Data search
Results for MligTC455_19973
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_19973 | 48 | 1.00 | Mlig455_069241 | Neo: - Age: Down-Down-Down Region-enriched R6: 5.160/0.00065 |
KCTD1 | Mlig455_069241 {REF} {Length: 2222} {Pfam: Phage integrase family [PF00589.24, score=36.4]; Domain of unknown function (DUF3504) [PF12012.10, score=33.9]} {Human: ENSG00000134504, KCTD1, potassium channel tetramerization domain containing 1, [Score=101, Expect=5e-22]} {Mouse: ENSMUSG00000036225, Kctd1, potassium channel tetramerisation domain containing 1, [Score=100, Expect=5e-22]} {RNA1509_59374} {RNA1310_69580} {RNA815_28896} |
Cumulative graph for MligTC455_19973
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.381 | 1.282 | 0.99991 | 1.00000 | |
| RegionR2 | -2.23 | 1.282 | 1.00000 | 1.00000 | |
| RegionR3 | 0.113 | 1.282 | 0.62461 | 1.00000 | |
| RegionR4 | 2.234 | 1.282 | 0.06448 | 0.22873 | |
| RegionR5 | 3.486 | 1.282 | 0.00272 | 0.02196 | |
| RegionR6 | 5.16 | 1.282 | 0.00000 | 0.00065 | |
| RegionR7 | 1.92 | 1.282 | 0.16546 | 0.75014 | |
| RegionR8 | -4.301 | 1.282 | 1.00000 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.976 | 1.282 | 0.99995 | 1.00000 | |
| RegenerationR2 | 1.734 | 1.282 | 0.25100 | 0.69756 | |
| RegenerationR3 | 0.505 | 1.282 | 0.84433 | 0.99612 | |
| RegenerationR4 | 0.756 | 1.282 | 0.59917 | 0.91297 | |
| RegenerationR5 | -2.029 | 1.282 | 0.07912 | 0.43802 | |
| RegenerationR6 | -3.065 | 1.282 | 0.01084 | 0.12864 | |
| RegenerationBL | -0.223 | 1.282 | 0.88165 | 1.00000 | |
| RegenerationTP | 1.482 | 1.282 | 0.58487 | 0.95247 |
Genes with expression patterns similar to MligTC455_19973
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_19973 | 48 | 1 | Mlig455_069241 | Neo: - Age: Down-Down-Down Region-enriched R6: 5.160/0.00065 |
KCTD1 | 4 | 1.000 | 1.000 | 1.000 | - | - | 1.000 | Mlig455_069241 {REF} {Length: 2222} {Pfam: Phage integrase family [PF00589.24, score=36.4]; Domain of unknown function (DUF3504) [PF12012.10, score=33.9]} {Human: ENSG00000134504, KCTD1, potassium channel tetramerization domain containing 1, [Score=101, Expect=5e-22]} {Mouse: ENSMUSG00000036225, Kctd1, potassium channel tetramerisation domain containing 1, [Score=100, Expect=5e-22]} {RNA1509_59374} {RNA1310_69580} {RNA815_28896} |
| 2. | MligTC455_20717 | 964 | 20.08 | Mlig455_010303, Mlig455_010334 | Neo: - Age: - Region-enriched R6: 8.114/0.00000 Regeneration-upregulated TP: 8.019 Regeneration-enriched TP: 8.019 |
1.765 | - | 0.952 | 0.813 | - | - | - | Mlig455_010303 {REF} {Length: 1139} {TRANSSPLICED} {Mouse: ENSMUSG00000044581, 4932415D10Rik, RIKEN cDNA 4932415D10 gene, [Score=45.8, Expect=7e-06]} {RNA1509_30258} {RNA1310_41086.1} {RNA815_30011} Mlig455_010334 {REF} {Length: 2409} {Mouse: ENSMUSG00000044581, 4932415D10Rik, RIKEN cDNA 4932415D10 gene, [Score=45.8, Expect=7e-06]} {RNA1509_54865} {RNA1310_41086.1} {RNA815_30011} |
|
| 3. | MligTC455_38757 | 498 | 10.37 | Mlig455_062546 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 5.796 Region-enriched R4: 2.609/0.00032 Regeneration-downregulated R4: -2.641 Regeneration-depleted R4: -2.641 |
ABCA5 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_062546 {REF} {Length: 4504} {Pfam: ABC transporter [PF00005.29, score=107.7]; ABC-2 family transporter protein [PF12698.9, score=24.4]; P-loop containing region of AAA domain [PF13555.8, score=22.4]; RsgA GTPase [PF03193.18, score=22.0]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=21.8]; AAA domain [PF13401.8, score=20.4]} {Human: ENSG00000154265, ABCA5, ATP binding cassette subfamily A member 5, [Score=119, Expect=4e-26]; ENSG00000154263, ABCA10, ATP binding cassette subfamily A member 10, [Score=117, Expect=1e-25]} {Mouse: ENSMUSG00000018800, Abca5, ATP-binding cassette, sub-family A (ABC1), member 5, [Score=105, Expect=3e-22]} {Dmel: FBgn0261998, CG42816, [Score=77.8, Expect=6e-14]} {Celegans: WBGene00000022, abt-4, ABC Transporter family, [Score=103, Expect=6e-22]} {Smed: dd_Smed_v6_10304_0_1, dd_Smed_v6_10304_0_1, [Score=68.9, Expect=2e-11]} {RNA1509_10310} {RNA1310_863.1} {RNA815_265.1} |
| 4. | MligTC455_23457 | 314 | 6.54 | Mlig455_029520 | Neo: - Age: Up-Down-Up Region-enriched R7: 5.927/0.00000 Regeneration-upregulated BL: 4.346 Regeneration-enriched BL: 4.346 |
FZD10 | 0.956 | - | 0.956 | - | - | - | - | Mlig455_029520 {REF} {Length: 3781} {TRANSSPLICED} {Pfam: Frizzled/Smoothened family membrane region [PF01534.19, score=272.7]; Fz domain [PF01392.24, score=63.7]} {Human: ENSG00000111432, FZD10, frizzled class receptor 10, [Score=275, Expect=7e-83]} {Mouse: ENSMUSG00000081683, Fzd10, frizzled class receptor 10, [Score=273, Expect=4e-82]; ENSMUSG00000049791, Fzd4, frizzled class receptor 4, [Score=267, Expect=2e-80]; ENSMUSG00000049551, Fzd9, frizzled class receptor 9, [Score=264, Expect=7e-79]} {Dmel: FBgn0016797, fz2, frizzled 2, [Score=198, Expect=4e-54]} {Celegans: WBGene00000478, cfz-2, Frizzled-2, [Score=210, Expect=3e-59]} {Smed: dd_Smed_v6_11650_0_1, dd_Smed_v6_11650_0_1, [Score=259, Expect=1e-76]} {RNA1310_57348} {RNA815_40236} |
| 5. | MligTC455_12291 | 205 | 4.28 | Mlig455_016878 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 5.701 Region-enriched R4: 2.586/0.03421 |
CSNK1D | 0.955 | - | - | - | - | - | 0.955 | Mlig455_016878 {REF} {Length: 3388} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=51.7]; Fungal protein kinase [PF17667.3, score=24.0]} {Human: ENSG00000141551, CSNK1D, casein kinase 1 delta, [Score=95.9, Expect=2e-20]; ENSG00000283900, TPTEP2-CSNK1E, TPTEP2-CSNK1E readthrough, [Score=95.1, Expect=3e-20]; ENSG00000213923, CSNK1E, casein kinase 1 epsilon, [Score=95.1, Expect=3e-20]; ENSG00000113712, CSNK1A1, casein kinase 1 alpha 1, [Score=95.1, Expect=1e-20]; ENSG00000180138, CSNK1A1L, casein kinase 1 alpha 1 like, [Score=93.6, Expect=4e-20]} {Mouse: ENSMUSG00000022433, Csnk1e, casein kinase 1, epsilon, [Score=95.5, Expect=2e-20]; ENSMUSG00000025162, Csnk1d, casein kinase 1, delta, [Score=95.5, Expect=2e-20]; ENSMUSG00000024576, Csnk1a1, casein kinase 1, alpha 1, [Score=95.1, Expect=8e-21]} {Dmel: FBgn0032650, CG7094, [Score=92.0, Expect=1e-19]} {Celegans: WBGene00002203, kin-20, Casein kinase I isoform delta, [Score=92.0, Expect=2e-20]} {Smed: dd_Smed_v6_4561_0_1, dd_Smed_v6_4561_0_1, [Score=102, Expect=7e-23]} {RNA1509_57548, RNA1509_7887} {RNA1310_10396, RNA1509_57548, RNA1509_7887} {RNA1509_57548, RNA1509_7887, RNA815_3389} |
| 6. | MligTC455_09484 | 32 | 0.67 | Mlig455_007982 | Neo: - Age: Up-Down-Down |
0.951 | - | 0.951 | - | - | - | - | Mlig455_007982 {REF} {Length: 2332} {Pfam: Mab-21 protein [PF03281.16, score=30.7]} {RNA1509_45347} {RNA1310_12573.1} {RNA815_23121} | |
| 7. | MligTC455_11398 | 150 | 3.13 | Mlig455_037391 | Neo: Germline Age: - Region-specific R4: 5.846 Region-enriched R4: 3.235/0.00197 |
IDH3G | 0.951 | - | - | - | - | - | 0.951 | Mlig455_037391 {REF} {Length: 2085} {TRANSSPLICED} {Pfam: Isocitrate/isopropylmalate dehydrogenase [PF00180.22, score=212.4]} {Human: ENSG00000067829, IDH3G, isocitrate dehydrogenase 3 (NAD(+)) gamma, [Score=345, Expect=1e-115]} {Mouse: ENSMUSG00000002010, Idh3g, isocitrate dehydrogenase 3 (NAD+), gamma, [Score=345, Expect=6e-116]} {Dmel: FBgn0039358, CG5028, [Score=326, Expect=1e-108]} {Celegans: WBGene00009440, idhg-1, Isocitrate dehydrogenase [NAD] subunit, mitochondrial, [Score=337, Expect=3e-113]} {Smed: dd_Smed_v6_3320_0_1, dd_Smed_v6_3320_0_1, [Score=350, Expect=2e-118]} {RNA1509_21290, RNA1509_52324, RNA1509_58071} {RNA1310_17287, RNA1509_21290, RNA1509_52324, RNA1509_58071} {RNA1509_21290, RNA1509_52324, RNA1509_58071, RNA815_7816} |
| 8. | MligTC455_06295 | 178 | 3.7 | Mlig455_007554, Mlig455_011810, Mlig455_013188 | Neo: - Age: logFC(26M/2M)=-0.489 |
RDH12 | 0.95 | - | - | 0.950 | - | - | - | Mlig455_007554 {REF} {Length: 2179} {Pfam: short chain dehydrogenase [PF00106.27, score=73.8]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=39.9]} {Human: ENSG00000139988, RDH12, retinol dehydrogenase 12, [Score=134, Expect=2e-36]; ENSG00000240857, RDH14, retinol dehydrogenase 14, [Score=134, Expect=4e-36]} {Mouse: ENSMUSG00000020621, Rdh14, retinol dehydrogenase 14 (all-trans and 9-cis), [Score=138, Expect=9e-38]} {Dmel: FBgn0033205, CG2064, [Score=129, Expect=2e-34]} {Celegans: WBGene00000965, dhs-1, DeHydrogenases, Short chain, [RH, Score=101, Expect=2e-24]} {Smed: dd_Smed_v6_11283_0_1, dd_Smed_v6_11283_0_1, [Score=121, Expect=1e-31]} {RNA1310_44802} {RNA815_47495} Mlig455_011810 {REF} {Length: 2033} {Pfam: short chain dehydrogenase [PF00106.27, score=73.4]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=41.5]} {Human: ENSG00000139988, RDH12, retinol dehydrogenase 12, [Score=141, Expect=1e-38]} {Mouse: ENSMUSG00000020621, Rdh14, retinol dehydrogenase 14 (all-trans and 9-cis), [Score=137, Expect=3e-37]; ENSMUSG00000021123, Rdh12, retinol dehydrogenase 12, [Score=133, Expect=1e-35]} {Dmel: FBgn0029866, CG3842, [Score=134, Expect=2e-35]} {Celegans: WBGene00000965, dhs-1, DeHydrogenases, Short chain, [RH, Score=99.8, Expect=1e-23]} {Smed: dd_Smed_v6_11283_0_1, dd_Smed_v6_11283_0_1, [Score=117, Expect=5e-30]} {RNA1310_45617} {RNA815_47495} Mlig455_013188 {REF} {Length: 2164} {Pfam: short chain dehydrogenase [PF00106.27, score=72.3]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=40.9]} {Human: ENSG00000139988, RDH12, retinol dehydrogenase 12, [Score=139, Expect=6e-38]} {Mouse: ENSMUSG00000021123, Rdh12, retinol dehydrogenase 12, [Score=137, Expect=3e-37]; ENSMUSG00000020621, Rdh14, retinol dehydrogenase 14 (all-trans and 9-cis), [Score=135, Expect=2e-36]} {Dmel: FBgn0029866, CG3842, [Score=135, Expect=9e-36]} {Celegans: WBGene00000965, dhs-1, DeHydrogenases, Short chain, [RH, Score=100, Expect=5e-24]} {Smed: dd_Smed_v6_2096_0_1, dd_Smed_v6_2096_0_1, [Score=115, Expect=2e-29]} {RNA1310_45617} {RNA815_47495} |