Data search
Results for MligTC455_20578
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_20578 | 703 | 14.65 | Mlig455_065074 | Neo: Irradiation Age: - Region-enriched R5: 1.229/0.00210 |
CCNG2 | Mlig455_065074 {REF} {Length: 2709} {Pfam: Cyclin, N-terminal domain [PF00134.25, score=40.5]} {Human: ENSG00000138764, CCNG2, cyclin G2, [RH, Score=85.5, Expect=3e-19]} {Mouse: ENSMUSG00000029385, Ccng2, cyclin G2, [Score=85.9, Expect=4e-18]} {Dmel: FBgn0039858, CycG, Cyclin G, [Score=73.2, Expect=1e-13]} {Smed: dd_Smed_v6_6866_0_1, dd_Smed_v6_6866_0_1, [Score=94.7, Expect=2e-21]} {RNA1509_20014} {RNA1310_7666.1, RNA1509_20014} {RNA1509_20014, RNA815_2369} |
Cumulative graph for MligTC455_20578
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.476 | 4.129 | 0.68421 | 1.00000 | |
| RegionR2 | -0.068 | 4.129 | 0.88937 | 1.00000 | |
| RegionR3 | 0.2 | 4.129 | 0.59753 | 1.00000 | |
| RegionR4 | 0.024 | 4.129 | 0.95423 | 1.00000 | |
| RegionR5 | 1.229 | 4.129 | 0.00013 | 0.00210 | |
| RegionR6 | 0.284 | 4.129 | 0.46402 | 1.00000 | |
| RegionR7 | -0.898 | 4.129 | 0.15242 | 0.72354 | |
| RegionR8 | -1.247 | 4.129 | 0.17828 | 0.75942 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.963 | 4.129 | 0.52916 | 1.00000 | |
| RegenerationR2 | -0.736 | 4.129 | 0.04510 | 0.35112 | |
| RegenerationR3 | -0.706 | 4.129 | 0.07494 | 0.45611 | |
| RegenerationR4 | -0.989 | 4.129 | 0.01735 | 0.20648 | |
| RegenerationR5 | -0.256 | 4.129 | 0.43863 | 0.82354 | |
| RegenerationR6 | -0.354 | 4.129 | 0.37505 | 0.71714 | |
| RegenerationBL | -0.851 | 4.129 | 0.22215 | 0.57047 | |
| RegenerationTP | 1.101 | 4.129 | 0.09771 | 0.48900 |
Genes with expression patterns similar to MligTC455_20578
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_20578 | 703 | 14.65 | Mlig455_065074 | Neo: Irradiation Age: - Region-enriched R5: 1.229/0.00210 |
CCNG2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_065074 {REF} {Length: 2709} {Pfam: Cyclin, N-terminal domain [PF00134.25, score=40.5]} {Human: ENSG00000138764, CCNG2, cyclin G2, [RH, Score=85.5, Expect=3e-19]} {Mouse: ENSMUSG00000029385, Ccng2, cyclin G2, [Score=85.9, Expect=4e-18]} {Dmel: FBgn0039858, CycG, Cyclin G, [Score=73.2, Expect=1e-13]} {Smed: dd_Smed_v6_6866_0_1, dd_Smed_v6_6866_0_1, [Score=94.7, Expect=2e-21]} {RNA1509_20014} {RNA1310_7666.1, RNA1509_20014} {RNA1509_20014, RNA815_2369} |
| 2. | MligTC455_15326 | 538 | 11.21 | Mlig455_020216 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.309 Region-enriched R5: 1.591/0.00004 |
2.465 | 0.770 | 0.734 | - | - | 0.961 | - | Mlig455_020216 {REF} {Length: 477} {TRANSSPLICED} {RNA1509_41908} {RNA1310_72816} {RNA815_38767} | |
| 3. | MligTC455_54082 | 468 | 9.75 | Mlig455_064909 | Neo: Irradiation Age: - Region-enriched R5: 2.334/0.00000 |
GFI1 | 1.716 | - | - | 0.965 | - | 0.751 | - | Mlig455_064909 {REF} {Length: 2558} {Pfam: C2H2-type zinc finger [PF13894.8, score=27.8]; Zinc finger, C2H2 type [PF00096.28, score=26.2]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=21.7]} {Human: ENSG00000162676, GFI1, growth factor independent 1 transcriptional repressor, [Score=79.3, Expect=4e-15]; ENSG00000165702, GFI1B, growth factor independent 1B transcriptional repressor, [Score=77.8, Expect=3e-15]} {Mouse: ENSMUSG00000029275, Gfi1, growth factor independent 1 transcription repressor, [Score=80.9, Expect=1e-15]; ENSMUSG00000026815, Gfi1b, growth factor independent 1B, [Score=77.8, Expect=6e-15]} {Dmel: FBgn0051632, sens-2, senseless-2, [Score=85.5, Expect=5e-17]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=80.1, Expect=4e-16]} {Smed: dd_Smed_v6_2946_0_1, dd_Smed_v6_2946_0_1, [RH, Score=182, Expect=7e-51]} {RNA1509_4057} {RNA1310_7337} {RNA815_12480} |
| 4. | MligTC455_54081 | 467 | 9.74 | Mlig455_029686 | Neo: Irradiation Age: Down-Up-Down Region-specific R5: 2.785 Region-enriched R5: 2.356/0.00000 |
GFI1 | 1.71 | - | - | 0.962 | - | 0.748 | - | Mlig455_029686 {REF} {Length: 2343} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=33.7]; C2H2-type zinc finger [PF13894.8, score=30.7]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=21.6]} {Human: ENSG00000162676, GFI1, growth factor independent 1 transcriptional repressor, [Score=80.1, Expect=2e-15]; ENSG00000165702, GFI1B, growth factor independent 1B transcriptional repressor, [Score=78.6, Expect=1e-15]} {Mouse: ENSMUSG00000029275, Gfi1, growth factor independent 1 transcription repressor, [Score=81.6, Expect=5e-16]; ENSMUSG00000026815, Gfi1b, growth factor independent 1B, [Score=78.6, Expect=3e-15]} {Dmel: FBgn0051632, sens-2, senseless-2, [Score=86.7, Expect=1e-17]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=81.3, Expect=2e-16]} {Smed: dd_Smed_v6_2946_0_1, dd_Smed_v6_2946_0_1, [RH, Score=183, Expect=1e-51]} {RNA1509_56333} {RNA1310_7337} {RNA815_12480} |
| 5. | MligTC455_33223 | 688 | 14.34 | Mlig455_015657 | Neo: Irradiation Age: logFC(26M/2M)=0.229 Region-enriched R5: 1.073/0.00622 |
PTPRR | 1.707 | - | - | 0.963 | - | 0.744 | - | Mlig455_015657 {REF} {Length: 2465} {TRANSSPLICED} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=213.1]; Tyrosine phosphatase family [PF13350.8, score=20.6]; Adenovirus E3 region protein CR2 [PF02439.17, score=18.4]} {Human: ENSG00000153233, PTPRR, protein tyrosine phosphatase, receptor type R, [RH, Score=231, Expect=2e-69]} {Mouse: ENSMUSG00000020151, Ptprr, protein tyrosine phosphatase, receptor type, R, [RH, Score=228, Expect=1e-68]} {Dmel: FBgn0028341, Ptpmeg2, Protein tyrosine phosphatase Meg2, [Score=147, Expect=8e-39]} {Celegans: WBGene00004215, ptp-3, Tyrosine-protein phosphatase Lar-like, [Score=152, Expect=1e-39]} {Smed: dd_Smed_v6_8755_0_1, dd_Smed_v6_8755_0_1, [RH, Score=253, Expect=3e-78]} {RNA1509_17885, RNA1509_25026, RNA1509_33486, RNA1509_58461} {RNA1310_7060.1, RNA1509_17885, RNA1509_25026, RNA1509_33486, RNA1509_58461} {RNA1509_17885, RNA1509_25026, RNA1509_33486, RNA1509_58461, RNA815_5407.1} |
| 6. | MligTC455_54184 | 1517 | 31.61 | Mlig455_049784, Mlig455_052892 | Neo: - Age: logFC(26M/2M)=0.203 Region-enriched R6: 1.732/0.00062 |
SEPT7 | 1.67 | - | - | - | 0.716 | - | 0.954 | Mlig455_049784 {REF} {Length: 3762} {TRANSSPLICED} {Pfam: Septin [PF00735.20, score=361.1]; 50S ribosome-binding GTPase [PF01926.25, score=36.0]; AIG1 family [PF04548.18, score=22.4]; RsgA GTPase [PF03193.18, score=22.1]; AAA domain [PF13476.8, score=19.3]; Elongation factor Tu GTP binding domain [PF00009.29, score=18.6]} {Human: ENSG00000122545, SEPT7, septin 7, [RH, Score=476, Expect=7e-165]} {Mouse: ENSMUSG00000001833, Sept7, septin 7, [RH, Score=475, Expect=7e-165]} {Dmel: FBgn0013726, pnut, peanut, [RH, Score=458, Expect=8e-157]} {Celegans: WBGene00006793, unc-59, [RH, Score=334, Expect=1e-109]} {Smed: dd_Smed_v6_2641_0_1, dd_Smed_v6_2641_0_1, [RH, Score=457, Expect=4e-157]} {RNA1509_10031, RNA1509_25851, RNA1509_35477} {RNA1310_14438.1, RNA1509_10031, RNA1509_25851, RNA1509_35477} {RNA1509_10031, RNA1509_25851, RNA1509_35477, RNA815_10203} Mlig455_052892 {REF} {Length: 4030} {TRANSSPLICED} {Pfam: Septin [PF00735.20, score=361.2]; 50S ribosome-binding GTPase [PF01926.25, score=36.0]; AIG1 family [PF04548.18, score=22.4]; RsgA GTPase [PF03193.18, score=22.1]; AAA domain [PF13476.8, score=19.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=18.3]} {Human: ENSG00000122545, SEPT7, septin 7, [RH, Score=475, Expect=1e-164]} {Mouse: ENSMUSG00000001833, Sept7, septin 7, [RH, Score=475, Expect=9e-165]} {Dmel: FBgn0013726, pnut, peanut, [RH, Score=460, Expect=2e-157]} {Celegans: WBGene00006793, unc-59, [RH, Score=334, Expect=2e-109]} {Smed: dd_Smed_v6_2641_0_1, dd_Smed_v6_2641_0_1, [RH, Score=456, Expect=5e-157]} {RNA1509_10031, RNA1509_32674, RNA1509_54877} {RNA1310_14438.1, RNA1509_32674, RNA1509_54877} {RNA1509_32674, RNA1509_54877, RNA815_10203} |
| 7. | MligTC455_44616 | 479 | 9.98 | Mlig455_033771 | Neo: Irradiation Age: - Region-enriched R5: 1.279/0.00108 |
TENT4B | 0.96 | - | - | 0.960 | - | - | - | Mlig455_033771 {REF} {Length: 2918} {TRANSSPLICED} {Pfam: Cid1 family poly A polymerase [PF03828.21, score=52.2]; Nucleotidyltransferase domain [PF01909.25, score=52.0]; TUTase nucleotidyltransferase domain [PF19088.2, score=46.8]} {Human: ENSG00000121274, TENT4B, terminal nucleotidyltransferase 4B, [RH, Score=343, Expect=4e-112]} {Mouse: ENSMUSG00000036779, Tent4b, terminal nucleotidyltransferase 4B, [RH, Score=342, Expect=5e-112]} {Dmel: FBgn0030049, Trf4-1, Topoisomerase related function 4-1, [RH, Score=330, Expect=4e-106]} {Celegans: WBGene00014115, gld-4, Poly(A) RNA polymerase gld-4, [RH, Score=206, Expect=1e-59]} {Smed: dd_Smed_v6_5011_0_1, dd_Smed_v6_5011_0_1, [Score=290, Expect=3e-93]} {RNA1509_20907, RNA1509_24204, RNA1509_41340} {RNA1310_14335, RNA1509_20907, RNA1509_24204, RNA1509_41340} {RNA1509_20907, RNA1509_24204, RNA1509_41340, RNA815_10759} |
| 8. | MligTC455_24780 | 278 | 5.8 | Mlig455_022870 | Neo: - Age: Down-Up-Down |
0.957 | - | - | 0.957 | - | - | - | Mlig455_022870 {REF} {Length: 2838} {TRANSSPLICED} {RNA1509_21907} {RNA1310_13551, RNA1509_21907} {RNA1509_21907, RNA815_4272} | |
| 9. | MligTC455_17948 | 407 | 8.49 | Mlig455_053925, Mlig455_060566 | Neo: Irradiation Age: - Region-enriched R5: 2.149/0.00051 |
0.955 | - | - | - | - | 0.955 | - | Mlig455_053925 {REF} {Length: 1351} {TRANSSPLICED} {Pfam: Transmembrane proteins 230/134 [PF05915.14, score=64.4]} {Dmel: FBgn0035285, CG12025, [RH, Score=61.6, Expect=5e-12]} {RNA1509_55220} {RNA1310_14992.1} {RNA815_11576} Mlig455_060566 {REF} {Length: 1132} {TRANSSPLICED} {Pfam: Transmembrane proteins 230/134 [PF05915.14, score=64.4]} {Dmel: FBgn0035285, CG12025, [RH, Score=61.6, Expect=5e-12]} {RNA1509_55220} {RNA1310_14992.1} {RNA815_11576} |
|
| 10. | MligTC455_44777 | 598 | 12.45 | Mlig455_065381 | Neo: - Age: logFC(26M/2M)=0.209 |
SPART | 0.955 | - | - | 0.955 | - | - | - | Mlig455_065381 {REF} {Length: 2661} {TRANSSPLICED} {Pfam: Senescence-associated protein [PF06911.14, score=58.7]} {Human: ENSG00000133104, SPART, spartin, [Score=56.2, Expect=9e-08]} {Mouse: ENSMUSG00000036580, Spg20, spastic paraplegia 20, spartin (Troyer syndrome) homolog (human), [Score=100, Expect=9e-22]} {RNA1509_10450} {RNA1310_9098} {RNA815_5367} |
| 11. | MligTC455_45623 | 1805 | 37.6 | Mlig455_037994, Mlig455_038972 | Neo: - Age: - |
ACOX3 | 0.953 | - | - | 0.953 | - | - | - | Mlig455_037994 {REF} {Length: 2587} {TRANSSPLICED} {Pfam: Acyl-CoA oxidase [PF01756.21, score=78.3]; Acyl-CoA dehydrogenase, middle domain [PF02770.21, score=61.0]; Acyl-CoA dehydrogenase, C-terminal domain [PF00441.26, score=29.9]} {Human: ENSG00000087008, ACOX3, acyl-CoA oxidase 3, pristanoyl, [RH, Score=518, Expect=4e-174]} {Mouse: ENSMUSG00000029098, Acox3, acyl-Coenzyme A oxidase 3, pristanoyl, [RH, Score=503, Expect=2e-168]} {Dmel: FBgn0031813, CG9527, [RH, Score=479, Expect=3e-159]} {Celegans: WBGene00019060, acox-3, Acyl-coenzyme A oxidase, [RH, Score=360, Expect=4e-114]} {Smed: dd_Smed_v6_3804_0_1, dd_Smed_v6_3804_0_1, [RH, Score=504, Expect=5e-169]} {RNA1509_14393} {RNA1310_8087.1} {RNA815_5961} Mlig455_038972 {REF} {Length: 3594} {TRANSSPLICED} {Pfam: Acyl-CoA oxidase [PF01756.21, score=77.9]; Acyl-CoA dehydrogenase, middle domain [PF02770.21, score=61.0]; Acyl-CoA dehydrogenase, C-terminal domain [PF00441.26, score=29.9]} {Human: ENSG00000087008, ACOX3, acyl-CoA oxidase 3, pristanoyl, [RH, Score=518, Expect=3e-174]} {Mouse: ENSMUSG00000029098, Acox3, acyl-Coenzyme A oxidase 3, pristanoyl, [RH, Score=503, Expect=8e-169]} {Dmel: FBgn0031813, CG9527, [RH, Score=478, Expect=1e-158]} {Celegans: WBGene00019060, acox-3, Acyl-coenzyme A oxidase, [RH, Score=362, Expect=4e-115]} {Smed: dd_Smed_v6_3804_0_1, dd_Smed_v6_3804_0_1, [RH, Score=505, Expect=2e-169]} {RNA1509_14393} {RNA1310_8087.1, RNA1509_14393} {RNA1509_14393, RNA815_5961} |