Data search
Results for MligTC455_20510
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_20510 | 653 | 13.61 | Mlig455_059730 | Neo: - Age: - |
Mlig455_059730 {REF} {Length: 2988} {RNA1509_29937, RNA1509_4932} {RNA1310_4192.1, RNA1509_4932} {RNA1509_4932, RNA815_2510} |
Cumulative graph for MligTC455_20510
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.224 | 4.118 | 0.16754 | 0.79180 | |
| RegionR2 | 0.228 | 4.118 | 0.66181 | 0.99334 | |
| RegionR3 | 0.85 | 4.118 | 0.04413 | 0.36693 | |
| RegionR4 | 0.733 | 4.118 | 0.12789 | 0.36158 | |
| RegionR5 | 0.738 | 4.118 | 0.06771 | 0.23236 | |
| RegionR6 | 0.385 | 4.118 | 0.40643 | 0.97634 | |
| RegionR7 | -0.815 | 4.118 | 0.26702 | 0.89729 | |
| RegionR8 | 0.105 | 4.118 | 0.89520 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.503 | 4.118 | 0.83031 | 1.00000 | |
| RegenerationR2 | 0.205 | 4.118 | 0.57080 | 0.90258 | |
| RegenerationR3 | -0.264 | 4.118 | 0.48828 | 0.85377 | |
| RegenerationR4 | -0.15 | 4.118 | 0.70934 | 0.95722 | |
| RegenerationR5 | 0.276 | 4.118 | 0.44955 | 0.83081 | |
| RegenerationR6 | 0.638 | 4.118 | 0.11673 | 0.42021 | |
| RegenerationBL | 0.493 | 4.118 | 0.34512 | 0.71211 | |
| RegenerationTP | 0.574 | 4.118 | 0.35697 | 0.79771 |
Genes with expression patterns similar to MligTC455_20510
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_20510 | 653 | 13.61 | Mlig455_059730 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_059730 {REF} {Length: 2988} {RNA1509_29937, RNA1509_4932} {RNA1310_4192.1, RNA1509_4932} {RNA1509_4932, RNA815_2510} | |
| 2. | MligTC455_27411 | 730 | 15.21 | Mlig455_013620 | Neo: - Age: Up-Down-Down |
TLN1 | 0.963 | - | - | - | 0.963 | - | - | Mlig455_013620 {REF} {Length: 10416} {TRANSSPLICED} {Pfam: I/LWEQ domain [PF01608.19, score=164.4]; Talin, middle domain [PF09141.12, score=97.7]; FERM central domain [PF00373.20, score=81.3]; N-terminal or F0 domain of Talin-head FERM [PF16511.7, score=60.5]; FERM N-terminal domain [PF09379.12, score=33.3]; Vinculin Binding Site [PF08913.12, score=28.0]} {Human: ENSG00000137076, TLN1, talin 1, [Score=1301, Expect=0.0]; ENSG00000171914, TLN2, talin 2, [Score=1278, Expect=0.0]} {Mouse: ENSMUSG00000028465, Tln1, talin 1, [Score=1296, Expect=0.0]; ENSMUSG00000052698, Tln2, talin 2, [Score=1275, Expect=0.0]} {Dmel: FBgn0260442, rhea, [RH, Score=1109, Expect=0.0]} {Celegans: WBGene00006771, tln-1, TaLiN; Talin, [RH, Score=568, Expect=5e-164]} {Smed: dd_Smed_v6_876_0_2, dd_Smed_v6_876_0_2, [RH, Score=894, Expect=0.0]} {RNA1509_15910} {RNA1310_318} {RNA815_75.1} |
| 3. | MligTC455_38730 | 466 | 9.7 | Mlig455_065842 | Neo: Int S/G2/M Age: Up-Down-Down |
FAM135A | 0.957 | - | - | - | 0.957 | - | - | Mlig455_065842 {REF} {Length: 5344} {TRANSSPLICED} {Pfam: Protein FAM135 [PF12394.10, score=57.2]} {Human: ENSG00000082269, FAM135A, family with sequence similarity 135 member A, [RH, Score=185, Expect=8e-51]} {Mouse: ENSMUSG00000026153, Fam135a, family with sequence similarity 135, member A, [Score=174, Expect=4e-45]} {Dmel: FBgn0052333, CG32333, [Score=186, Expect=2e-49]} {Celegans: WBGene00015635, C09D4.4, [Score=52.0, Expect=1e-06]} {Smed: dd_Smed_v6_4890_0_16, dd_Smed_v6_4890_0_16, [Score=154, Expect=4e-39]} {RNA1509_37264} {RNA1310_399.1} {RNA815_1643.1} |
| 4. | MligTC455_50263 | 574 | 11.97 | Mlig455_055664 | Neo: - Age: Down-Down-Up |
TARBP2 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_055664 {REF} {Length: 1663} {TRANSSPLICED} {Pfam: Double-stranded RNA binding motif [PF00035.28, score=62.0]; Staufen C-terminal domain [PF16482.7, score=26.1]} {Human: ENSG00000139546, TARBP2, TARBP2, RISC loading complex RNA binding subunit, [RH, Score=62.0, Expect=2e-11]} {Mouse: ENSMUSG00000023051, Tarbp2, TARBP2, RISC loading complex RNA binding subunit, [Score=81.6, Expect=1e-17]} {Dmel: FBgn0032515, loqs, loquacious, [RH, Score=121, Expect=2e-30]} {Smed: dd_Smed_v6_9213_0_1, dd_Smed_v6_9213_0_1, [RH, Score=157, Expect=1e-44]} {RNA1509_37226} {RNA1310_1441.1, RNA1509_37226} {RNA1509_37226, RNA815_48096} |
Berezikov Lab - 2020-2021 © ERIBA