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Results for MligTC455_20093

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_20093 1737 36.18 Mlig455_012979

Neo: -

Age: Down-Up-Up

 FANK1 Mlig455_012979 {REF} {Length: 2974} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=96.5]; Ankyrin repeats (3 copies) [PF12796.9, score=86.0]; Ankyrin repeats (many copies) [PF13857.8, score=85.7]; Ankyrin repeat [PF00023.32, score=80.5]; Ankyrin repeat [PF13606.8, score=60.0]; Fibronectin type III domain [PF00041.23, score=24.4]} {Human: ENSG00000203780, FANK1, fibronectin type III and ankyrin repeat domains 1, [Score=178, Expect=8e-53]} {Mouse: ENSMUSG00000053111, Fank1, fibronectin type 3 and ankyrin repeat domains 1, [Score=166, Expect=3e-48]} {Dmel: FBgn0043884, mask, multiple ankyrin repeats single KH domain, [Score=87.4, Expect=2e-18]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=80.1, Expect=4e-16]} {Smed: dd_Smed_v6_7571_0_2, dd_Smed_v6_7571_0_2, [Score=230, Expect=2e-73]} {RNA1509_12066, RNA1509_44597} {RNA1310_25910.1, RNA1509_12066, RNA1509_44597} {RNA1509_12066, RNA1509_44597, RNA815_3233}

Cumulative graph for MligTC455_20093

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.684 5.322 0.33812 0.98413
RegionR2 0.242 5.322 0.40960 0.80282
RegionR3 0.644 5.322 0.00584 0.10599
RegionR4 0.156 5.322 0.58446 0.90026
RegionR5 -0.1 5.322 0.67275 1.00000
RegionR6 -0.017 5.322 0.94935 1.00000
RegionR7 0.336 5.322 0.27387 0.90493
RegionR8 -0.578 5.322 0.18933 0.78008

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.576 5.322 0.59730 1.00000
RegenerationR2 0.084 5.322 0.72416 0.96367
RegenerationR3 -0.182 5.322 0.47922 0.84928
RegenerationR4 0.232 5.322 0.39816 0.81225
RegenerationR5 0.18 5.322 0.48239 0.84761
RegenerationR6 -0.009 5.322 0.97406 1.00000
RegenerationBL 0.099 5.322 0.75870 1.00000
RegenerationTP 0.142 5.322 0.69765 1.00000


Genes with expression patterns similar to MligTC455_20093

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_20093 1737 36.18 Mlig455_012979

Neo: -

Age: Down-Up-Up

 FANK1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_012979 {REF} {Length: 2974} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=96.5]; Ankyrin repeats (3 copies) [PF12796.9, score=86.0]; Ankyrin repeats (many copies) [PF13857.8, score=85.7]; Ankyrin repeat [PF00023.32, score=80.5]; Ankyrin repeat [PF13606.8, score=60.0]; Fibronectin type III domain [PF00041.23, score=24.4]} {Human: ENSG00000203780, FANK1, fibronectin type III and ankyrin repeat domains 1, [Score=178, Expect=8e-53]} {Mouse: ENSMUSG00000053111, Fank1, fibronectin type 3 and ankyrin repeat domains 1, [Score=166, Expect=3e-48]} {Dmel: FBgn0043884, mask, multiple ankyrin repeats single KH domain, [Score=87.4, Expect=2e-18]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=80.1, Expect=4e-16]} {Smed: dd_Smed_v6_7571_0_2, dd_Smed_v6_7571_0_2, [Score=230, Expect=2e-73]} {RNA1509_12066, RNA1509_44597} {RNA1310_25910.1, RNA1509_12066, RNA1509_44597} {RNA1509_12066, RNA1509_44597, RNA815_3233}
2. MligTC455_22603 882 18.38 Mlig455_035234, Mlig455_035278

Neo: -

Age: -

 IQCJ-SCHIP1 1.715 - - - - 0.758 0.957

Mlig455_035234 {REF} {Length: 3410} {Pfam: Schwannomin-interacting protein 1 [PF10148.11, score=135.0]} {Human: ENSG00000283154, IQCJ-SCHIP1, IQCJ-SCHIP1 readthrough, [Score=112, Expect=1e-25]; ENSG00000151967, SCHIP1, schwannomin interacting protein 1, [Score=111, Expect=1e-26]} {Mouse: ENSMUSG00000027777, Schip1, schwannomin interacting protein 1, [Score=113, Expect=4e-26]; ENSMUSG00000102422, Iqschfp, Iqcj and Schip1 fusion protein, [Score=112, Expect=2e-25]} {Celegans: WBGene00018074, F35H12.1, [Score=48.5, Expect=1e-05]} {RNA1509_12622} {RNA1310_5529, RNA1509_12622} {RNA1509_12622, RNA815_5546}

Mlig455_035278 {REF} {Length: 3557} {Pfam: Schwannomin-interacting protein 1 [PF10148.11, score=137.9]} {Human: ENSG00000283154, IQCJ-SCHIP1, IQCJ-SCHIP1 readthrough, [Score=115, Expect=2e-26]; ENSG00000151967, SCHIP1, schwannomin interacting protein 1, [Score=113, Expect=2e-27]} {Mouse: ENSMUSG00000027777, Schip1, schwannomin interacting protein 1, [Score=115, Expect=7e-27]; ENSMUSG00000102422, Iqschfp, Iqcj and Schip1 fusion protein, [Score=114, Expect=4e-26]} {Celegans: WBGene00018074, F35H12.1, [Score=48.9, Expect=1e-05]} {RNA1509_12622} {RNA1310_5529} {RNA815_5546}
3. MligTC455_21090 421 8.77 Mlig455_014954

Neo: -

Age: logFC(26M/2M)=-0.316

 TRPM1 0.953 - - - - - 0.953 Mlig455_014954 {REF} {Length: 4595} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=64.3]; Ankyrin repeats (many copies) [PF13637.8, score=58.9]; Ankyrin repeats (many copies) [PF13857.8, score=52.6]; Ion transport protein [PF00520.33, score=47.9]; Ankyrin repeat [PF13606.8, score=39.1]; Ankyrin repeat [PF00023.32, score=35.0]} {Human: ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=168, Expect=2e-41]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=168, Expect=1e-41]; ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=160, Expect=3e-39]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=163, Expect=3e-40]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=160, Expect=4e-39]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=125, Expect=1e-28]} {Celegans: WBGene00001796, gtl-2, Gon-Two Like (TRP subfamily), [Score=90.9, Expect=4e-18]} {Smed: dd_Smed_v6_8382_0_1, dd_Smed_v6_8382_0_1, [Score=188, Expect=1e-48]} {RNA1509_3562} {RNA1310_2118.1} {RNA815_362.1}
4. MligTC455_21678 1081 22.51 Mlig455_037512, Mlig455_037593

Neo: -

Age: -

 GLUD1 0.953 - - - - - 0.953

Mlig455_037512 {REF} {Length: 3362} {TRANSSPLICED} {Pfam: Glu/Leu/Phe/Val dehydrogenase, dimerisation domain [PF02812.20, score=195.9]; Glutamate/Leucine/Phenylalanine/Valine dehydrogenase [PF00208.23, score=171.1]} {Human: ENSG00000148672, GLUD1, glutamate dehydrogenase 1, [RH, Score=770, Expect=0.0]; ENSG00000182890, GLUD2, glutamate dehydrogenase 2, [RH, Score=762, Expect=0.0]} {Mouse: ENSMUSG00000021794, Glud1, glutamate dehydrogenase 1, [RH, Score=774, Expect=0.0]} {Dmel: FBgn0001098, Gdh, Glutamate dehydrogenase, [RH, Score=758, Expect=0.0]} {Celegans: WBGene00014095, gdh-1, Glutamate dehydrogenase, [RH, Score=646, Expect=0.0]} {Smed: dd_Smed_v6_932_0_1, dd_Smed_v6_932_0_1, [RH, Score=730, Expect=0.0]} {RNA1509_33112, RNA1509_40804, RNA1509_4202} {RNA1310_4820.1, RNA1509_33112, RNA1509_40804, RNA1509_4202} {RNA1509_33112, RNA1509_40804, RNA1509_4202, RNA815_2103.3}

Mlig455_037593 {REF} {Length: 3377} {TRANSSPLICED} {Pfam: Glu/Leu/Phe/Val dehydrogenase, dimerisation domain [PF02812.20, score=195.9]; Glutamate/Leucine/Phenylalanine/Valine dehydrogenase [PF00208.23, score=171.1]} {Human: ENSG00000148672, GLUD1, glutamate dehydrogenase 1, [RH, Score=770, Expect=0.0]; ENSG00000182890, GLUD2, glutamate dehydrogenase 2, [RH, Score=762, Expect=0.0]} {Mouse: ENSMUSG00000021794, Glud1, glutamate dehydrogenase 1, [RH, Score=774, Expect=0.0]} {Dmel: FBgn0001098, Gdh, Glutamate dehydrogenase, [RH, Score=758, Expect=0.0]} {Celegans: WBGene00014095, gdh-1, Glutamate dehydrogenase, [RH, Score=646, Expect=0.0]} {Smed: dd_Smed_v6_932_0_1, dd_Smed_v6_932_0_1, [RH, Score=730, Expect=0.0]} {RNA1509_13169, RNA1509_26573, RNA1509_4202, RNA1509_48691, RNA1509_55996} {RNA1310_4820.1, RNA1509_13169, RNA1509_26573, RNA1509_48691, RNA1509_55996} {RNA1509_13169, RNA1509_26573, RNA1509_48691, RNA1509_55996, RNA815_2103.3}

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