TomoSeq data search

Data search

Results for MligTC455_20172

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_20172

1589

33.11

Mlig455_047842, Mlig455_047912, Mlig455_048000

Neo: -

Age: -

MRPL21

Mlig455_047842 {REF} {Length: 909} {TRANSSPLICED} {Pfam: Ribosomal prokaryotic L21 protein [PF00829.23, score=80.9]} {Human: ENSG00000197345, MRPL21, mitochondrial ribosomal protein L21, [RH, Score=85.9, Expect=4e-20]} {Mouse: ENSMUSG00000024829, Mrpl21, mitochondrial ribosomal protein L21, [RH, Score=78.6, Expect=1e-17]} {Dmel: FBgn0036853, mRpL21, mitochondrial ribosomal protein L21, [RH, Score=104, Expect=2e-27]} {Celegans: WBGene00023422, mrpl-21, Mitochondrial Ribosomal Protein, Large, [RH, Score=93.6, Expect=8e-24]} {Smed: dd_Smed_v6_2553_0_1, dd_Smed_v6_2553_0_1, [RH, Score=90.5, Expect=2e-22]} {RNA1509_35093} {RNA1310_39598} {RNA815_18919}

Mlig455_047912 {REF} {Length: 910} {TRANSSPLICED} {Pfam: Ribosomal prokaryotic L21 protein [PF00829.23, score=80.7]} {Human: ENSG00000197345, MRPL21, mitochondrial ribosomal protein L21, [RH, Score=85.9, Expect=4e-20]} {Mouse: ENSMUSG00000024829, Mrpl21, mitochondrial ribosomal protein L21, [RH, Score=78.6, Expect=1e-17]} {Dmel: FBgn0036853, mRpL21, mitochondrial ribosomal protein L21, [RH, Score=105, Expect=7e-28]} {Celegans: WBGene00023422, mrpl-21, Mitochondrial Ribosomal Protein, Large, [RH, Score=93.2, Expect=9e-24]} {Smed: dd_Smed_v6_2553_0_1, dd_Smed_v6_2553_0_1, [RH, Score=92.8, Expect=3e-23]} {RNA1509_26455, RNA1509_35093} {RNA1310_39598, RNA1509_26455, RNA1509_35093} {RNA1509_26455, RNA1509_35093, RNA815_18919}

Mlig455_048000 {REF} {Length: 910} {TRANSSPLICED} {Pfam: Ribosomal prokaryotic L21 protein [PF00829.23, score=80.1]} {Human: ENSG00000197345, MRPL21, mitochondrial ribosomal protein L21, [RH, Score=84.7, Expect=9e-20]} {Mouse: ENSMUSG00000024829, Mrpl21, mitochondrial ribosomal protein L21, [RH, Score=77.4, Expect=4e-17]} {Dmel: FBgn0036853, mRpL21, mitochondrial ribosomal protein L21, [RH, Score=106, Expect=2e-28]} {Celegans: WBGene00023422, mrpl-21, Mitochondrial Ribosomal Protein, Large, [RH, Score=92.0, Expect=3e-23]} {Smed: dd_Smed_v6_2553_0_1, dd_Smed_v6_2553_0_1, [RH, Score=92.4, Expect=4e-23]} {RNA1509_35093} {RNA1310_39598} {RNA815_18919}

Cumulative graph for MligTC455_20172

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.715	5.298	0.38322	1.00000
RegionR2	-0.509	5.298	0.28705	0.67496
RegionR3	0.079	5.298	0.83228	1.00000
RegionR4	0.554	5.298	0.19231	0.46858
RegionR5	0.942	5.298	0.00554	0.03751
RegionR6	-0.109	5.298	0.78358	1.00000
RegionR7	0.092	5.298	0.82915	1.00000
RegionR8	-0.335	5.298	0.52179	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-7.713	5.298	0.03003	0.62842
RegenerationR2	0.327	5.298	0.46256	0.85366
RegenerationR3	0.709	5.298	0.13489	0.55877
RegenerationR4	0.447	5.298	0.34424	0.77554
RegenerationR5	0.193	5.298	0.65547	0.93412
RegenerationR6	0.857	5.298	0.06698	0.32443
RegenerationBL	0.151	5.298	0.74671	1.00000
RegenerationTP	0.939	5.298	0.05026	0.36794

Genes with expression patterns similar to MligTC455_20172

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_20172	1589	33.11	Mlig455_047842, Mlig455_047912, Mlig455_048000	Neo: - Age: -	MRPL21	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_047842 {REF} {Length: 909} {TRANSSPLICED} {Pfam: Ribosomal prokaryotic L21 protein [PF00829.23, score=80.9]} {Human: ENSG00000197345, MRPL21, mitochondrial ribosomal protein L21, [RH, Score=85.9, Expect=4e-20]} {Mouse: ENSMUSG00000024829, Mrpl21, mitochondrial ribosomal protein L21, [RH, Score=78.6, Expect=1e-17]} {Dmel: FBgn0036853, mRpL21, mitochondrial ribosomal protein L21, [RH, Score=104, Expect=2e-27]} {Celegans: WBGene00023422, mrpl-21, Mitochondrial Ribosomal Protein, Large, [RH, Score=93.6, Expect=8e-24]} {Smed: dd_Smed_v6_2553_0_1, dd_Smed_v6_2553_0_1, [RH, Score=90.5, Expect=2e-22]} {RNA1509_35093} {RNA1310_39598} {RNA815_18919} Mlig455_047912 {REF} {Length: 910} {TRANSSPLICED} {Pfam: Ribosomal prokaryotic L21 protein [PF00829.23, score=80.7]} {Human: ENSG00000197345, MRPL21, mitochondrial ribosomal protein L21, [RH, Score=85.9, Expect=4e-20]} {Mouse: ENSMUSG00000024829, Mrpl21, mitochondrial ribosomal protein L21, [RH, Score=78.6, Expect=1e-17]} {Dmel: FBgn0036853, mRpL21, mitochondrial ribosomal protein L21, [RH, Score=105, Expect=7e-28]} {Celegans: WBGene00023422, mrpl-21, Mitochondrial Ribosomal Protein, Large, [RH, Score=93.2, Expect=9e-24]} {Smed: dd_Smed_v6_2553_0_1, dd_Smed_v6_2553_0_1, [RH, Score=92.8, Expect=3e-23]} {RNA1509_26455, RNA1509_35093} {RNA1310_39598, RNA1509_26455, RNA1509_35093} {RNA1509_26455, RNA1509_35093, RNA815_18919} Mlig455_048000 {REF} {Length: 910} {TRANSSPLICED} {Pfam: Ribosomal prokaryotic L21 protein [PF00829.23, score=80.1]} {Human: ENSG00000197345, MRPL21, mitochondrial ribosomal protein L21, [RH, Score=84.7, Expect=9e-20]} {Mouse: ENSMUSG00000024829, Mrpl21, mitochondrial ribosomal protein L21, [RH, Score=77.4, Expect=4e-17]} {Dmel: FBgn0036853, mRpL21, mitochondrial ribosomal protein L21, [RH, Score=106, Expect=2e-28]} {Celegans: WBGene00023422, mrpl-21, Mitochondrial Ribosomal Protein, Large, [RH, Score=92.0, Expect=3e-23]} {Smed: dd_Smed_v6_2553_0_1, dd_Smed_v6_2553_0_1, [RH, Score=92.4, Expect=4e-23]} {RNA1509_35093} {RNA1310_39598} {RNA815_18919}
2.	MligTC455_18851	1893	39.44	Mlig455_003970	Neo: - Age: Down-Down-Up, logFC(26M/2M)=0.269 Region-enriched R5: 1.923/0.00000 Region-enriched R4: 1.440/0.00007	MRPL45	2.532	0.706	-	-	-	0.876	0.950	Mlig455_003970 {REF} {Length: 1106} {TRANSSPLICED} {Human: ENSG00000277936, MRPL45, mitochondrial ribosomal protein L45, [RH, Score=62.0, Expect=2e-10]; ENSG00000278845, MRPL45, mitochondrial ribosomal protein L45, [RH, Score=62.0, Expect=2e-10]} {Mouse: ENSMUSG00000018882, Mrpl45, mitochondrial ribosomal protein L45, [RH, Score=57.8, Expect=3e-09]} {Dmel: FBgn0263863, mRpL45, mitochondrial ribosomal protein L45, [RH, Score=74.3, Expect=9e-15]} {Celegans: WBGene00022493, mrpl-45, Probable 39S ribosomal protein L45, mitochondrial, [RH, Score=75.1, Expect=3e-15]} {Smed: dd_Smed_v6_2740_0_1, dd_Smed_v6_2740_0_1, [RH, Score=64.7, Expect=6e-12]} {RNA1509_16114, RNA1509_59577, RNA1509_6788} {RNA1310_30839, RNA1509_16114, RNA1509_59577, RNA1509_6788} {RNA1509_16114, RNA1509_59577, RNA1509_6788, RNA815_14208}
3.	MligTC455_45199	1733	36.11	Mlig455_013632	Neo: Int S/G2/M Age: -	TSR1	1.787	-	-	0.951	-	-	0.836	Mlig455_013632 {REF} {Length: 2461} {TRANSSPLICED} {Pfam: 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal [PF04950.14, score=251.8]} {Human: ENSG00000167721, TSR1, TSR1, ribosome maturation factor, [RH, Score=220, Expect=8e-61]} {Mouse: ENSMUSG00000038335, Tsr1, TSR1 20S rRNA accumulation, [RH, Score=223, Expect=6e-62]} {Dmel: FBgn0037073, Tsr1, Tsr1 ribosome assembly factor, [RH, Score=214, Expect=8e-59]} {Celegans: WBGene00006497, tag-151, Pre-rRNA-processing protein TSR1 homolog, [RH, Score=209, Expect=1e-57]} {Smed: dd_Smed_v6_5502_0_1, dd_Smed_v6_5502_0_1, [RH, Score=180, Expect=2e-47]} {RNA1509_16656, RNA1509_48941} {RNA1310_1517, RNA1509_48941} {RNA1509_48941, RNA815_3245}
4.	MligTC455_43821	1554	32.37	Mlig455_005630	Neo: Int S/G2/M Age: Down-Up-Down	CCDC58	1.783	0.827	-	-	-	-	0.956	Mlig455_005630 {REF} {Length: 1315} {Pfam: Caffeine-induced death protein 2 [PF09774.11, score=44.3]} {Human: ENSG00000160124, CCDC58, coiled-coil domain containing 58, [RH, Score=83.2, Expect=2e-20]} {Mouse: ENSMUSG00000075229, Ccdc58, coiled-coil domain containing 58, [RH, Score=83.2, Expect=1e-20]} {Smed: dd_Smed_v6_1983_0_1, dd_Smed_v6_1983_0_1, [Score=115, Expect=1e-33]} {RNA1509_4305} {RNA1310_25525.2} {RNA815_11738.3}
5.	MligTC455_42556	670	13.96	Mlig455_011300, Mlig455_011389	Neo: - Age: Down-Up-Up Region-enriched R5: 1.899/0.01992		1.67	-	-	-	0.718	-	0.952	Mlig455_011300 {REF} {Length: 1287} {TRANSSPLICED} {Pfam: TruB family pseudouridylate synthase (N terminal domain) [PF01509.20, score=21.1]} {Smed: dd_Smed_v6_6947_0_1, dd_Smed_v6_6947_0_1, [RH, Score=148, Expect=2e-41]} {RNA1509_30949} {RNA1310_27002} {RNA815_32319} Mlig455_011389 {REF} {Length: 1294} {TRANSSPLICED} {Pfam: TruB family pseudouridylate synthase (N terminal domain) [PF01509.20, score=21.1]} {Smed: dd_Smed_v6_6947_0_1, dd_Smed_v6_6947_0_1, [RH, Score=148, Expect=2e-41]} {RNA1509_30949} {RNA1310_27002, RNA1509_30949} {RNA1509_30949, RNA815_32319}
6.	MligTC455_04177	531	11.06	Mlig455_054478	Neo: - Age: -	CNNM2	0.967	-	-	-	-	0.967	-	Mlig455_054478 {REF} {Length: 4622} {TRANSSPLICED} {Pfam: Cyclin M transmembrane N-terminal domain [PF01595.22, score=66.5]; CBS domain [PF00571.30, score=29.8]} {Human: ENSG00000148842, CNNM2, cyclin and CBS domain divalent metal cation transport mediator 2, [Score=344, Expect=1e-105]; ENSG00000158158, CNNM4, cyclin and CBS domain divalent metal cation transport mediator 4, [Score=329, Expect=7e-101]} {Mouse: ENSMUSG00000064105, Cnnm2, cyclin M2, [Score=343, Expect=2e-105]; ENSMUSG00000037408, Cnnm4, cyclin M4, [Score=326, Expect=6e-100]} {Dmel: FBgn0262124, uex, unextended, [Score=343, Expect=9e-106]} {Celegans: WBGene00016879, cnnm-1, Metal transporter cnnm-1, [Score=258, Expect=1e-74]} {Smed: dd_Smed_v6_6903_0_1, dd_Smed_v6_6903_0_1, [Score=367, Expect=2e-115]} {RNA1509_9183} {RNA1310_7581.1} {RNA815_1409.1}
7.	MligTC455_53454	2278	47.46	Mlig455_017242	Neo: Neoblast Age: logFC(26M/2M)=0.158	EPRS	0.955	-	-	-	-	-	0.955	Mlig455_017242 {REF} {Length: 2521} {TRANSSPLICED} {Pfam: Prolyl-tRNA synthetase, C-terminal [PF09180.13, score=78.4]; tRNA synthetase class II core domain (G, H, P, S and T) [PF00587.27, score=60.3]; Anticodon binding domain [PF03129.22, score=58.5]; WHEP-TRS domain [PF00458.22, score=49.4]} {Human: ENSG00000136628, EPRS, glutamyl-prolyl-tRNA synthetase, [Score=729, Expect=0.0]} {Mouse: ENSMUSG00000026615, Eprs, glutamyl-prolyl-tRNA synthetase, [Score=718, Expect=0.0]} {Dmel: FBgn0005674, GluProRS, Glutamyl-prolyl-tRNA synthetase, [RH, Score=746, Expect=0.0]} {Celegans: WBGene00004189, pars-1, Prolyl Amino-acyl tRNA Synthetase, [RH, Score=656, Expect=0.0]} {Smed: dd_Smed_v6_2488_0_1, dd_Smed_v6_2488_0_1, [Score=655, Expect=0.0]} {RNA1509_19958, RNA1509_2867, RNA1509_45772, RNA1509_59758, RNA1509_6437} {RNA1310_8457.1, RNA1509_19958, RNA1509_2867, RNA1509_45772, RNA1509_59758, RNA1509_6437} {RNA1509_19958, RNA1509_2867, RNA1509_45772, RNA1509_59758, RNA1509_6437, RNA815_2749}
8.	MligTC455_28520	2013	41.93	Mlig455_052699	Neo: Neoblast Age: Down-Down-Up Region-enriched R4: 1.382/0.00004	SEM1	0.954	-	-	-	-	-	0.954	Mlig455_052699 {REF} {Length: 1402} {Pfam: DSS1/SEM1 family [PF05160.15, score=78.0]} {Human: ENSG00000127922, SEM1, SEM1, 26S proteasome complex subunit, [RH, Score=60.1, Expect=2e-12]} {Mouse: ENSMUSG00000042541, Sem1, SEM1, 26S proteasome complex subunit, [RH, Score=60.1, Expect=1e-12]} {Dmel: FBgn0266666, Sem1, Suppressor of exocyst mutations 1, [RH, Score=50.1, Expect=9e-09]} {Celegans: WBGene00022492, dss-1, Probable 26S proteasome complex subunit dss-1, [Score=48.9, Expect=2e-08]} {Smed: dd_Smed_v6_1550_0_1, dd_Smed_v6_1550_0_1, [RH, Score=72.4, Expect=1e-17]} {RNA1509_14991, RNA1509_48638} {RNA1310_33997.1, RNA1509_14991} {RNA1509_14991, RNA815_15780.3}

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