M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_20523

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_20523 29 0.61 Mlig455_008654

Neo: -

Age: -

Region-enriched R4: 9.558/0.00005
Region-enriched R5: 3.537/0.03323

 Mlig455_008654 {REF} {Length: 1777} {RNA1509_50917} {RNA1310_60341} {RNA815_26129.1}

Cumulative graph for MligTC455_20523

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.573 1.073 1.00000 1.00000
RegionR2 -3.21 1.073 0.99215 1.00000
RegionR3 -0.225 1.073 0.79230 1.00000
RegionR4 9.558 1.073 0.00000 0.00005
RegionR5 3.537 1.073 0.00474 0.03323
RegionR6 0.723 1.073 0.64903 1.00000
RegionR7 -4.503 1.073 1.00000 1.00000
RegionR8 -4.307 1.073 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.492 1.073 1.00000 1.00000
RegenerationR2 -1.118 1.073 0.18139 0.62425
RegenerationR3 -3.092 1.073 0.03057 0.31326
RegenerationR4 -4.256 1.073 0.00157 0.04789
RegenerationR5 -4.041 1.073 0.00047 0.03548
RegenerationR6 -2.321 1.073 0.06187 0.31210
RegenerationBL 1.904 1.073 0.36378 0.73218
RegenerationTP -2.907 1.073 1.00000 1.00000


Genes with expression patterns similar to MligTC455_20523

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_20523 29 0.61 Mlig455_008654

Neo: -

Age: -

Region-enriched R4: 9.558/0.00005
Region-enriched R5: 3.537/0.03323

 1 - - - 1.000 - - Mlig455_008654 {REF} {Length: 1777} {RNA1509_50917} {RNA1310_60341} {RNA815_26129.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA