Data search


search
Exact
Search

Results for MligTC455_19950

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_19950 590 12.30 Mlig455_004758, Mlig455_004843

Neo: -

Age: logFC(26M/2M)=0.490

Mlig455_004758 {REF} {Length: 1790} {RNA1509_57158} {RNA1310_25650} {RNA815_24939.1}

Mlig455_004843 {REF} {Length: 2309} {RNA1509_39529} {RNA1310_25650, RNA1509_39529} {RNA1509_39529, RNA815_24939.1}

Cumulative graph for MligTC455_19950

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.598 3.867 0.14489 0.75742
RegionR2 0.393 3.867 0.43623 0.82590
RegionR3 0.383 3.867 0.31919 0.85753
RegionR4 -0.105 3.867 0.80586 1.00000
RegionR5 0.16 3.867 0.64575 0.99783
RegionR6 -0.469 3.867 0.27147 0.86116
RegionR7 0.377 3.867 0.43288 1.00000
RegionR8 0.859 3.867 0.11315 0.62257

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.507 3.867 0.81603 1.00000
RegenerationR2 -0.006 3.867 0.98595 1.00000
RegenerationR3 0.545 3.867 0.22573 0.66103
RegenerationR4 0.25 3.867 0.57683 0.90438
RegenerationR5 0.128 3.867 0.75297 0.97254
RegenerationR6 0.039 3.867 0.94273 1.00000
RegenerationBL -0.147 3.867 0.79604 1.00000
RegenerationTP -0.304 3.867 0.59298 0.95637


Genes with expression patterns similar to MligTC455_19950

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_19950 590 12.3 Mlig455_004758, Mlig455_004843

Neo: -

Age: logFC(26M/2M)=0.490

6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_004758 {REF} {Length: 1790} {RNA1509_57158} {RNA1310_25650} {RNA815_24939.1}

Mlig455_004843 {REF} {Length: 2309} {RNA1509_39529} {RNA1310_25650, RNA1509_39529} {RNA1509_39529, RNA815_24939.1}
2. MligTC455_42381 404 8.41 Mlig455_003789, Mlig455_054335

Neo: -

Age: logFC(26M/2M)=0.707

1.761 0.800 - - 0.961 - -

Mlig455_003789 {REF} {Length: 1565} {Pfam: Domain of unknown function (DUF4743) [PF15916.7, score=74.0]; NUDIX domain [PF00293.30, score=43.7]} {Dmel: FBgn0039958, CG12567, [RH, Score=178, Expect=3e-53]} {Smed: dd_Smed_v6_11761_0_1, dd_Smed_v6_11761_0_1, [RH, Score=233, Expect=3e-75]} {RNA1509_22954} {RNA1310_24085, RNA1509_22954} {RNA1509_22954, RNA815_9482}

Mlig455_054335 {REF} {Length: 1582} {Pfam: NUDIX domain [PF00293.30, score=44.8]; Domain of unknown function (DUF4743) [PF15916.7, score=37.1]} {Dmel: FBgn0039958, CG12567, [Score=155, Expect=7e-46]} {Smed: dd_Smed_v6_11761_0_1, dd_Smed_v6_11761_0_1, [Score=200, Expect=1e-63]} {RNA1509_22954} {RNA1310_24085} {RNA815_9482}
3. MligTC455_40943 1372 28.59 Mlig455_016189

Neo: -

Age: -

CHAC1 1.711 - - - 0.968 - 0.743 Mlig455_016189 {REF} {Length: 2028} {Pfam: ChaC-like protein [PF04752.14, score=169.2]} {Human: ENSG00000128965, CHAC1, ChaC glutathione specific gamma-glutamylcyclotransferase 1, [Score=137, Expect=3e-39]} {Mouse: ENSMUSG00000027313, Chac1, ChaC, cation transport regulator 1, [RH, Score=143, Expect=1e-41]} {Dmel: FBgn0039109, CG10365, [RH, Score=135, Expect=7e-38]} {Celegans: WBGene00017724, F22F7.7, Gamma-glutamylcyclotransferase, [Score=106, Expect=1e-27]} {Smed: dd_Smed_v6_2439_0_1, dd_Smed_v6_2439_0_1, [RH, Score=191, Expect=2e-60]} {RNA1509_16910, RNA1509_28275} {RNA1310_15384, RNA1509_16910, RNA1509_28275} {RNA1509_16910, RNA1509_28275, RNA815_5907}
4. MligTC455_03726 398 8.29 Mlig455_067123

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.557

Region-enriched R3: 3.154/0.00000

0.964 - - - 0.964 - - Mlig455_067123 {REF} {Length: 2830} {Pfam: Group 7 allergen [PF16984.7, score=97.0]} {RNA1509_43789, RNA1509_5662} {RNA1310_3902, RNA1509_43789} {RNA1509_43789, RNA815_13325}
5. MligTC455_10785 347 7.24 Mlig455_030825

Neo: -

Age: -

0.963 - - - 0.963 - - Mlig455_030825 {REF} {Length: 570} {Pfam: Essential protein Yae1, N terminal [PF09811.11, score=77.3]}
6. MligTC455_18020 367 7.65 Mlig455_069164

Neo: -

Age: -

TMEM68 0.959 - - - - - 0.959 Mlig455_069164 {REF} {Length: 1616} {TRANSSPLICED} {Human: ENSG00000167904, TMEM68, transmembrane protein 68, [Score=122, Expect=3e-32]} {Mouse: ENSMUSG00000028232, Tmem68, transmembrane protein 68, [Score=116, Expect=2e-30]} {Dmel: FBgn0085377, CG34348, [Score=124, Expect=2e-33]} {Celegans: WBGene00021394, Y38C1AA.1, [Score=105, Expect=3e-26]} {Smed: dd_Smed_v6_13739_0_1, dd_Smed_v6_13739_0_1, [Score=98.2, Expect=4e-25]} {RNA1509_15918} {RNA1310_13548} {RNA815_46805}
7. MligTC455_18019 373 7.77 Mlig455_045245

Neo: -

Age: -

TMEM68 0.958 - - - - - 0.958 Mlig455_045245 {REF} {Length: 1902} {TRANSSPLICED} {Pfam: Acyltransferase [PF01553.23, score=39.9]; Diacylglycerol acyltransferase [PF03982.15, score=30.4]} {Human: ENSG00000167904, TMEM68, transmembrane protein 68, [RH, Score=247, Expect=2e-79]} {Mouse: ENSMUSG00000028232, Tmem68, transmembrane protein 68, [RH, Score=238, Expect=3e-76]} {Dmel: FBgn0085377, CG34348, [RH, Score=226, Expect=1e-71]} {Celegans: WBGene00021394, Y38C1AA.1, [RH, Score=222, Expect=2e-69]} {Smed: dd_Smed_v6_13739_0_1, dd_Smed_v6_13739_0_1, [RH, Score=146, Expect=6e-43]} {RNA1509_15918} {RNA1310_13548, RNA1509_15918} {RNA1509_15918, RNA815_36240}
8. MligTC455_33905 1547 32.23 Mlig455_036181

Neo: -

Age: logFC(26M/2M)=0.200

YKT6 0.953 - - - - - 0.953 Mlig455_036181 {REF} {Length: 1926} {TRANSSPLICED} {Pfam: Synaptobrevin [PF00957.23, score=54.6]; Regulated-SNARE-like domain [PF13774.8, score=45.8]} {Human: ENSG00000106636, YKT6, YKT6 v-SNARE homolog, [RH, Score=216, Expect=1e-71]} {Mouse: ENSMUSG00000002741, Ykt6, YKT6 v-SNARE homolog (S. cerevisiae), [RH, Score=215, Expect=4e-71]} {Dmel: FBgn0260858, Ykt6, YKT6 v-SNARE, [RH, Score=208, Expect=1e-68]} {Celegans: WBGene00015164, ykt-6, YKT6 (Yeast v-SNARE) homolog, [RH, Score=191, Expect=5e-62]} {Smed: dd_Smed_v6_8028_0_1, dd_Smed_v6_8028_0_1, [RH, Score=244, Expect=6e-83]} {RNA1509_30253, RNA1509_50545, RNA1509_6762} {RNA1310_14659, RNA1509_30253, RNA1509_50545, RNA1509_6762} {RNA1509_30253, RNA1509_50545, RNA1509_6762, RNA815_4604.1}
9. MligTC455_43580 416 8.66 Mlig455_058560

Neo: -

Age: -

Region-enriched R4: 3.115/0.00016

UBXN6 0.953 - - - - - 0.953 Mlig455_058560 {REF} {Length: 2769} {TRANSSPLICED} {Pfam: PUB domain [PF09409.12, score=78.3]; UBX domain [PF00789.22, score=31.0]} {Human: ENSG00000167671, UBXN6, UBX domain protein 6, [RH, Score=190, Expect=4e-55]} {Mouse: ENSMUSG00000019578, Ubxn6, UBX domain protein 6, [RH, Score=191, Expect=1e-55]} {Dmel: FBgn0034372, Gint3, GDI interacting protein 3, [RH, Score=201, Expect=2e-59]} {Celegans: WBGene00019163, ubxn-6, UBX-containing protein in Nematodes, [RH, Score=144, Expect=3e-38]} {Smed: dd_Smed_v6_4652_0_1, dd_Smed_v6_4652_0_1, [RH, Score=160, Expect=2e-44]} {RNA1509_28751, RNA1509_34942, RNA1509_57494, RNA1509_59796} {RNA1310_19219, RNA1509_28751, RNA1509_34942, RNA1509_57494, RNA1509_59796} {RNA1509_28751, RNA1509_34942, RNA1509_57494, RNA1509_59796, RNA815_18642.1}
10. MligTC455_53749 267 5.57 Mlig455_025332

Neo: -

Age: Down-Down-Up

Region-enriched R3: 8.984/0.00000

0.953 - - - 0.953 - - Mlig455_025332 {REF} {Length: 1716} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=38.6]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=19.0]} {RNA1509_20092} {RNA1310_25074} {RNA815_35763}
11. MligTC455_12599 431 8.97 Mlig455_051370

Neo: -

Age: -

0.952 - - - 0.952 - - Mlig455_051370 {REF} {Length: 1394} {TRANSSPLICED} {Pfam: Ecdysteroid kinase-like family [PF02958.22, score=101.8]; Protein of unknown function (DUF1679) [PF07914.13, score=57.9]; Phosphotransferase enzyme family [PF01636.25, score=30.0]} {Dmel: FBgn0031801, CG9498, [RH, Score=51.2, Expect=5e-07]} {Celegans: WBGene00010238, F58B4.5, [Score=46.6, Expect=1e-05]} {RNA1509_52182} {RNA1310_18242} {RNA815_8302.1}
12. MligTC455_53539 175 3.65 Mlig455_065659

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.225

Region-enriched R4: 2.843/0.01754

CSNK1A1 0.952 - - - - - 0.952 Mlig455_065659 {REF} {Length: 2765} {Pfam: Protein kinase domain [PF00069.27, score=99.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=61.8]; Fungal protein kinase [PF17667.3, score=34.0]} {Human: ENSG00000113712, CSNK1A1, casein kinase 1 alpha 1, [RH, Score=585, Expect=0.0]} {Mouse: ENSMUSG00000024576, Csnk1a1, casein kinase 1, alpha 1, [RH, Score=586, Expect=0.0]} {Dmel: FBgn0015024, CkIalpha, Casein kinase Ialpha, [RH, Score=506, Expect=0.0]} {Celegans: WBGene00002202, kin-19, Casein kinase I isoform alpha, [RH, Score=557, Expect=0.0]} {Smed: dd_Smed_v6_1989_0_1, dd_Smed_v6_1989_0_1, [RH, Score=573, Expect=0.0]} {RNA1509_10531, RNA1509_2037} {RNA1310_8479.1, RNA1509_10531, RNA1509_2037} {RNA1509_10531, RNA1509_2037, RNA815_6396}
13. MligTC455_12063 57 1.18 Mlig455_008406

Neo: -

Age: -

0.951 - - - 0.951 - - Mlig455_008406 {REF} {Length: 720} {NoTransDecoderORF} {RNA1509_35335} {RNA1310_11566}
14. MligTC455_49171 415 8.65 Mlig455_006880

Neo: -

Age: Down-Up-Down

LRRFIP2 0.951 - - - 0.951 - - Mlig455_006880 {REF} {Length: 4024} {TRANSSPLICED} {Pfam: LRRFIP family [PF09738.11, score=108.0]} {Human: ENSG00000093167, LRRFIP2, LRR binding FLII interacting protein 2, [Score=112, Expect=5e-27]} {Mouse: ENSMUSG00000032497, Lrrfip2, leucine rich repeat (in FLII) interacting protein 2, [Score=112, Expect=3e-27]} {Dmel: FBgn0030699, CG8578, [Score=78.6, Expect=1e-15]} {Celegans: WBGene00018998, flap-1, FLi1-Associated Protein homolog, [Score=74.7, Expect=1e-14]} {Smed: dd_Smed_v6_5214_0_1, dd_Smed_v6_5214_0_1, [RH, Score=127, Expect=5e-33]} {RNA1509_10267, RNA1509_37919} {RNA1310_14942, RNA1509_10267, RNA1509_37919} {RNA1509_10267, RNA1509_37919, RNA815_6800.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA