Data search


search
Exact
Search

Results for MligTC455_20320

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_20320 13 0.28 Mlig455_018224

Neo: -

Age: -

Mlig455_018224 {REF} {Length: 1816} {Pfam: EGF-like domain [PF07974.15, score=19.1]} {Dmel: FBgn0004647, N, Notch, [Score=47.0, Expect=1e-05]} {RNA1509_13629} {RNA1310_35652} {RNA815_9200}

Cumulative graph for MligTC455_20320

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.292 0.669 1.00000 1.00000
RegionR2 2.612 0.669 0.99993 1.00000
RegionR3 0.419 0.669 0.99994 1.00000
RegionR4 -2.78 0.669 0.99979 1.00000
RegionR5 -0.788 0.669 0.99987 1.00000
RegionR6 -0.131 0.669 0.99991 1.00000
RegionR7 1.144 0.669 0.99997 1.00000
RegionR8 1.816 0.669 0.99998 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.078 0.669 0.99995 1.00000
RegenerationR2 1.975 0.669 1.00000 1.00000
RegenerationR3 2.513 0.669 1.00000 1.00000
RegenerationR4 1.713 0.669 1.00000 1.00000
RegenerationR5 -0.451 0.669 1.00000 1.00000
RegenerationR6 -0.159 0.669 0.99977 1.00000
RegenerationBL 1.517 0.669 0.99982 1.00000
RegenerationTP 0.463 0.669 0.99992 1.00000


Genes with expression patterns similar to MligTC455_20320

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_20320 13 0.28 Mlig455_018224

Neo: -

Age: -

1 - - - - 1.000 - Mlig455_018224 {REF} {Length: 1816} {Pfam: EGF-like domain [PF07974.15, score=19.1]} {Dmel: FBgn0004647, N, Notch, [Score=47.0, Expect=1e-05]} {RNA1509_13629} {RNA1310_35652} {RNA815_9200}
2. MligTC455_19417 1534 31.96 Mlig455_007980

Neo: -

Age: logFC(26M/2M)=-0.656

0.976 - - - - 0.976 - Mlig455_007980 {REF} {Length: 1518} {Pfam: Profilin [PF00235.21, score=39.6]} {RNA1509_15972} {RNA1310_20911} {RNA815_18294}
3. MligTC455_01586 17 0.35 Mlig455_062265

Neo: -

Age: -

0.971 - - - - 0.971 - Mlig455_062265 {REF} {Length: 834} {NoTransDecoderORF} {RNA1509_53375} {RNA1310_28603.1} {RNA815_45036}
4. MligTC455_18414 1542 32.12 Mlig455_015634

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.362

Regeneration-depleted R6: -5.924
Regeneration-depleted BL: -5.001
Regeneration-depleted R5: -4.376
Regeneration-depleted R4: -3.787
Regeneration-depleted TP: -3.705

KLF1 0.969 - - - - 0.969 - Mlig455_015634 {REF} {Length: 1153} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=57.6]; Zinc-finger double domain [PF13465.8, score=43.1]; C2H2-type zinc finger [PF13894.8, score=35.2]; C2H2-type zinc ribbon [PF15909.7, score=22.4]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=19.2]} {Human: ENSG00000105610, KLF1, Kruppel like factor 1, [Score=129, Expect=2e-35]} {Mouse: ENSMUSG00000054191, Klf1, Kruppel-like factor 1 (erythroid), [Score=119, Expect=1e-31]; ENSMUSG00000003032, Klf4, Kruppel-like factor 4 (gut), [Score=116, Expect=3e-30]; ENSMUSG00000005148, Klf5, Kruppel-like factor 5, [Score=115, Expect=8e-30]; ENSMUSG00000055148, Klf2, Kruppel-like factor 2 (lung), [Score=114, Expect=7e-30]; ENSMUSG00000073209, Klf14, Kruppel-like factor 14, [Score=114, Expect=3e-30]; ENSMUSG00000035397, Klf16, Kruppel-like factor 16, [Score=114, Expect=4e-31]} {Dmel: FBgn0261705, CG42741, [Score=117, Expect=3e-31]} {Celegans: WBGene00003480, klf-3, Kruppel-Like Factor (Zinc finger protein), [Score=119, Expect=1e-32]} {Smed: dd_Smed_v6_12264_0_1, dd_Smed_v6_12264_0_1, [Score=124, Expect=1e-35]} {RNA1509_13465, RNA1509_28695, RNA1509_33725} {RNA1310_3186.1, RNA1509_13465, RNA1509_28695, RNA1509_33725} {RNA1509_13465, RNA1509_28695, RNA1509_33725, RNA815_896.1}
5. MligTC455_24735 1026 21.38 Mlig455_003136

Neo: -

Age: logFC(26M/2M)=-0.296

VWA3B 0.965 - - - - 0.965 - Mlig455_003136 {REF} {Length: 2787} {Pfam: Domain of unknown function (DUF4537) [PF15057.8, score=231.3]; DNA repair protein Crb2 Tudor domain [PF18115.3, score=42.4]; SGF29 tudor-like domain [PF07039.13, score=39.7]; Jumonji domain-containing protein 2A Tudor domain [PF18104.3, score=33.4]; SPX domain [PF03105.21, score=20.6]} {Human: ENSG00000168658, VWA3B, von Willebrand factor A domain containing 3B, [RH, Score=79.7, Expect=4e-15]} {RNA1509_5206} {RNA1310_5951.1, RNA1509_5206} {RNA1509_5206, RNA815_1760.1}
6. MligTC455_26606 1197 24.94 Mlig455_035969

Neo: -

Age: -

0.961 - - - - 0.961 - Mlig455_035969 {REF} {Length: 1942} {RNA1509_10606, RNA1509_25602} {RNA1310_13915, RNA1509_10606, RNA1509_25602} {RNA1509_10606, RNA1509_25602, RNA815_6086}
7. MligTC455_40318 4414 91.96 Mlig455_056386

Neo: -

Age: -

LRRC23 0.96 - - - - 0.960 - Mlig455_056386 {REF} {Length: 1457} {TRANSSPLICED} {Pfam: Leucine Rich repeats (2 copies) [PF12799.9, score=98.6]; Leucine-rich repeat [PF14580.8, score=60.6]; Leucine rich repeat [PF13855.8, score=58.7]; Leucine Rich repeat [PF13516.8, score=38.0]; Leucine Rich Repeat [PF00560.35, score=23.0]} {Human: ENSG00000010626, LRRC23, leucine rich repeat containing 23, [RH, Score=288, Expect=4e-95]} {Mouse: ENSMUSG00000030125, Lrrc23, leucine rich repeat containing 23, [RH, Score=321, Expect=2e-108]} {Dmel: FBgn0085440, Lgr4, Leucine-rich repeat-containing G protein-coupled receptor 4, [Score=54.3, Expect=1e-07]} {Celegans: WBGene00015516, C06A8.6, [Score=102, Expect=1e-24]} {Smed: dd_Smed_v6_8299_0_1, dd_Smed_v6_8299_0_1, [RH, Score=286, Expect=9e-95]} {RNA1509_2421} {RNA1310_22202.1} {RNA815_8780.1}
8. MligTC455_32306 476 9.91 Mlig455_011146

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.714

0.958 - - - - 0.958 - Mlig455_011146 {REF} {Length: 15000} {RNA1509_4044, RNA1509_4722} {RNA1310_655.1, RNA1509_4044} {RNA1509_4044, RNA815_335.1}
9. MligTC455_40317 4609 96.01 Mlig455_036498

Neo: -

Age: logFC(26M/2M)=-0.220

LRRC23 0.958 - - - - 0.958 - Mlig455_036498 {REF} {Length: 1452} {TRANSSPLICED} {Pfam: Leucine Rich repeats (2 copies) [PF12799.9, score=98.6]; Leucine-rich repeat [PF14580.8, score=60.6]; Leucine rich repeat [PF13855.8, score=58.7]; Leucine Rich repeat [PF13516.8, score=38.0]; Leucine Rich Repeat [PF00560.35, score=23.0]} {Human: ENSG00000010626, LRRC23, leucine rich repeat containing 23, [RH, Score=288, Expect=4e-95]} {Mouse: ENSMUSG00000030125, Lrrc23, leucine rich repeat containing 23, [RH, Score=321, Expect=2e-108]} {Dmel: FBgn0085440, Lgr4, Leucine-rich repeat-containing G protein-coupled receptor 4, [Score=54.3, Expect=1e-07]} {Celegans: WBGene00015516, C06A8.6, [Score=102, Expect=1e-24]} {Smed: dd_Smed_v6_8299_0_1, dd_Smed_v6_8299_0_1, [RH, Score=286, Expect=1e-94]} {RNA1509_19139, RNA1509_2421, RNA1509_28075, RNA1509_7420} {RNA1310_22202.1, RNA1509_19139, RNA1509_2421, RNA1509_28075, RNA1509_7420} {RNA1509_19139, RNA1509_2421, RNA1509_28075, RNA1509_7420, RNA815_8780.1}
10. MligTC455_09987 213 4.43 Mlig455_061259

Neo: -

Age: -

0.955 - - - - 0.955 - Mlig455_061259 {REF} {Length: 878} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF14719.8, score=36.3]} {RNA1509_35099} {RNA1310_42966} {RNA815_24864}
11. MligTC455_32309 828 17.24 Mlig455_050857

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.573

ZAN 0.955 - - - - 0.955 - Mlig455_050857 {REF} {Length: 9674} {Human: ENSG00000146839, ZAN, zonadhesin (gene/pseudogene), [Score=57.8, Expect=5e-07]} {RNA1509_20499, RNA1509_31314, RNA1509_37922, RNA1509_38195, RNA1509_458, RNA1509_7032} {RNA1310_3777.1, RNA1509_20499, RNA1509_31314, RNA1509_37922, RNA1509_38195, RNA1509_7032} {RNA1509_20499, RNA1509_31314, RNA1509_37922, RNA1509_38195, RNA1509_7032, RNA815_49.1}
12. MligTC455_44253 3332 69.42 Mlig455_063569

Neo: -

Age: logFC(26M/2M)=-0.289

C4orf47 0.955 - - - - 0.955 - Mlig455_063569 {REF} {Length: 1525} {Pfam: Domain of unknown function (DUF4586) [PF15239.8, score=293.8]} {Human: ENSG00000205129, C4orf47, chromosome 4 open reading frame 47, [RH, Score=239, Expect=3e-77]} {Mouse: ENSMUSG00000071103, 1700029J07Rik, RIKEN cDNA 1700029J07 gene, [RH, Score=249, Expect=4e-81]} {Smed: dd_Smed_v6_8186_0_1, dd_Smed_v6_8186_0_1, [RH, Score=325, Expect=1e-111]} {RNA1509_16398, RNA1509_21810, RNA1509_2400} {RNA1310_20012, RNA1509_16398, RNA1509_21810, RNA1509_2400} {RNA1509_16398, RNA1509_21810, RNA1509_2400, RNA815_7964}
13. MligTC455_44252 3395 70.73 Mlig455_028205

Neo: -

Age: logFC(26M/2M)=-0.233

C4orf47 0.954 - - - - 0.954 - Mlig455_028205 {REF} {Length: 1511} {Pfam: Domain of unknown function (DUF4586) [PF15239.8, score=294.8]} {Human: ENSG00000205129, C4orf47, chromosome 4 open reading frame 47, [RH, Score=239, Expect=4e-77]} {Mouse: ENSMUSG00000071103, 1700029J07Rik, RIKEN cDNA 1700029J07 gene, [RH, Score=249, Expect=3e-81]} {Smed: dd_Smed_v6_8186_0_1, dd_Smed_v6_8186_0_1, [RH, Score=326, Expect=5e-112]} {RNA1509_2400} {RNA1310_20012} {RNA815_7964}
14. MligTC455_50677 3742 77.95 Mlig455_024461

Neo: -

Age: -

IQCD 0.954 - - - - 0.954 - Mlig455_024461 {REF} {Length: 1834} {TRANSSPLICED} {Pfam: IQ calmodulin-binding motif [PF00612.29, score=23.1]; Protein of unknown function (DUF3584) [PF12128.10, score=18.7]} {Human: ENSG00000166578, IQCD, IQ motif containing D, [RH, Score=225, Expect=3e-68]} {Mouse: ENSMUSG00000029601, Iqcd, IQ motif containing D, [RH, Score=204, Expect=3e-60]} {Dmel: FBgn0033705, CG13168, [Score=47.8, Expect=1e-05]} {Smed: dd_Smed_v6_7079_0_1, dd_Smed_v6_7079_0_1, [RH, Score=296, Expect=2e-95]} {RNA1509_13541, RNA1509_17315, RNA1509_17777, RNA1509_1833, RNA1509_20931} {RNA1310_4220.1, RNA1509_13541, RNA1509_17315, RNA1509_17777, RNA1509_1833, RNA1509_20931} {RNA1509_13541, RNA1509_17315, RNA1509_17777, RNA1509_1833, RNA1509_20931, RNA815_1223.1}
15. MligTC455_13326 11 0.22 Mlig455_042702

Neo: -

Age: -

0.953 - - - - 0.953 - Mlig455_042702 {REF} {Length: 4591} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=136.7]} {Smed: dd_Smed_v6_37545_0_1, dd_Smed_v6_37545_0_1, [Score=56.6, Expect=2e-08]} {RNA1509_30877} {RNA1310_43502} {RNA815_38744}
16. MligTC455_47868 5452 113.57 Mlig455_031216

Neo: -

Age: logFC(26M/2M)=-0.277

TEKT1 0.953 - - - - 0.953 - Mlig455_031216 {REF} {Length: 1751} {TRANSSPLICED} {Pfam: Tektin family [PF03148.16, score=439.2]} {Human: ENSG00000167858, TEKT1, tektin 1, [RH, Score=379, Expect=4e-129]} {Mouse: ENSMUSG00000020799, Tekt1, tektin 1, [RH, Score=373, Expect=9e-127]} {Dmel: FBgn0052820, CG32820, [Score=217, Expect=4e-65]} {Smed: dd_Smed_v6_3287_0_2, dd_Smed_v6_3287_0_2, [RH, Score=448, Expect=1e-156]} {RNA1509_1682, RNA1509_19187, RNA1509_25112, RNA1509_29996, RNA1509_52215} {RNA1310_15062.1, RNA1509_1682, RNA1509_19187, RNA1509_25112, RNA1509_29996, RNA1509_52215} {RNA1509_1682, RNA1509_19187, RNA1509_25112, RNA1509_29996, RNA1509_52215, RNA815_6688}
17. MligTC455_24781 664 13.83 Mlig455_056890

Neo: -

Age: -

TTLL3 0.952 - - - - 0.952 - Mlig455_056890 {REF} {Length: 4523} {TRANSSPLICED} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=246.0]; YheC/D like ATP-grasp [PF14398.8, score=22.3]} {Human: ENSG00000214021, TTLL3, tubulin tyrosine ligase like 3, [Score=419, Expect=7e-138]; ENSG00000138892, TTLL8, tubulin tyrosine ligase like 8, [Score=417, Expect=5e-133]} {Mouse: ENSMUSG00000030276, Ttll3, tubulin tyrosine ligase-like family, member 3, [Score=451, Expect=3e-145]; ENSMUSG00000022388, Ttll8, tubulin tyrosine ligase-like family, member 8, [Score=434, Expect=8e-140]} {Dmel: FBgn0031854, TTLL3A, Tubulin tyrosine ligase-like 3A, [Score=267, Expect=2e-76]} {Celegans: WBGene00044187, ttll-9, Tubulin Tyrosine Ligase Like, [Score=113, Expect=1e-26]} {Smed: dd_Smed_v6_10244_0_3, dd_Smed_v6_10244_0_3, [Score=549, Expect=0.0]} {RNA1509_39964, RNA1509_51119, RNA1509_8170} {RNA1310_3822, RNA1509_39964, RNA1509_51119} {RNA1509_39964, RNA1509_51119, RNA815_867}
18. MligTC455_48164 1129 23.52 Mlig455_020167

Neo: -

Age: logFC(26M/2M)=-0.425

0.952 - - - - 0.952 - Mlig455_020167 {REF} {Length: 1547} {RNA1509_31892} {RNA1310_30464, RNA1509_31892} {RNA1509_31892, RNA815_28823.1}
19. MligTC455_14484 84 1.75 Mlig455_033326

Neo: -

Age: -

Regeneration-upregulated R2: 3.966

Regeneration-enriched R2: 3.966

0.951 - - - - 0.951 - Mlig455_033326 {REF} {Length: 379} {NoTransDecoderORF} {RNA1509_9817} {RNA1310_60793} {RNA815_8584.1}
20. MligTC455_46563 675 14.06 Mlig455_031729

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.371

0.951 - - - - 0.951 - Mlig455_031729 {REF} {Length: 3393} {RNA1509_50830, RNA1509_9486} {RNA1310_4618, RNA1509_50830} {RNA1509_50830, RNA815_19170}
21. MligTC455_33157 281 5.86 Mlig455_009092

Neo: -

Age: -

0.95 - - - - 0.950 - Mlig455_009092 {REF} {Length: 5302} {RNA1509_51204} {RNA1310_20216} {RNA815_6624}
22. MligTC455_50676 3764 78.41 Mlig455_024344

Neo: -

Age: -

IQCD 0.95 - - - - 0.950 - Mlig455_024344 {REF} {Length: 1834} {TRANSSPLICED} {Pfam: IQ calmodulin-binding motif [PF00612.29, score=23.1]; Protein of unknown function (DUF3584) [PF12128.10, score=18.7]} {Human: ENSG00000166578, IQCD, IQ motif containing D, [RH, Score=225, Expect=3e-68]} {Mouse: ENSMUSG00000029601, Iqcd, IQ motif containing D, [RH, Score=204, Expect=3e-60]} {Dmel: FBgn0033705, CG13168, [Score=47.8, Expect=1e-05]} {Smed: dd_Smed_v6_7079_0_1, dd_Smed_v6_7079_0_1, [RH, Score=296, Expect=2e-95]} {RNA1509_1833, RNA1509_46413} {RNA1310_4220.1, RNA1509_46413} {RNA1509_46413, RNA815_1223.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA