TomoSeq data search

Data search

Results for MligTC455_20570

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_20570

99

2.07

Mlig455_016631, Mlig455_035600

Neo: -

Age: -

IRX6

Mlig455_016631 {REF} {Length: 1632} {Pfam: Homeobox KN domain [PF05920.13, score=52.1]; Homeodomain [PF00046.31, score=26.9]} {Human: ENSG00000159387, IRX6, iroquois homeobox 6, [Score=126, Expect=8e-33]; ENSG00000170561, IRX2, iroquois homeobox 2, [Score=120, Expect=1e-30]} {Mouse: ENSMUSG00000031738, Irx6, Iroquois homeobox 6, [Score=122, Expect=1e-31]; ENSMUSG00000001504, Irx2, Iroquois homeobox 2, [Score=120, Expect=8e-31]; ENSMUSG00000031737, Irx5, Iroquois homeobox 5, [Score=119, Expect=2e-30]; ENSMUSG00000021604, Irx4, Iroquois homeobox 4, [Score=117, Expect=2e-29]; ENSMUSG00000031734, Irx3, Iroquois related homeobox 3, [Score=116, Expect=3e-29]} {Dmel: FBgn0015904, ara, araucan, [Score=121, Expect=1e-30]} {Celegans: WBGene00007984, irx-1, Putative iroquois-class homeodomain protein irx-1, [Score=107, Expect=2e-26]} {Smed: dd_Smed_v6_17352_0_1, dd_Smed_v6_17352_0_1, [Score=129, Expect=1e-34]} {RNA1509_32988} {RNA1310_38999} {RNA815_42442}

Mlig455_035600 {REF} {Length: 1708} {Pfam: Homeobox KN domain [PF05920.13, score=52.1]; Homeodomain [PF00046.31, score=26.9]} {Human: ENSG00000159387, IRX6, iroquois homeobox 6, [Score=126, Expect=9e-33]; ENSG00000170561, IRX2, iroquois homeobox 2, [Score=120, Expect=1e-30]} {Mouse: ENSMUSG00000031738, Irx6, Iroquois homeobox 6, [Score=122, Expect=1e-31]; ENSMUSG00000001504, Irx2, Iroquois homeobox 2, [Score=120, Expect=1e-30]; ENSMUSG00000031737, Irx5, Iroquois homeobox 5, [Score=119, Expect=2e-30]; ENSMUSG00000021604, Irx4, Iroquois homeobox 4, [Score=117, Expect=2e-29]; ENSMUSG00000031734, Irx3, Iroquois related homeobox 3, [Score=116, Expect=3e-29]} {Dmel: FBgn0014343, mirr, mirror, [Score=120, Expect=2e-30]} {Celegans: WBGene00007984, irx-1, Putative iroquois-class homeodomain protein irx-1, [Score=106, Expect=2e-26]} {Smed: dd_Smed_v6_17352_0_1, dd_Smed_v6_17352_0_1, [Score=128, Expect=1e-34]} {RNA1509_26680} {RNA1310_38999} {RNA815_42442}

Cumulative graph for MligTC455_20570

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.014	2.047	1.00000	1.00000
RegionR2	2.351	2.047	0.04589	0.25279
RegionR3	2.012	2.047	0.04203	0.35754
RegionR4	0.803	2.047	0.47036	0.79844
RegionR5	0.313	2.047	0.65460	1.00000
RegionR6	1.423	2.047	0.19944	0.77025
RegionR7	0.071	2.047	0.76461	1.00000
RegionR8	-3.958	2.047	0.99982	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.257	2.047	0.99994	1.00000
RegenerationR2	-1.329	2.047	0.01656	0.21097
RegenerationR3	-1.191	2.047	0.07583	0.45793
RegenerationR4	-0.243	2.047	0.73439	0.96583
RegenerationR5	-0.826	2.047	0.24487	0.67795
RegenerationR6	-1.493	2.047	0.05018	0.28025
RegenerationBL	-3.738	2.047	1.00000	1.00000
RegenerationTP	2.909	2.047	0.14659	0.57011

Genes with expression patterns similar to MligTC455_20570

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_20570	99	2.07	Mlig455_016631, Mlig455_035600	Neo: - Age: -	IRX6	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_016631 {REF} {Length: 1632} {Pfam: Homeobox KN domain [PF05920.13, score=52.1]; Homeodomain [PF00046.31, score=26.9]} {Human: ENSG00000159387, IRX6, iroquois homeobox 6, [Score=126, Expect=8e-33]; ENSG00000170561, IRX2, iroquois homeobox 2, [Score=120, Expect=1e-30]} {Mouse: ENSMUSG00000031738, Irx6, Iroquois homeobox 6, [Score=122, Expect=1e-31]; ENSMUSG00000001504, Irx2, Iroquois homeobox 2, [Score=120, Expect=8e-31]; ENSMUSG00000031737, Irx5, Iroquois homeobox 5, [Score=119, Expect=2e-30]; ENSMUSG00000021604, Irx4, Iroquois homeobox 4, [Score=117, Expect=2e-29]; ENSMUSG00000031734, Irx3, Iroquois related homeobox 3, [Score=116, Expect=3e-29]} {Dmel: FBgn0015904, ara, araucan, [Score=121, Expect=1e-30]} {Celegans: WBGene00007984, irx-1, Putative iroquois-class homeodomain protein irx-1, [Score=107, Expect=2e-26]} {Smed: dd_Smed_v6_17352_0_1, dd_Smed_v6_17352_0_1, [Score=129, Expect=1e-34]} {RNA1509_32988} {RNA1310_38999} {RNA815_42442} Mlig455_035600 {REF} {Length: 1708} {Pfam: Homeobox KN domain [PF05920.13, score=52.1]; Homeodomain [PF00046.31, score=26.9]} {Human: ENSG00000159387, IRX6, iroquois homeobox 6, [Score=126, Expect=9e-33]; ENSG00000170561, IRX2, iroquois homeobox 2, [Score=120, Expect=1e-30]} {Mouse: ENSMUSG00000031738, Irx6, Iroquois homeobox 6, [Score=122, Expect=1e-31]; ENSMUSG00000001504, Irx2, Iroquois homeobox 2, [Score=120, Expect=1e-30]; ENSMUSG00000031737, Irx5, Iroquois homeobox 5, [Score=119, Expect=2e-30]; ENSMUSG00000021604, Irx4, Iroquois homeobox 4, [Score=117, Expect=2e-29]; ENSMUSG00000031734, Irx3, Iroquois related homeobox 3, [Score=116, Expect=3e-29]} {Dmel: FBgn0014343, mirr, mirror, [Score=120, Expect=2e-30]} {Celegans: WBGene00007984, irx-1, Putative iroquois-class homeodomain protein irx-1, [Score=106, Expect=2e-26]} {Smed: dd_Smed_v6_17352_0_1, dd_Smed_v6_17352_0_1, [Score=128, Expect=1e-34]} {RNA1509_26680} {RNA1310_38999} {RNA815_42442}
2.	MligTC455_19647	51	1.06	Mlig455_034716	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.773	CHRNA9	1.681	-	-	-	0.729	0.952	-	Mlig455_034716 {REF} {Length: 2417} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=126.2]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=98.8]} {Human: ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=209, Expect=5e-62]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=206, Expect=5e-61]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=206, Expect=2e-60]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=204, Expect=8e-60]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=202, Expect=8e-59]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=199, Expect=3e-58]} {Mouse: ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=213, Expect=2e-63]; ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=206, Expect=2e-60]} {Dmel: FBgn0000039, nAChRalpha2, nicotinic Acetylcholine Receptor alpha2, [Score=214, Expect=2e-63]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=211, Expect=1e-62]} {Smed: dd_Smed_v6_23922_0_1, dd_Smed_v6_23922_0_1, [Score=201, Expect=1e-58]} {RNA1310_33414.2} {RNA815_34654}
3.	MligTC455_41006	1873	39.01	Mlig455_008635, Mlig455_069404	Neo: - Age: logFC(26M/2M)=-0.328	SLCO5A1	0.965	-	-	-	-	0.965	-	Mlig455_008635 {REF} {Length: 4460} {TRANSSPLICED} {Pfam: Organic Anion Transporter Polypeptide (OATP) family [PF03137.22, score=427.4]; Major Facilitator Superfamily [PF07690.18, score=71.2]} {Human: ENSG00000137571, SLCO5A1, solute carrier organic anion transporter family member 5A1, [Score=322, Expect=2e-95]} {Mouse: ENSMUSG00000025938, Slco5a1, solute carrier organic anion transporter family, member 5A1, [Score=333, Expect=1e-99]} {Dmel: FBgn0032123, Oatp30B, Organic anion transporting polypeptide 30B, [Score=318, Expect=4e-92]} {Celegans: WBGene00018739, F53B1.8, Solute carrier organic anion transporter family member, [Score=228, Expect=1e-62]} {Smed: dd_Smed_v6_8289_0_1, dd_Smed_v6_8289_0_1, [RH, Score=276, Expect=5e-80]} {RNA1509_17028} {RNA1310_5844} {RNA815_3658} Mlig455_069404 {REF} {Length: 4447} {TRANSSPLICED} {Pfam: Organic Anion Transporter Polypeptide (OATP) family [PF03137.22, score=427.1]; Major Facilitator Superfamily [PF07690.18, score=71.2]} {Human: ENSG00000137571, SLCO5A1, solute carrier organic anion transporter family member 5A1, [Score=322, Expect=2e-95]} {Mouse: ENSMUSG00000025938, Slco5a1, solute carrier organic anion transporter family, member 5A1, [Score=332, Expect=1e-99]} {Dmel: FBgn0032123, Oatp30B, Organic anion transporting polypeptide 30B, [Score=319, Expect=7e-93]} {Celegans: WBGene00018739, F53B1.8, Solute carrier organic anion transporter family member, [Score=229, Expect=4e-63]} {Smed: dd_Smed_v6_8289_0_1, dd_Smed_v6_8289_0_1, [Score=275, Expect=1e-79]} {RNA1509_17028, RNA1509_40380} {RNA1310_5844, RNA1509_40380} {RNA1509_40380, RNA815_3658}
4.	MligTC455_36548	178	3.71	Mlig455_068923	Neo: - Age: Up-Down-Up Region-enriched R7: 2.837/0.00002	PRKD3	0.959	-	-	-	-	0.959	-	Mlig455_068923 {REF} {Length: 3375} {Pfam: Protein kinase domain [PF00069.27, score=233.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=118.1]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=86.5]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=23.8]; C1 domain [PF03107.18, score=21.7]} {Human: ENSG00000115825, PRKD3, protein kinase D3, [RH, Score=714, Expect=0.0]; ENSG00000184304, PRKD1, protein kinase D1, [RH, Score=706, Expect=0.0]; ENSG00000105287, PRKD2, protein kinase D2, [RH, Score=688, Expect=0.0]} {Mouse: ENSMUSG00000024070, Prkd3, protein kinase D3, [RH, Score=717, Expect=0.0]; ENSMUSG00000002688, Prkd1, protein kinase D1, [RH, Score=701, Expect=0.0]} {Dmel: FBgn0038603, PKD, Protein Kinase D, [RH, Score=637, Expect=0.0]} {Celegans: WBGene00012019, dkf-2, Serine/threonine-protein kinase dkf-2, [RH, Score=687, Expect=0.0]} {Smed: dd_Smed_v6_6620_0_1, dd_Smed_v6_6620_0_1, [Score=169, Expect=2e-45]} {RNA1509_31101} {RNA1310_7782, RNA1509_31101} {RNA1509_31101, RNA815_11060}
5.	MligTC455_10714	75	1.57	Mlig455_014408, Mlig455_070162	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.165 Region-enriched R4: 4.566/0.03282	RSPH9	0.951	-	-	-	-	-	0.951	Mlig455_014408 {REF} {Length: 742} {TRANSSPLICED} {Pfam: Radial spokehead-like protein [PF04712.14, score=26.0]} {Human: ENSG00000172426, RSPH9, radial spoke head 9 homolog, [Score=122, Expect=6e-33]} {Mouse: ENSMUSG00000023966, Rsph9, radial spoke head 9 homolog (Chlamydomonas), [Score=120, Expect=1e-32]} {Dmel: FBgn0051803, CG31803, [Score=85.1, Expect=2e-19]} {Smed: dd_Smed_v6_4707_0_1, dd_Smed_v6_4707_0_1, [Score=182, Expect=1e-56]} {RNA1509_33851} {RNA1310_6070} {RNA815_13422} Mlig455_070162 {REF} {Length: 1222} {TRANSSPLICED} {Pfam: Radial spokehead-like protein [PF04712.14, score=45.8]} {Human: ENSG00000172426, RSPH9, radial spoke head 9 homolog, [RH, Score=278, Expect=1e-91]} {Mouse: ENSMUSG00000023966, Rsph9, radial spoke head 9 homolog (Chlamydomonas), [RH, Score=270, Expect=1e-88]} {Dmel: FBgn0051803, CG31803, [RH, Score=178, Expect=6e-53]} {Smed: dd_Smed_v6_4707_0_1, dd_Smed_v6_4707_0_1, [RH, Score=364, Expect=6e-126]} {RNA1509_33851} {RNA1310_6070} {RNA815_13422}

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