TomoSeq data search

Data search

Results for MligTC455_20066

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_20066	445	9.26	Mlig455_034097	Neo: - Age: Up-Down-Down	MAP2K4	Mlig455_034097 {REF} {Length: 4317} {Pfam: Protein kinase domain [PF00069.27, score=180.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=131.6]; Kinase-like [PF14531.8, score=25.9]; ABC1 atypical kinase-like domain [PF03109.18, score=17.7]} {Human: ENSG00000065559, MAP2K4, mitogen-activated protein kinase kinase 4, [Score=379, Expect=6e-129]} {Mouse: ENSMUSG00000033352, Map2k4, mitogen-activated protein kinase kinase 4, [Score=381, Expect=7e-130]} {Dmel: FBgn0024326, Mkk4, MAP kinase kinase 4, [Score=351, Expect=6e-118]} {Celegans: WBGene00004758, sek-1, Dual specificity mitogen-activated protein kinase kinase sek-1, [RH, Score=291, Expect=6e-96]} {Smed: dd_Smed_v6_3173_0_1, dd_Smed_v6_3173_0_1, [Score=338, Expect=8e-114]} {RNA1509_20072, RNA1509_43520, RNA1509_53539} {RNA1310_9555.1, RNA1509_20072, RNA1509_43520, RNA1509_53539} {RNA1509_20072, RNA1509_43520, RNA1509_53539, RNA815_6872.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_20066

445

9.26

Mlig455_034097

Neo: -

Age: Up-Down-Down

MAP2K4

Mlig455_034097 {REF} {Length: 4317} {Pfam: Protein kinase domain [PF00069.27, score=180.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=131.6]; Kinase-like [PF14531.8, score=25.9]; ABC1 atypical kinase-like domain [PF03109.18, score=17.7]} {Human: ENSG00000065559, MAP2K4, mitogen-activated protein kinase kinase 4, [Score=379, Expect=6e-129]} {Mouse: ENSMUSG00000033352, Map2k4, mitogen-activated protein kinase kinase 4, [Score=381, Expect=7e-130]} {Dmel: FBgn0024326, Mkk4, MAP kinase kinase 4, [Score=351, Expect=6e-118]} {Celegans: WBGene00004758, sek-1, Dual specificity mitogen-activated protein kinase kinase sek-1, [RH, Score=291, Expect=6e-96]} {Smed: dd_Smed_v6_3173_0_1, dd_Smed_v6_3173_0_1, [Score=338, Expect=8e-114]} {RNA1509_20072, RNA1509_43520, RNA1509_53539} {RNA1310_9555.1, RNA1509_20072, RNA1509_43520, RNA1509_53539} {RNA1509_20072, RNA1509_43520, RNA1509_53539, RNA815_6872.1}

Cumulative graph for MligTC455_20066

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.024	3.575	0.97856	1.00000
RegionR2	1.414	3.575	0.00595	0.07193
RegionR3	-0.227	3.575	0.56695	1.00000
RegionR4	-1.063	3.575	0.02823	0.13019
RegionR5	0.492	3.575	0.13099	0.36790
RegionR6	0.096	3.575	0.81004	1.00000
RegionR7	-0.52	3.575	0.37928	1.00000
RegionR8	-0.167	3.575	0.81531	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-5.877	3.575	0.20927	0.94839
RegenerationR2	0.085	3.575	0.82234	0.99563
RegenerationR3	0.818	3.575	0.08566	0.47682
RegenerationR4	0.401	3.575	0.42230	0.82647
RegenerationR5	0.399	3.575	0.30703	0.73410
RegenerationR6	0.395	3.575	0.42409	0.75411
RegenerationBL	-0.418	3.575	0.59755	0.94520
RegenerationTP	0.428	3.575	0.54886	0.93219

Genes with expression patterns similar to MligTC455_20066

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_20066	445	9.26	Mlig455_034097	Neo: - Age: Up-Down-Down	MAP2K4	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_034097 {REF} {Length: 4317} {Pfam: Protein kinase domain [PF00069.27, score=180.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=131.6]; Kinase-like [PF14531.8, score=25.9]; ABC1 atypical kinase-like domain [PF03109.18, score=17.7]} {Human: ENSG00000065559, MAP2K4, mitogen-activated protein kinase kinase 4, [Score=379, Expect=6e-129]} {Mouse: ENSMUSG00000033352, Map2k4, mitogen-activated protein kinase kinase 4, [Score=381, Expect=7e-130]} {Dmel: FBgn0024326, Mkk4, MAP kinase kinase 4, [Score=351, Expect=6e-118]} {Celegans: WBGene00004758, sek-1, Dual specificity mitogen-activated protein kinase kinase sek-1, [RH, Score=291, Expect=6e-96]} {Smed: dd_Smed_v6_3173_0_1, dd_Smed_v6_3173_0_1, [Score=338, Expect=8e-114]} {RNA1509_20072, RNA1509_43520, RNA1509_53539} {RNA1310_9555.1, RNA1509_20072, RNA1509_43520, RNA1509_53539} {RNA1509_20072, RNA1509_43520, RNA1509_53539, RNA815_6872.1}
2.	MligTC455_41817	273	5.69	Mlig455_050915	Neo: - Age: Down-Down-Up Region-enriched R2: 2.421/0.00679		1.684	-	-	-	-	0.950	0.734	Mlig455_050915 {REF} {Length: 1810} {TRANSSPLICED} {RNA1509_26844, RNA1509_35213} {RNA1310_16013.2, RNA1509_26844, RNA1509_35213} {RNA1509_26844, RNA1509_35213, RNA815_32730}
3.	MligTC455_04482	609	12.68	Mlig455_069696	Neo: - Age: -	VPS45	0.964	-	-	-	-	0.964	-	Mlig455_069696 {REF} {Length: 3353} {TRANSSPLICED} {Pfam: Sec1 family [PF00995.25, score=403.7]} {Human: ENSG00000136631, VPS45, vacuolar protein sorting 45 homolog, [RH, Score=556, Expect=0.0]} {Mouse: ENSMUSG00000015747, Vps45, vacuolar protein sorting 45, [RH, Score=562, Expect=0.0]} {Dmel: FBgn0261049, Vps45, Vacuolar protein sorting 45, [RH, Score=479, Expect=1e-163]} {Celegans: WBGene00016643, vps-45, Related to yeast Vacuolar Protein Sorting factor, [RH, Score=426, Expect=3e-143]} {Smed: dd_Smed_v6_5697_0_1, dd_Smed_v6_5697_0_1, [RH, Score=467, Expect=2e-159]} {RNA1509_21620, RNA1509_31310, RNA1509_9541} {RNA1310_14624, RNA1509_21620, RNA1509_31310, RNA1509_9541} {RNA1509_21620, RNA1509_31310, RNA1509_9541, RNA815_7222}
4.	MligTC455_32345	130	2.71	Mlig455_019607	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_019607 {REF} {Length: 499} {NoTransDecoderORF} {RNA1509_25027} {RNA1310_31838.1} {RNA815_7591.1}