TomoSeq data search

Data search

Results for MligTC455_20191

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_20191

2298

47.88

Mlig455_063615

Neo: -

Age: -

PPM1A

Mlig455_063615 {REF} {Length: 3786} {Pfam: Protein phosphatase 2C [PF00481.23, score=271.3]; Protein serine/threonine phosphatase 2C, C-terminal domain [PF07830.15, score=65.2]; Protein phosphatase 2C [PF13672.8, score=20.9]} {Human: ENSG00000100614, PPM1A, protein phosphatase, Mg2+/Mn2+ dependent 1A, [RH, Score=445, Expect=4e-155]; ENSG00000138032, PPM1B, protein phosphatase, Mg2+/Mn2+ dependent 1B, [RH, Score=443, Expect=8e-154]; ENSG00000285542, AC013717.1, novel protein, PPM1B-SLC3A1 readthrough, [RH, Score=440, Expect=3e-154]} {Mouse: ENSMUSG00000061130, Ppm1b, protein phosphatase 1B, magnesium dependent, beta isoform, [RH, Score=447, Expect=1e-155]; ENSMUSG00000021096, Ppm1a, protein phosphatase 1A, magnesium dependent, alpha isoform, [RH, Score=443, Expect=1e-155]} {Dmel: FBgn0086361, alph, alphabet, [RH, Score=400, Expect=9e-139]} {Celegans: WBGene00006460, ppm-1, Protein phosphatase ppm-1, [RH, Score=305, Expect=3e-100]} {Smed: dd_Smed_v6_286_0_1, dd_Smed_v6_286_0_1, [RH, Score=488, Expect=8e-174]} {RNA1509_13047, RNA1509_43708, RNA1509_44964, RNA1509_6320} {RNA1310_2942, RNA1509_13047, RNA1509_43708, RNA1509_44964, RNA1509_6320} {RNA1509_13047, RNA1509_43708, RNA1509_44964, RNA1509_6320, RNA815_9368}

Cumulative graph for MligTC455_20191

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.725	5.713	0.29762	0.94763
RegionR2	-0.213	5.713	0.51832	0.89345
RegionR3	0.219	5.713	0.40428	0.93193
RegionR4	0.189	5.713	0.55051	0.87119
RegionR5	0.132	5.713	0.59694	0.95476
RegionR6	0.198	5.713	0.45981	1.00000
RegionR7	-0.014	5.713	0.96507	1.00000
RegionR8	0.213	5.713	0.57349	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.071	5.713	0.20499	0.94513
RegenerationR2	0.171	5.713	0.56561	0.90107
RegenerationR3	0.068	5.713	0.82981	0.99077
RegenerationR4	0.205	5.713	0.52845	0.88358
RegenerationR5	0.244	5.713	0.41924	0.81065
RegenerationR6	0.086	5.713	0.78347	0.96920
RegenerationBL	0.195	5.713	0.54602	0.90327
RegenerationTP	0.211	5.713	0.55573	0.93688

Genes with expression patterns similar to MligTC455_20191

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_20191	2298	47.88	Mlig455_063615	Neo: - Age: -	PPM1A	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_063615 {REF} {Length: 3786} {Pfam: Protein phosphatase 2C [PF00481.23, score=271.3]; Protein serine/threonine phosphatase 2C, C-terminal domain [PF07830.15, score=65.2]; Protein phosphatase 2C [PF13672.8, score=20.9]} {Human: ENSG00000100614, PPM1A, protein phosphatase, Mg2+/Mn2+ dependent 1A, [RH, Score=445, Expect=4e-155]; ENSG00000138032, PPM1B, protein phosphatase, Mg2+/Mn2+ dependent 1B, [RH, Score=443, Expect=8e-154]; ENSG00000285542, AC013717.1, novel protein, PPM1B-SLC3A1 readthrough, [RH, Score=440, Expect=3e-154]} {Mouse: ENSMUSG00000061130, Ppm1b, protein phosphatase 1B, magnesium dependent, beta isoform, [RH, Score=447, Expect=1e-155]; ENSMUSG00000021096, Ppm1a, protein phosphatase 1A, magnesium dependent, alpha isoform, [RH, Score=443, Expect=1e-155]} {Dmel: FBgn0086361, alph, alphabet, [RH, Score=400, Expect=9e-139]} {Celegans: WBGene00006460, ppm-1, Protein phosphatase ppm-1, [RH, Score=305, Expect=3e-100]} {Smed: dd_Smed_v6_286_0_1, dd_Smed_v6_286_0_1, [RH, Score=488, Expect=8e-174]} {RNA1509_13047, RNA1509_43708, RNA1509_44964, RNA1509_6320} {RNA1310_2942, RNA1509_13047, RNA1509_43708, RNA1509_44964, RNA1509_6320} {RNA1509_13047, RNA1509_43708, RNA1509_44964, RNA1509_6320, RNA815_9368}
2.	MligTC455_24133	1169	24.36	Mlig455_029898	Neo: - Age: -	BAG4	0.96	-	-	-	-	0.960	-	Mlig455_029898 {REF} {Length: 2903} {TRANSSPLICED} {Pfam: BAG domain [PF02179.18, score=66.0]; WW domain [PF00397.28, score=41.9]} {Human: ENSG00000156735, BAG4, BCL2 associated athanogene 4, [RH, Score=64.7, Expect=2e-11]} {Mouse: ENSMUSG00000037316, Bag4, BCL2-associated athanogene 4, [RH, Score=64.3, Expect=2e-11]} {Dmel: FBgn0086708, stv, starvin, [RH, Score=68.2, Expect=7e-13]} {Celegans: WBGene00007009, wwp-1, E3 ubiquitin-protein ligase, [Score=52.0, Expect=2e-07]} {Smed: dd_Smed_v6_3939_0_1, dd_Smed_v6_3939_0_1, [Score=123, Expect=4e-34]} {RNA1509_15157, RNA1509_39211, RNA1509_52060, RNA1509_52741} {RNA1310_20817, RNA1509_15157, RNA1509_39211, RNA1509_52060, RNA1509_52741} {RNA1509_15157, RNA1509_39211, RNA1509_52060, RNA1509_52741, RNA815_20205}
3.	MligTC455_50361	844	17.58	Mlig455_000622	Neo: - Age: Down-Up-Down	DUSP22	0.96	-	-	-	-	0.960	-	Mlig455_000622 {REF} {Length: 2298} {TRANSSPLICED} {Pfam: Dual specificity phosphatase, catalytic domain [PF00782.22, score=89.4]} {Human: ENSG00000112679, DUSP22, dual specificity phosphatase 22, [RH, Score=119, Expect=1e-32]} {Mouse: ENSMUSG00000069255, Dusp22, dual specificity phosphatase 22, [RH, Score=120, Expect=3e-33]} {Dmel: FBgn0036369, CG10089, [RH, Score=103, Expect=6e-25]} {Celegans: WBGene00006923, vhp-1, Tyrosine-protein phosphatase vhp-1, [Score=86.3, Expect=6e-19]} {Smed: dd_Smed_v6_4044_0_1, dd_Smed_v6_4044_0_1, [RH, Score=110, Expect=1e-28]} {RNA1509_21493, RNA1509_48380} {RNA1310_34562, RNA1509_21493, RNA1509_48380} {RNA1509_21493, RNA1509_48380, RNA815_16504}
4.	MligTC455_51678	290	6.05	Mlig455_024353	Neo: - Age: -	PRDM1	0.955	-	-	-	-	0.955	-	Mlig455_024353 {REF} {Length: 5035} {Human: ENSG00000057657, PRDM1, PR/SET domain 1, [Score=77.8, Expect=4e-14]} {Mouse: ENSMUSG00000038151, Prdm1, PR domain containing 1, with ZNF domain, [Score=85.1, Expect=2e-16]} {Dmel: FBgn0035625, Blimp-1, [Score=77.8, Expect=2e-14]} {Celegans: WBGene00003847, blmp-1, B lymphocyte-induced maturation protein 1 homolog, [Score=72.4, Expect=7e-13]} {RNA1509_17032} {RNA1310_20903} {RNA815_21750}
5.	MligTC455_46159	1471	30.64	Mlig455_047468	Neo: - Age: Down-Up-Down, logFC(26M/2M)=1.700 Region-enriched R4: 1.770/0.00003	EHD1	0.953	-	-	-	0.953	-	-	Mlig455_047468 {REF} {Length: 3382} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF5600) [PF18150.3, score=143.5]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=62.1]; N-terminal EH-domain containing protein [PF16880.7, score=58.8]; Dynamin family [PF00350.25, score=54.3]; 50S ribosome-binding GTPase [PF01926.25, score=34.5]; Elongation factor Tu GTP binding domain [PF00009.29, score=21.5]; EF hand [PF00036.34, score=20.0]} {Human: ENSG00000110047, EHD1, EH domain containing 1, [RH, Score=709, Expect=0.0]; ENSG00000013016, EHD3, EH domain containing 3, [RH, Score=704, Expect=0.0]; ENSG00000103966, EHD4, EH domain containing 4, [RH, Score=693, Expect=0.0]} {Mouse: ENSMUSG00000024772, Ehd1, EH-domain containing 1, [RH, Score=711, Expect=0.0]; ENSMUSG00000107039, Ehd1, EH-domain containing 1, [RH, Score=711, Expect=0.0]; ENSMUSG00000024065, Ehd3, EH-domain containing 3, [RH, Score=698, Expect=0.0]; ENSMUSG00000027293, Ehd4, EH-domain containing 4, [RH, Score=690, Expect=0.0]} {Dmel: FBgn0016693, Past1, Putative Achaete Scute Target 1, [RH, Score=736, Expect=0.0]} {Celegans: WBGene00004373, rme-1, Receptor Mediated Endocytosis; Receptor-mediated endocytosis 1 isoform I, [RH, Score=729, Expect=0.0]} {Smed: dd_Smed_v6_3148_0_1, dd_Smed_v6_3148_0_1, [RH, Score=741, Expect=0.0]} {RNA1509_2034} {RNA1310_6511.3} {RNA815_5849.2}
6.	MligTC455_26387	380	7.91	Mlig455_022285	Neo: - Age: - Region-enriched R5: 1.260/0.01509		0.952	-	-	-	-	0.952	-	Mlig455_022285 {REF} {Length: 6634} {Smed: dd_Smed_v6_3465_0_1, dd_Smed_v6_3465_0_1, [Score=80.5, Expect=7e-16]} {RNA1509_25635} {RNA1310_9257, RNA1509_25635} {RNA1509_25635, RNA815_5213}
7.	MligTC455_30206	80	1.66	Mlig455_059270	Neo: - Age: Down-Up-Up Regeneration-downregulated R2: -3.810 Regeneration-depleted R2: -3.810		0.95	-	-	-	-	0.950	-	Mlig455_059270 {REF} {Length: 4117} {RNA1509_28299} {RNA1310_622.1, RNA1509_28299} {RNA1509_28299, RNA815_8926}

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