: dd_Smed_v6_2538_0_1, dd_Smed_v6_2538_0_1, [Score=534, Expect=0.0]} {RNA1509_3781} {RNA1310_5604.1, RNA1509_3781} {RNA1509_3781, RNA815_2493.1}

Mlig455_058327 {REF} {Length: 2308} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=208.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=118.8]; Adenylate sensor of SNF1-like protein kinase [PF16579.7, score=32.9]; Kinase-like [PF14531.8, score=28.7]; ABC1 atypical kinase-like domain [PF03109.18, score=22.5]} {Human: ENSG00000162409, PRKAA2, protein kinase AMP-activated catalytic subunit alpha 2, [Score=532, Expect=0.0]} {Mouse: ENSMUSG00000028518, Prkaa2, protein kinase, AMP-activated, alpha 2 catalytic subunit, [Score=522, Expect=0.0]; ENSMUSG00000050697, Prkaa1, protein kinase, AMP-activated, alpha 1 catalytic subunit, [Score=497, Expect=3e-173]} {Dmel: FBgn0023169, AMPKalpha, AMP-activated protein kinase alpha subunit, [Score=503, Expect=3e-175]} {Celegans: WBGene00020142, aak-2, 5'-AMP-activated protein kinase catalytic subunit alpha-2, [Score=476, Expect=5e-165]} {Smed: dd_Smed_v6_2538_0_1, dd_Smed_v6_2538_0_1, [Score=534, Expect=0.0]} {RNA1509_3781} {RNA1310_5604.1} {RNA815_2493.1}