TomoSeq data search

Data search

Results for MligTC455_19947

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_19947	29	0.60	Mlig455_004744	Neo: - Age: Up-Down-Up	SLC30A7	Mlig455_004744 {REF} {Length: 3396} {TRANSSPLICED} {Pfam: Cation efflux family [PF01545.23, score=165.9]; Rpp14/Pop5 family [PF01900.21, score=70.2]; Spinocerebellar ataxia type 10 protein domain [PF09759.11, score=67.8]} {Human: ENSG00000162695, SLC30A7, solute carrier family 30 member 7, [Score=430, Expect=1e-142]} {Mouse: ENSMUSG00000054414, Slc30a7, solute carrier family 30 (zinc transporter), member 7, [Score=415, Expect=7e-137]} {Dmel: FBgn0037875, ZnT86D, Zinc transporter 86D, [RH, Score=382, Expect=1e-124]} {Celegans: WBGene00000393, cdf-1, Cation diffusion facilitator family protein 1, [Score=103, Expect=9e-23]} {Smed: dd_Smed_v6_4378_0_1, dd_Smed_v6_4378_0_1, [Score=232, Expect=9e-65]} {RNA1509_57158} {RNA1310_12102.2} {RNA815_7049}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_19947

0.60

Mlig455_004744

Neo: -

Age: Up-Down-Up

SLC30A7

Mlig455_004744 {REF} {Length: 3396} {TRANSSPLICED} {Pfam: Cation efflux family [PF01545.23, score=165.9]; Rpp14/Pop5 family [PF01900.21, score=70.2]; Spinocerebellar ataxia type 10 protein domain [PF09759.11, score=67.8]} {Human: ENSG00000162695, SLC30A7, solute carrier family 30 member 7, [Score=430, Expect=1e-142]} {Mouse: ENSMUSG00000054414, Slc30a7, solute carrier family 30 (zinc transporter), member 7, [Score=415, Expect=7e-137]} {Dmel: FBgn0037875, ZnT86D, Zinc transporter 86D, [RH, Score=382, Expect=1e-124]} {Celegans: WBGene00000393, cdf-1, Cation diffusion facilitator family protein 1, [Score=103, Expect=9e-23]} {Smed: dd_Smed_v6_4378_0_1, dd_Smed_v6_4378_0_1, [Score=232, Expect=9e-65]} {RNA1509_57158} {RNA1310_12102.2} {RNA815_7049}

Cumulative graph for MligTC455_19947

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-5.617	1.024	0.22491	0.86874
RegionR2	3.199	1.024	0.05986	0.29484
RegionR3	0.941	1.024	0.47601	0.98024
RegionR4	-1.795	1.024	0.99955	1.00000
RegionR5	-0.218	1.024	0.97192	1.00000
RegionR6	-0.876	1.024	0.99238	1.00000
RegionR7	2.666	1.024	0.12273	0.66084
RegionR8	1.699	1.024	0.51909	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	9.265	1.024	0.09470	0.80473
RegenerationR2	1.377	1.024	0.22713	0.67482
RegenerationR3	2.093	1.024	0.07368	0.45366
RegenerationR4	1.765	1.024	0.14686	0.57313
RegenerationR5	1.068	1.024	0.23054	0.66451
RegenerationR6	2.703	1.024	0.13063	0.44383
RegenerationBL	0.764	1.024	0.70778	1.00000
RegenerationTP	-1.871	1.024	0.50814	0.90552

Genes with expression patterns similar to MligTC455_19947

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_19947	29	0.6	Mlig455_004744	Neo: - Age: Up-Down-Up	SLC30A7	3	1.000	1.000	-	-	1.000	-	Mlig455_004744 {REF} {Length: 3396} {TRANSSPLICED} {Pfam: Cation efflux family [PF01545.23, score=165.9]; Rpp14/Pop5 family [PF01900.21, score=70.2]; Spinocerebellar ataxia type 10 protein domain [PF09759.11, score=67.8]} {Human: ENSG00000162695, SLC30A7, solute carrier family 30 member 7, [Score=430, Expect=1e-142]} {Mouse: ENSMUSG00000054414, Slc30a7, solute carrier family 30 (zinc transporter), member 7, [Score=415, Expect=7e-137]} {Dmel: FBgn0037875, ZnT86D, Zinc transporter 86D, [RH, Score=382, Expect=1e-124]} {Celegans: WBGene00000393, cdf-1, Cation diffusion facilitator family protein 1, [Score=103, Expect=9e-23]} {Smed: dd_Smed_v6_4378_0_1, dd_Smed_v6_4378_0_1, [Score=232, Expect=9e-65]} {RNA1509_57158} {RNA1310_12102.2} {RNA815_7049}
2.	MligTC455_27004	325	6.76	Mlig455_030132	Neo: - Age: -	MGAT1	0.961	-	-	-	-	0.961	-	Mlig455_030132 {REF} {Length: 3167} {Pfam: GNT-I family [PF03071.17, score=239.3]} {Human: ENSG00000131446, MGAT1, mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, [Score=149, Expect=3e-38]} {Mouse: ENSMUSG00000020346, Mgat1, mannoside acetylglucosaminyltransferase 1, [Score=170, Expect=6e-46]} {Dmel: FBgn0034521, Mgat1, Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase 1, [Score=164, Expect=7e-44]} {Celegans: WBGene00001638, gly-13, Putative alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, [Score=171, Expect=2e-46]} {Smed: dd_Smed_v6_13024_0_1, dd_Smed_v6_13024_0_1, [Score=157, Expect=7e-42]} {RNA1509_17370} {RNA1310_6218.1} {RNA815_2982}
3.	MligTC455_05024	1378	28.71	Mlig455_052094, Mlig455_057240	Neo: - Age: -	STIM1	0.951	-	-	-	-	0.951	-	Mlig455_052094 {REF} {Length: 2805} {TRANSSPLICED} {Pfam: STIM1 Orai1-activating region [PF16533.7, score=68.8]; SAM domain (Sterile alpha motif) [PF07647.19, score=19.7]} {Human: ENSG00000167323, STIM1, stromal interaction molecule 1, [RH, Score=212, Expect=6e-58]} {Mouse: ENSMUSG00000030987, Stim1, stromal interaction molecule 1, [RH, Score=213, Expect=1e-58]} {Dmel: FBgn0045073, Stim, Stromal interaction molecule, [RH, Score=171, Expect=3e-45]} {Smed: dd_Smed_v6_7756_0_1, dd_Smed_v6_7756_0_1, [Score=187, Expect=3e-50]} {RNA1509_28451} {RNA1310_6332} {RNA815_2322.1} Mlig455_057240 {REF} {Length: 3276} {TRANSSPLICED} {Pfam: STIM1 Orai1-activating region [PF16533.7, score=70.1]} {Human: ENSG00000167323, STIM1, stromal interaction molecule 1, [RH, Score=142, Expect=4e-35]} {Mouse: ENSMUSG00000030987, Stim1, stromal interaction molecule 1, [Score=148, Expect=1e-36]} {Dmel: FBgn0045073, Stim, Stromal interaction molecule, [Score=110, Expect=7e-25]} {Smed: dd_Smed_v6_7756_0_1, dd_Smed_v6_7756_0_1, [Score=129, Expect=1e-30]} {RNA1509_34755} {RNA1310_6143.1, RNA1509_34755} {RNA1509_34755, RNA815_2322.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_19947

0.6

Mlig455_004744

Neo: -

Age: Up-Down-Up

SLC30A7

1.000

MligTC455_27004

325

6.76

Mlig455_030132

Neo: -

Age: -

MGAT1

0.961

Mlig455_030132 {REF} {Length: 3167} {Pfam: GNT-I family [PF03071.17, score=239.3]} {Human: ENSG00000131446, MGAT1, mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, [Score=149, Expect=3e-38]} {Mouse: ENSMUSG00000020346, Mgat1, mannoside acetylglucosaminyltransferase 1, [Score=170, Expect=6e-46]} {Dmel: FBgn0034521, Mgat1, Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase 1, [Score=164, Expect=7e-44]} {Celegans: WBGene00001638, gly-13, Putative alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, [Score=171, Expect=2e-46]} {Smed: dd_Smed_v6_13024_0_1, dd_Smed_v6_13024_0_1, [Score=157, Expect=7e-42]} {RNA1509_17370} {RNA1310_6218.1} {RNA815_2982}

MligTC455_05024

1378

28.71

Mlig455_052094, Mlig455_057240

Neo: -

Age: -

STIM1

0.951

Mlig455_052094 {REF} {Length: 2805} {TRANSSPLICED} {Pfam: STIM1 Orai1-activating region [PF16533.7, score=68.8]; SAM domain (Sterile alpha motif) [PF07647.19, score=19.7]} {Human: ENSG00000167323, STIM1, stromal interaction molecule 1, [RH, Score=212, Expect=6e-58]} {Mouse: ENSMUSG00000030987, Stim1, stromal interaction molecule 1, [RH, Score=213, Expect=1e-58]} {Dmel: FBgn0045073, Stim, Stromal interaction molecule, [RH, Score=171, Expect=3e-45]} {Smed: dd_Smed_v6_7756_0_1, dd_Smed_v6_7756_0_1, [Score=187, Expect=3e-50]} {RNA1509_28451} {RNA1310_6332} {RNA815_2322.1}

Mlig455_057240 {REF} {Length: 3276} {TRANSSPLICED} {Pfam: STIM1 Orai1-activating region [PF16533.7, score=70.1]} {Human: ENSG00000167323, STIM1, stromal interaction molecule 1, [RH, Score=142, Expect=4e-35]} {Mouse: ENSMUSG00000030987, Stim1, stromal interaction molecule 1, [Score=148, Expect=1e-36]} {Dmel: FBgn0045073, Stim, Stromal interaction molecule, [Score=110, Expect=7e-25]} {Smed: dd_Smed_v6_7756_0_1, dd_Smed_v6_7756_0_1, [Score=129, Expect=1e-30]} {RNA1509_34755} {RNA1310_6143.1, RNA1509_34755} {RNA1509_34755, RNA815_2322.1}